GitHub / cmungall issue stats
Total issues: 2,094
Total pull requests: 1,115
Merged pull request: 935
Average time to close issues: over 1 year
Average time to close pull requests: about 1 month
Average comments per issue: 2.22
Average comments per pull request: 0.65
Issues created
- EnvironmentOntology/envo: 278
- cmungall/go-test: 200
- linkml/linkml: 181
- cmungall/sf-test: 100
- incatools/ontology-access-kit: 55
- monarch-initiative/monarch-disease-ontology-retired: 41
- monarch-initiative/mondo: 38
- monarch-initiative/biolink-api: 36
- biopragmatics/bioregistry: 33
- biolink/kgx: 31
- geneontology/obographs: 29
- monarch-initiative/owlsim-v3: 29
- phenopackets/phenopacket-reference-implementation: 28
- INCATools/kgcl-rdflib: 27
- INCATools/kgcl: 26
- obofoundry/cob: 20
- biolink/biolinkml: 20
- ontodev/robot: 19
- monarch-initiative/monochrom: 17
- cmungall/sf-test2: 17
- incatools/ontology-development-kit: 17
- monarch-initiative/aurelian: 17
- INCATools/dead_simple_owl_design_patterns: 16
- cmungall/biocaddie-gym: 15
- incatools/dosdp-tools: 15
- linkml/schema-automator: 14
- biopragmatics/obo-db-ingest: 13
- GenomicsStandardsConsortium/mixs: 12
- cmungall/kboom-paper: 12
- geneontology/neo: 12
- incatools/fantom5-ontology: 12
- obofoundry/obofoundry.github.io: 11
- incatools/biosample-analysis: 11
- linkml/schemasheets: 11
- biopragmatics/pyobo: 11
- EcologicalSemantics/ecocore: 11
- incatools/semantic-sql: 11
- knowledge-graph-hub/kg-microbe: 10
- linkml/owlstar: 10
- ian-andrich/PythonPengines: 10
- microbiomedata/nmdc-schema: 10
- linkml/linkml-owl: 10
- monarch-initiative/dipper: 10
- linkml/linkml-project-cookiecutter: 9
- SDG-InterfaceOntology/sdgio: 9
- EnvironmentOntology/gaz: 9
- althonos/pronto: 9
- geneontology/noctua: 9
- mapping-commons/sssom-py: 8
- monarch-initiative/ontogpt: 8
- microbiomedata/sample-annotator: 8
- INCATools/obographviz: 8
- monarch-initiative/curategpt: 8
- ESIPFed/sweet: 8
- geneontology/amigo: 8
- phenopackets/phenopacket-schema: 8
- microbiomedata/pilot: 7
- monarch-initiative/ontorunner: 7
- mapping-commons/sssom: 7
- monarch-initiative/pheval.llm: 6
- monarch-initiative/semsimian: 6
- cmungall/omb: 6
- monarch-initiative/geno-ontology: 6
- berkeleybop/artificial-intelligence-ontology: 6
- monarch-initiative/monarch-project-template: 6
- monarch-initiative/monarch-cypher-queries: 6
- biolink/biolink-model: 6
- obi-ontology/obi: 6
- monarch-initiative/mondo-ingest: 5
- simonw/llm: 5
- jervenbolleman/faldo-paper: 5
- linkml/linkml-model: 5
- berkeleybop/berkeleybop.github.io: 5
- incatools/boomer: 5
- monarch-initiative/phenio: 5
- planteome/plant-experimental-conditions-ontology: 5
- pyobo/pyobo: 5
- AgriculturalSemantics/agro: 5
- monarch-initiative/oai-monarch-plugin: 5
- cmungall/gosf2github: 4
- foodontology/foodon: 4
- monarch-initiative/monarch-mme: 4
- incatools/ubergraph: 4
- jannahastings/py-horned-owl: 4
- microbiomedata/metadata_converter: 4
- cmungall/nlx-pl: 4
- evidenceontology/evidenceontology: 4
- berkeleybop/class-expression: 4
- monarch-initiative/mapping-walker: 4
