Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / proconsortium/proteinontology issues and pull requests

#332 - Term issue: consider new relations for computational assignments

Issue - State: open - Opened by nataled 4 months ago
Labels: Term Request

#331 - Bump requests from 2.31.0 to 2.32.0 in /proapi

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#330 - Bump idna from 2.8 to 3.7 in /proapi

Pull Request - State: open - Opened by dependabot[bot] 6 months ago
Labels: dependencies

#329 - Additional refinements for PRO entry pages

Issue - State: closed - Opened by nataled 6 months ago - 1 comment
Labels: Web Site

#328 - Bump django from 3.2.24 to 3.2.25 in /proapi

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies

#327 - Term issue:

Issue - State: closed - Opened by ValWood 7 months ago - 2 comments
Labels: Term Request

#326 - Term issue: rpb1-(CTD) S5

Issue - State: closed - Opened by ValWood 7 months ago - 4 comments
Labels: Term Request

#325 - Term issue: rpb1 CTD S7 modified

Issue - State: closed - Opened by ValWood 7 months ago - 1 comment
Labels: Term Request

#324 - Term issue: Rpd1 CTD-S5-S7

Issue - State: closed - Opened by ValWood 7 months ago - 3 comments
Labels: Term Request

#323 - Term issue: Spt5 CTD-T1(UnP)

Issue - State: closed - Opened by ValWood 7 months ago - 6 comments
Labels: Term Request

#322 - Refinements needed for PRO entry pages

Issue - State: closed - Opened by nataled 7 months ago - 1 comment
Labels: Web Site

#321 - Term issue: Histone H3 modifications

Issue - State: closed - Opened by ValWood 8 months ago - 3 comments
Labels: Term Request

#320 - Term issue: H3K36me

Issue - State: closed - Opened by ValWood 8 months ago - 5 comments
Labels: Term Request

#319 - Bump django from 2.2.28 to 3.2.24 in /proapi

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies

#318 - PR:000050494

Issue - State: closed - Opened by ValWood 8 months ago - 5 comments

#317 - REST API Synonym Values

Issue - State: closed - Opened by seankim658 8 months ago - 8 comments

#317 - REST API Synonym Values

Issue - State: open - Opened by seankim658 8 months ago - 2 comments

#316 - Term issue: Term issue: rpb1 Phos:CTD-T4 (P36594)

Issue - State: closed - Opened by ValWood 9 months ago - 10 comments
Labels: Term Request

#316 - Term issue: Term issue: rpb1 Phos:CTD-T4 (P36594)

Issue - State: open - Opened by ValWood 9 months ago - 10 comments
Labels: Term Request

#315 - Term issue: rpb1 Phos:CTD-S2 (P36594)

Issue - State: closed - Opened by ValWood 9 months ago - 2 comments
Labels: Term Request

#314 - Bump urllib3 from 1.26.17 to 1.26.18 in /proapi

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago
Labels: dependencies

#313 - Bump urllib3 from 1.26.5 to 1.26.17 in /proapi

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago
Labels: dependencies

#312 - SPARQL service currently unavailable

Issue - State: closed - Opened by allenbaron about 1 year ago - 1 comment
Labels: Web Site

#311 - Duplicate current public page look for new development pages

Issue - State: closed - Opened by nataled about 1 year ago - 3 comments
Labels: Web Site

#310 - Term issue: phosphorylated and unphosphorylated dis1

Issue - State: closed - Opened by manulera about 1 year ago - 2 comments
Labels: Term Request

#309 - Bump certifi from 2022.12.7 to 2023.7.22 in /proapi

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#308 - Bump pygments from 2.7.4 to 2.15.0 in /proapi

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#307 - Term issue: proposed obsoletion: protein-containing material entity

Issue - State: closed - Opened by cmungall about 1 year ago - 2 comments
Labels: Term Request

#306 - Bump requests from 2.21.0 to 2.31.0 in /proapi

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#305 - Term issue: adding terms for the EGFR with bound ligand

Issue - State: closed - Opened by giacomodecolle over 1 year ago - 4 comments
Labels: Term Request

#304 - O94363 rhb1 / SPBC428.16c

Issue - State: closed - Opened by ValWood over 1 year ago - 1 comment
Labels: Term Request

#303 - Term issue: GTP and GTP bound forms of Rag GTPases

Issue - State: closed - Opened by ValWood over 1 year ago - 4 comments
Labels: Term Request

#302 - Term issue: P56286 eukaryotic translation initiation factor 2 subunit alpha

Issue - State: closed - Opened by ValWood over 1 year ago - 1 comment
Labels: Term Request