- berkeleybop/bbop-js: 4
- ihh/bracery: 4
- monarch-initiative/curate-gpt: 4
- cmungall/fake-obo-review: 4
- bio-ontology-research-group/unit-ontology: 4
- linkml/prefixmaps: 4
- EBISPOT/zooma: 4
- incatools/relation-graph: 4
- turbomam/scoped-mapping: 4
- timsbiomed/tccm-model: 4
- monarch-initiative/phenopacket-store: 4
- cmungall/yaml-ontology-metalanguage: 4
- geneontology/wc-gocam-viz: 3
- balhoff/blazegraph-runner: 3
- incatools/oakx-grape: 3
- owlcs/owlapi: 3
- dictybase/migration-data: 3
- cmungall/blipkit: 3
- texworld/betterbib: 3
- pato-ontology/pato: 3
- obo-behavior/behavior-ontology: 3
- obofoundry/obo-dashboard: 3
- incatools/ontobot-change-agent: 3
- linkml/linkml-runtime: 3
- chemkg/chemrof: 3
- geneontology/go-ontology: 3
- monarch-initiative/maxo: 3
- linkml/linkml-store: 3
- monarch-initiative/vertebrate-breed-ontology: 3
- monarch-initiative/disease-miner: 3
- NCATS-Tangerine/tkbio: 3
- maastrichtu-ids/semanticscience: 3
- monarch-initiative/organoid-registry: 3
- incatools/intelligent-concept-assistant: 3
- philzook58/snakelog: 3
- planteome/co_322-maize-traits: 3
- cmungall/linkml-cfde: 2
- monarch-initiative/monarchr: 2
- EnvironmentOntology/envo-p: 2
- incatools/ontology-term-usage: 2
- cthoyt/pystow: 2
- incatools/whelk-rs: 2
- linkml/rda-crosswalk: 2
- hrshdhgd/CoderGPT: 2
- planteome/plant-stress-ontology: 2
- oboacademy/obook: 2
- hsolbrig/jsonasobj2: 2
- cthoyt/class-resolver: 2
- insect-morphology/aism: 2
- jannahastings/mental-functioning-ontology: 2
- planteome/co_320-rice-traits: 2
- RDFLib/rdflib: 2
- dalito/ucumvert: 2
- cmungall/ncit: 2
- planteome/plant-trait-ontology: 2
- ozekik/lightrdf: 2
- phillord/horned-owl: 2
- linkml/linkml-solr: 2
- linkml/linkml-map: 2
- globalbioticinteractions/globalbioticinteractions: 2
- monarch-initiative/synonymizer: 2
- pkalita-lbl/oak-api: 2
- AnacletoLAB/ensmallen: 2
- berkeleybop/bbop-graph: 2
- cthoyt/orcidio: 2
- insect-morphology/lepao: 2
- microbiomedata/gold-ontology-translation: 2
- cthoyt/obo-relations-interactions: 2
- cthoyt/ontoportal-client: 2
- monarch-initiative/pheval.template: 2
- doctorbud/tableview-workbench: 2
- EnvironmentOntology/environmental-exposure-ontology: 2
- cthoyt/curies: 2
- rsc-ontologies/rsc-cmo: 1
- southern-cross-plant-science/cdno: 1
- monarch-initiative/sepio-ontology: 1
- prefixcommons/curie-util: 1
- globalbioticinteractions/globalbioticinteractions.github.io: 1
- phenoscape/phenoscape-owl-tools: 1
- cmungall/obo-shapes: 1
- gsakkis/pytrie: 1
- stefankoegl/python-json-patch: 1
- microbiomedata/nmdc-runtime: 1
- io-informatics/jackson-jsonld: 1
- tdwg/gbwg: 1
- omnisearch/ncro: 1
- databiosphere/consent-data-use: 1
- microbiomedata/workflowplanning: 1
- cmungall/term-broker: 1
- obophenotype/hpo-translations: 1
- biopragmatics/curies: 1
- okdistribute/jsonschema-protobuf: 1
- cmungall/term-enrichment-protocol: 1
- simonw/llm-openrouter: 1
- cmungall/multi-axial-ontology-test: 1
- monarch-initiative/monarch-py: 1
- cmungall/sweet-obo-alignment: 1
- cmungall/tbn-go-python-lib: 1
- monarch-initiative/monarch-mapping-commons: 1
- incatools/rdf-sql-bulkloader: 1
- cmungall/chemessence: 1
- berkeleybop/golr-schema: 1
- biopragmatics/biomappings: 1
- balhoff/owl-to-rules: 1
- rat-genome-database/cmo-clinical-measurement-ontology: 1
- incatools/neoplasmer: 1
- repronim/reproschema: 1
- prefixcommons/prefixcommons-py: 1
- renaud/neuroNER: 1
- monarch-initiative/mondolib: 1
- jaydchan/tawny-karyotype: 1
- gouttegd/grainyhead: 1
- gyorilab/pybiopax: 1
- biolink/biolink-model-toolkit: 1
- Phenomics/ontolib: 1
- combat-tb/combattbmodel: 1
- monarch-initiative/maxo-annotations: 1
- RDFLib/sparqlwrapper: 1
- ropensci/traits: 1
- monarch-initiative/fenominal: 1
- incatools/tetool: 1
- linkml/linkml-runtime.js: 1
- block/goose: 1
- balhoff/ultimate-ontology-makefile: 1
- bio-ontology-research-group/oboconsistencytest: 1
- microbiomedata/nmdc-ontology: 1
- NCATS-Tangerine/mvp-module-library: 1
- realmarcin/mak_results: 1
- hsolbrig/PyShEx: 1
- monarch-initiative/monarch-owlsim-data: 1
- monarch-initiative/pheval.exomiser: 1
- exomiser/Exomiser: 1
- berkeleybop/kgviz-model: 1
- hsolbrig/rdflib-shim: 1
- monarch-initiative/kboom: 1
- monarch-initiative/monarch-app: 1
- kpfleming/jinjanator: 1
- cmungall/bio-chebi: 1
- monarch-initiative/phenomics-assistant: 1
- hsolbrig/pyjsg: 1
- protegeproject/webprotege: 1
- geneontology/go-stats: 1
- jannahastings/emotion-ontology: 1
- monarch-initiative/gpsea: 1
- microbiomedata/nmdc-server: 1
- diatomsRcool/include_schema: 1
- cmungall/owljs: 1
- dhimmel/obonet: 1
- cido-ontology/cido: 1
- linkml/linkml-registry: 1
- kbairak/pipepy: 1
- stevencox/greentranslator: 1
- cmungall/wikidata_ontomatcher: 1
- fastobo/fastobo-graphs: 1
- commoncoreontology/commoncoreontologies: 1
- harelba/q: 1
- monarch-initiative/ingest-artifacts: 1
- cmungall/capital-offence: 1
- geneontology/protege-taxon-constraints: 1
- pkalita-lbl/linkml-initializer: 1
- mschubert/python-obo: 1
- cmungall/pldbc: 1
- cmungall/sparqlprog: 1
- monarch-initiative/phenol: 1
- simonw/files-to-prompt: 1
- EnvironmentOntology/envo-habitats: 1
- stain/owl2jsonld: 1
- fastobo/fastobo-py: 1
- ontodev/tsvalid: 1
- broadinstitute/broad-translator: 1
- hdmf-dev/hdmf: 1
- simonw/llm-replicate: 1
- cmungall/intervaldb: 1
- dagrejs/graphlib-dot: 1
- incatools/term-expando: 1
- tanghaibao/goatools: 1
- geneontology/syngo2lego: 1
- stain/owlapi-jsonld: 1
- ihh/biomake-appnote: 1
- basin-3d/basin3d: 1
- cmungall/json-flattener: 1
- linkml/linkml-validator: 1
- OpenEnergyPlatform/ontology: 1
- proconsortium/proteinontology: 1
- monarch-initiative/phenopacket2prompt: 1
- biocypher/biochatter-light: 1
- incatools/environments2wikidata: 1
- berkeleybop/bbop-manager-golr: 1
Pull requests created
- linkml/linkml: 146
- linkml/linkml-model: 92
- incatools/ontology-access-kit: 88
- EnvironmentOntology/envo: 79
- linkml/linkml-runtime: 59
- incatools/semantic-sql: 41
- linkml/linkml-store: 36
- linkml/schema-automator: 30
- monarch-initiative/biolink-api: 24
- monarch-initiative/ontogpt: 24
- monarch-initiative/aurelian: 24
- linkml/schemasheets: 23
- biolink/biolinkml: 21
- linkml/linkml-owl: 21