#301 - Term issue: hhf1 hhf2 hhf3 H4K20me2 modified

Issue - State: closed - Opened by ValWood over 1 year ago - 9 comments
Labels: Term Request

#300 - Remove 'Interactive Sequence View' for Category=polymer

Issue - State: open - Opened by nataled over 1 year ago
Labels: Web Site

#299 - Term issue: Palmytoilation sites of tht1

Issue - State: closed - Opened by manulera over 1 year ago - 7 comments
Labels: Term Request

#298 - APOE for Alzforum

Issue - State: open - Opened by nataled almost 2 years ago

#298 - APOE for Alzforum

Issue - State: open - Opened by nataled almost 2 years ago

#297 - Bump certifi from 2018.11.29 to 2022.12.7 in /proapi

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#297 - Bump certifi from 2018.11.29 to 2022.12.7 in /proapi

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#296 - Implement GPI display for new PRO terms not yet in database

Issue - State: closed - Opened by nataled almost 2 years ago - 4 comments
Labels: Web Site

#296 - Implement GPI display for new PRO terms not yet in database

Issue - State: closed - Opened by nataled almost 2 years ago - 4 comments
Labels: Web Site

#295 - Term issue: Create more Dicty histone mod terms

Issue - State: closed - Opened by nataled almost 2 years ago - 4 comments
Labels: Term Request

#294 - Generate test OWL files from OORT and ROBOT

Issue - State: open - Opened by nataled almost 2 years ago

#294 - Generate test OWL files from OORT and ROBOT

Issue - State: open - Opened by nataled almost 2 years ago

#293 - Term issue: Dicty modified histones

Issue - State: closed - Opened by nataled almost 2 years ago - 30 comments
Labels: Term Request

#292 - Add mechanism to display PRO GPI for single term on web

Issue - State: closed - Opened by nataled almost 2 years ago - 5 comments
Labels: Discuss

#292 - Add mechanism to display PRO GPI for single term on web

Issue - State: closed - Opened by nataled almost 2 years ago - 5 comments
Labels: Discuss

#291 - Create a page with table format for PRO requests

Issue - State: open - Opened by nataled almost 2 years ago

#291 - Create a page with table format for PRO requests

Issue - State: open - Opened by nataled almost 2 years ago

#290 - Term issue: Find RO parent for each PRO-defined relation

Issue - State: open - Opened by nataled almost 2 years ago
Labels: Term Request

#290 - Term issue: Find RO parent for each PRO-defined relation

Issue - State: open - Opened by nataled almost 2 years ago
Labels: Term Request

#289 - Term issue:

Issue - State: closed - Opened by ValWood almost 2 years ago - 5 comments
Labels: Term Request

#288 - Ensure OWL file has UniProtKB and other URIs

Issue - State: open - Opened by nataled almost 2 years ago

#287 - Modify SPARQL query for cleaved proteins

Issue - State: open - Opened by nataled almost 2 years ago

#286 - Term issue: general class for modified proteins

Issue - State: open - Opened by nataled almost 2 years ago
Labels: Term Request

#285 - Term issue: canonical isoform for UniProtKB:P05480 has changed

Issue - State: closed - Opened by nataled about 2 years ago - 10 comments
Labels: Term Request

#285 - Term issue: canonical isoform for UniProtKB:P05480 has changed

Issue - State: closed - Opened by nataled about 2 years ago - 10 comments
Labels: Term Request

#284 - Term issue: O60187/sid4. Ubiquitated

Issue - State: closed - Opened by ValWood about 2 years ago - 5 comments
Labels: Term Request

#283 - PRO Consortium page revision

Issue - State: closed - Opened by nataled about 2 years ago - 3 comments
Labels: Web Site

#282 - Revision needed on "Linking to PRO Terms and Files" page

Issue - State: closed - Opened by nataled about 2 years ago - 1 comment
Labels: Web Site

#281 - Term issue: cnp20-CIM-P and unP forms

Issue - State: closed - Opened by ValWood over 2 years ago - 5 comments
Labels: Term Request

#280 - Term issue: uniquitinated form of Any1

Issue - State: closed - Opened by ValWood over 2 years ago - 1 comment
Labels: Term Request

#279 - Term issue: ADP-ribosylation factor, Arf family Arf6 (GTP-bound)

Issue - State: closed - Opened by ValWood over 2 years ago - 4 comments
Labels: Term Request

#278 - Remove duplicate OMA references

Issue - State: open - Opened by cthoyt over 2 years ago - 1 comment

#277 - Term issue: Phosphosites for alp7 (TACC protein alp7)

Issue - State: closed - Opened by manulera over 2 years ago - 2 comments
Labels: Term Request, Pending