- INCATools/kgcl: 15
- geneontology/neo: 15
- INCATools/kgcl-rdflib: 15
- linkml/linkml-map: 14
- linkml/linkml-project-cookiecutter: 13
- obofoundry/cob: 10
- prefixcommons/prefixcommons-py: 10
- monarch-initiative/mondo: 9
- monarch-initiative/curategpt: 9
- SDG-InterfaceOntology/sdgio: 8
- linkml/prefixmaps: 8
- phenopackets/phenopacket-schema: 8
- linkml/linkml-dataops: 7
- cmungall/linkml-phenopackets: 7
- ontodev/robot: 7
- monarch-initiative/owlsim-v3: 6
- incatools/oakx-grape: 6
- geneontology/amigo: 6
- chemkg/chemrof: 6
- microbiomedata/sample-annotator: 6
- microbiomedata/nmdc-schema: 5
- geneontology/obographs: 5
- biolink/kgx: 5
- ian-andrich/PythonPengines: 5
- linkml/linkml-renderer: 5
- phenopackets/phenopacket-reference-implementation: 5
- planteome/plant-experimental-conditions-ontology: 5
- berkeleybop/berkeleybop.github.io: 4
- linkml/linkml-solr: 4
- incatools/rdf-sql-bulkloader: 4
- chemkg/c3p: 4
- berkeleybop/kgviz-model: 4
- linkml/linkml-registry: 4
- berkeleybop/artificial-intelligence-ontology: 4
- GenomicsStandardsConsortium/mixs: 3
- monarch-initiative/monarch-project-template: 3
- monarch-initiative/dragon-ai-results: 3
- cmungall/obo-shapes: 3
- knowledge-graph-hub/kg-microbe: 3
- linkml/linkml-arrays: 3
- cmungall/json-flattener: 3
- obofoundry/obofoundry.github.io: 3
- monarch-initiative/monarch-cypher-queries: 3
- monarch-initiative/llm-matrix: 3
- simonw/llm: 3
- monarch-initiative/curate-gpt: 3
- linkml/sparqlfun: 3
- cthoyt/curies: 2
- dictybase/migration-data: 2
- cmungall/sparqlprog: 2
- cidgoh/DataHarmonizer: 2
- planteome/planteome-inca-form: 2
- cmungall/linkml-cfde: 2
- semantalytics/awesome-semantic-web: 2
- bioperl/Bio-FeatureIO: 2
- cmungall/go-db: 2
- planteome/co_320-rice-traits: 2
- monarch-initiative/monochrom: 2
- monarch-initiative/oai-monarch-plugin: 2
- incatools/boomer: 2
- INCATools/dead_simple_owl_design_patterns: 2
- monarch-initiative/phenomics-assistant: 2
- dagrejs/graphlib-dot: 2
- monarch-initiative/pheval.llm: 2
- INCATools/obographviz: 2
- biopragmatics/pyobo: 2
- osfclient/osfclient: 2
- hsolbrig/pyjsg: 2
- ESIPFed/sweet: 2
- linkml/cmdr: 2
- ihh/biomake-appnote: 2
- cmungall/linkml-gocam: 2
- balhoff/blazegraph-runner: 1
- monarch-initiative/monarch-owlsim-data: 1
- berkeleybop/bbop-manager-golr: 1
- simonw/llm-openrouter: 1
- uberon/uberon.github.io: 1
- ihh/wtfgenes-paper: 1
- cmungall/pheno_odk_test: 1
- hsolbrig/jsonasobj2: 1
- incatools/ontology-development-kit: 1
- jokergoo/simona: 1
- monarch-initiative/koza: 1
- incatools/dosdp-tools: 1
- monarch-initiative/babelon: 1
- EnvironmentOntology/gaz: 1
- EnvironmentOntology/envo-p: 1
- linkml/linkml-datalog: 1
- biopragmatics/bioregistry: 1
- doctorbud/graphviz-viewer: 1
- mapping-commons/sssom-py: 1
- AnacletoLAB/ensmallen: 1
- ttencate/sf2github: 1
- monarch-initiative/pheval.template: 1
- basin-3d/basin3d: 1
- monarch-initiative/mondolib: 1
- monarch-initiative/dipper: 1
- monarch-initiative/dragon-ai-cookiecutter: 1
- obofoundry/obo-dashboard: 1
- EcologicalSemantics/ecocore: 1
- balhoff/whelk: 1