#276 - Term issue: Phospho sites for Rec8 (meiotic cohesin complex kleisin subunit )

Issue - State: closed - Opened by ValWood over 2 years ago - 2 comments
Labels: Term Request

#275 - Term issue: IgN

Issue - State: closed - Opened by rvita over 2 years ago - 3 comments
Labels: Term Request

#274 - PRO documentation: revision of PAF relations

Issue - State: open - Opened by nataled over 2 years ago - 2 comments

#273 - Term issue: SARS-CoV-2 orf9c

Issue - State: closed - Opened by yongqunh over 2 years ago - 2 comments
Labels: Term Request

#272 - Bump django from 2.2.27 to 2.2.28 in /proapi

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#271 - GO Centric View

Issue - State: open - Opened by karenross over 2 years ago - 6 comments
Labels: Web Site

#270 - Bump httpie from 1.0.3 to 3.1.0 in /proapi

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#269 - Term issue: phosphorylated forms for Byr1 and Spk1

Issue - State: closed - Opened by ValWood over 2 years ago - 1 comment
Labels: Term Request

#268 - Bump django from 2.2.24 to 2.2.27 in /proapi

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#267 - Term issue: GTP and GDP bound forms of GTPases

Issue - State: open - Opened by ValWood over 2 years ago - 10 comments
Labels: Term Request, Pending

#266 - Term issue: XBP1 hierarchy issues

Issue - State: closed - Opened by krchristie over 2 years ago - 3 comments
Labels: Term Request

#265 - Term issue: cdc2-Thr167P

Issue - State: open - Opened by ValWood almost 3 years ago - 3 comments
Labels: Term Request, Pending

#264 - PR:000000164 discrepency?

Issue - State: closed - Opened by wmmounts almost 3 years ago - 8 comments

#263 - Term issue:

Issue - State: closed - Opened by ValWood almost 3 years ago - 2 comments
Labels: Term Request

#262 - Term issue: gene level parent term for Spata33 organism-gene terms

Issue - State: closed - Opened by krchristie almost 3 years ago - 7 comments
Labels: Term Request

#261 - Term GTP and GDP bound forms of S. pombe Cdc42

Issue - State: closed - Opened by ValWood almost 3 years ago - 6 comments
Labels: Term Request

#259 - Generate a ranked list of modifications that need colors; provide PRO examples

Issue - State: open - Opened by nataled about 3 years ago - 4 comments

#258 - tif211 Term issue:

Issue - State: closed - Opened by ValWood about 3 years ago - 2 comments
Labels: Term Request

#257 - Need for a file with MOD mappings

Issue - State: open - Opened by nataled about 3 years ago - 10 comments

#256 - MSA for terms that are unmodified at a specific position - how to display

Issue - State: open - Opened by nataled about 3 years ago - 2 comments
Labels: Web Site

#255 - Dynamic term request: Q5SZ99

Issue - State: closed - Opened by krchristie about 3 years ago - 4 comments
Labels: Term Request

#254 - Term issue: pxl1 new terms

Issue - State: closed - Opened by ValWood about 3 years ago - 1 comment
Labels: Term Request

#253 - Term issue: NTR for Gtr1 and Gtr2 GTPases

Issue - State: closed - Opened by ValWood about 3 years ago - 1 comment
Labels: Term Request

#252 - Potential issue with accession_status.dat processing

Issue - State: closed - Opened by nataled about 3 years ago - 1 comment

#251 - Which format to use as default at BioPortal?

Issue - State: open - Opened by nataled over 3 years ago
Labels: Policy, Discuss

#250 - Bump django from 1.11.29 to 2.2.24 in /proapi

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#249 - Need to do URI updates for pro-reasoned.obo

Issue - State: closed - Opened by nataled over 3 years ago - 1 comment

#248 - Using the PRO-proteoform-std line instead of the definition line by default

Issue - State: open - Opened by nataled over 3 years ago - 1 comment

#247 - Multiple PRO-proteoform-std

Issue - State: closed - Opened by Julie-Cowart over 3 years ago - 11 comments
Labels: Web Site, Discuss

#246 - Term issue: gad8-P

Issue - State: closed - Opened by ValWood over 3 years ago - 1 comment
Labels: Term Request

#245 - Term issue: Histone H4

Issue - State: closed - Opened by ValWood over 3 years ago - 4 comments
Labels: Term Request

#244 - Bump urllib3 from 1.24.2 to 1.26.5 in /proapi

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#243 - Term issue: psm3 acetylated form

Issue - State: closed - Opened by ValWood over 3 years ago - 2 comments
Labels: Term Request