- monarch-initiative/ontorunner: 1
- tdwg/gbwg: 1
- oboacademy/obook: 1
- pkalita-lbl/linkml-initializer: 1
- jervenbolleman/faldo-paper: 1
- cmungall/mixs-source: 1
- microbiomedata/geoloc-tools: 1
- monarch-initiative/monarch-disease-ontology-retired: 1
- dhimmel/obonet: 1
- balhoff/dt-query-federation: 1
- cthoyt/ontoportal-client: 1
- biolink/biolink-model: 1
- phenoscape/phenoscape-owl-tools: 1
- cmungall/venomx: 1
- incatools/oakx-robot: 1
- ozekik/awesome-ontology: 1
- NCATS-Tangerine/tkbio: 1
- obi-ontology/obi: 1
- monarch-initiative/HpoTextMining: 1
- cthoyt/class-resolver: 1
- drseb/phenopposites: 1
- cmungall/envo-variable-parser: 1
- hsolbrig/PyShEx: 1
- incatools/biosample-analysis: 1
- jannahastings/py-horned-owl: 1
- exomiser/Exomiser: 1
- berkeleybop/obo-models: 1
- microbiomedata/metadata-for-user-facility-template-transformations: 1
- matentzn/omop-linkml: 1
- cmungall/edd-schema: 1
- monarch-initiative/sepio-ontology: 1
- cmungall/gold-ontology: 1
- monarch-initiative/closurizer: 1
- incatools/whelk-rs: 1
- planteome/plant-stress-ontology: 1
- matentzn/trait-phenotype-ontology-patterns: 1
- contextualizer-ai/landuse-mcp: 1
- monarch-initiative/phenopacket-store: 1
- fralau/mkdocs-mermaid2-plugin: 1
- gyorilab/gilda: 1
- jervenbolleman/ensembl-r2rml: 1
Maintainer
- EnvironmentOntology/envo: 357
- linkml/linkml: 327
- cmungall/go-test: 200
- incatools/ontology-access-kit: 143
- cmungall/sf-test: 100
- linkml/linkml-model: 97
- linkml/linkml-runtime: 62
- monarch-initiative/biolink-api: 60
- incatools/semantic-sql: 52
- monarch-initiative/mondo: 47
- linkml/schema-automator: 44
- monarch-initiative/monarch-disease-ontology-retired: 42
- INCATools/kgcl-rdflib: 42
- monarch-initiative/aurelian: 41
- linkml/linkml-store: 39
Active Maintainer
- monarch-initiative/aurelian: 41
- incatools/ontology-access-kit: 25
- linkml/linkml: 23
- linkml/linkml-store: 19
- EnvironmentOntology/envo: 15
- incatools/semantic-sql: 8
- monarch-initiative/curategpt: 7
- linkml/linkml-runtime: 6
- linkml/linkml-model: 6
- linkml/schemasheets: 5
- monarch-initiative/mondo: 5
- chemkg/c3p: 4
- monarch-initiative/llm-matrix: 3
- geneontology/noctua: 3
- berkeleybop/artificial-intelligence-ontology: 3
Issue Author Associations
- Member (1,008, 48.14%)
- Owner (388, 18.53%)
- Contributor (319, 15.23%)
- Collaborator (218, 10.41%)
- None (161, 7.69%)
Pull Request Author Associations
- Member (750, 67.26%)
- Collaborator (190, 17.04%)
- Contributor (140, 12.56%)
- Owner (27, 2.42%)
- None (8, 0.72%)
Top Issue Labels
- auto-migrated (171)
- enhancement (125)
- low priority (74)
- sourceforge (55)
- bug (46)
- Request: New ontology term (37)
- documentation (37)
- question (21)
- high priority (18)
- generator-misc (18)
- Existing term revisions (18)
- Plant Treatment (18)
- good first issue (17)
- generator-pydantic (16)
- help wanted (14)
Top Pull Request Labels
- enhancement (4)
- axiomatization (2)
- generator-pydantic (2)
- realm (1)
- release (1)
- mapping (1)
- refactor (1)
- bug (1)
- documentation (1)
- help wanted (1)
- good first issue (1)