Ecosyste.ms: Issues

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GitHub / cthoyt issue stats

Total issues: 1,038
Total pull requests: 1,328
Merged pull request: 1,156
Average time to close issues: 4 months
Average time to close pull requests: about 1 month
Average comments per issue: 0.95
Average comments per pull request: 0.94

Issues created

bel-commons/bel-commons: 77
pybel/pybel-tools: 75
biopragmatics/pyobo: 61
biopragmatics/bioregistry: 45
pyobo/pyobo: 40
pybel/pybel: 34
y0-causal-inference/y0: 32
bio2bel/expasy: 27
bio2bel/bio2bel: 26
ComPath/ComPath: 21
ComPath/compath-resources: 17
cthoyt/cookiecutter-snekpack: 16
bio2bel/mirtarbase: 15
r-costa/sbml2hyb: 14
biopragmatics/biomappings: 13
PathwayMerger/PathMe: 13
linkml/prefixmaps: 12
biopragmatics/bioversions: 11
cthoyt/cthoyt.github.io: 10
bio2bel/interpro: 10
sorgerlab/famplex: 10
cebel/pyuniprot: 10
scolby33/easy_config: 10
Kohulan/DECIMER-Image_Transformer: 10
ndexbio/ndex2-client: 9
AstraZeneca/chemicalx: 9
mapping-commons/sssom-py: 9
SmartDataAnalytics/BioKEEN: 8
bio2bel/mirbase: 8
indralab/gilda: 8
sorgerlab/indra: 8
biopragmatics/curies: 8
cthoyt/curies: 8
cthoyt/pystow: 8
OpenBioLink/OpenBioLink: 7
obofoundry/obo-dashboard: 6
bio2bel/chebi: 6
bio2bel/hgnc: 6
mapping-commons/sssom: 6
drug2ways/drug2ways: 6
AstraZeneca/rexmex: 5
cebel/pyctd: 5
obofoundry/cob: 5
ontodev/robot: 5
gyorilab/gilda: 5
obofoundry/obofoundry.github.io: 5
bio2bel/kegg: 5
bio2bel/go: 5
althonos/pronto: 4
ComPath/ComPath-Utils: 4
jose-manuel/npfc: 4
cthoyt/curies4j: 4
cthoyt/orcidio: 4
cthoyt/obo-community-health: 4
ComPath/ComPath-HGNC: 4
MobleyLab/GuthrieSolv: 4
cthoyt/class-resolver: 4
geneontology/obographs: 4
bio2bel/wikipathways: 4
bio2bel/reactome: 4
bel-enrichment/bel-enrichment: 4
pybel/bel-repository: 4
bio2bel/drugbank: 4
cthoyt/authorship: 3
cthoyt/selventa-knowledge: 3
KramerChristian/NonadditivityAnalysis: 3
neurommsig-epilepsy/neurommsig-epilepsy: 3
biopragmatics/oquat: 3
ratvec/ratvec: 3
bio2bel/uniprot: 3
bio2bel/mesh: 3
cthoyt/autoreviewer: 3
bio2bel/famplex: 3
bio2bel/entrez: 3
vemonet/rdflib-endpoint: 2
pybel/pybel-cx: 2
pybel/pybel-jupyter: 2
foodontology/foodon: 2
bel2scm/bel2scm: 2
indralab/adeft: 2
mberr/torch-max-mem: 2
monarch-initiative/embiggen: 2
y0-causal-inference/y0-bio: 2
cthoyt/zenodo-client: 2
RECETOX/RIAssigner: 2
AnacletoLAB/grape: 2
gbv/bartoc.org: 2
superraptor/gsso: 2
Knowledge-Graph-Hub/universalizer: 2
reymond-group/drfp: 2
Steinbeck-Lab/cheminformatics-microservice: 2
gyorilab/adeft: 2
gyorilab/emmaa: 2
chembl/chembl_webresource_client: 2
obofoundry/obo-nor.github.io: 2
brenda-enzymes/bto: 2
cthoyt/ols-client: 2
dhimmel/obonet: 2
rsc-ontologies/rsc-cmo: 2
VHRanger/nodevectors: 2
lambdamusic/Ontospy: 2
omnisearch/ncro: 2
evidenceontology/evidenceontology: 2
manubot/manubot: 2
indralab/emmaa: 2
rsc-ontologies/rxno: 2
flora-phenotype-ontology/flopoontology: 2
indralab/protmapper: 2
scolby33/pushover_complete: 2
planteome/plant-trait-ontology: 2
biopragmatics/biolookup: 2
cebel/pyhgnc: 2
pykeen/pykeen: 2
biolink/biolink-model: 2
incatools/ontology-development-kit: 2
sva-se/hso: 1
jannahastings/emotion-ontology: 1
txpo-ontology/txpo: 1
obophenotype/planarian-phenotype-ontology: 1
ino-ontology/ino: 1
planteome/plant-experimental-conditions-ontology: 1
oboacademy/obook: 1
jannahastings/mental-functioning-ontology: 1
openlhs/labo: 1
cthoyt/schoolwork: 1
rat-genome-database/cmo-clinical-measurement-ontology: 1
rat-genome-database/pw-pathway-ontology: 1
insect-morphology/aism: 1
rat-genome-database/xco-experimental-condition-ontology: 1
rat-genome-database/mmo-measurement-method-ontology: 1
cido-ontology/cido: 1
opmi/opmi: 1
ebispot/ols4: 1
phi-base/phipo: 1
pato-ontology/pato: 1
display-lab/psdo: 1
obophenotype/xenopus-phenotype-ontology: 1
glygen-glycan-data/gnome: 1
planteome/plant-stress-ontology: 1
bio-ontology-research-group/unit-ontology: 1
ebispot/clyh_ontology: 1
proconsortium/proteinontology: 1
ebispot/amphx_ontology: 1
obophenotype/dicty-phenotype-ontology: 1
obophenotype/zebrafish-phenotype-ontology: 1
DeepGraphLearning/torchdrug: 1
safisher/ornaseq: 1
biolink/kgx: 1
INCATools/kgcl: 1
pcastellanoescuder/foodbiomarkerontology: 1
berkeleybop/artificial-intelligence-ontology: 1
cthoyt/pybacting: 1
PathwayMerger/PathMe-Viewer: 1
scholrly/orcid-python: 1
biolink/ontobio: 1
callahantiff/OMOP2OBO: 1
linkml/linkml-model: 1
dobraczka/kiez: 1
hemekg/hemekg: 1
GuiltyTargets/guiltytargets: 1
cthoyt/geometric-graphs: 1
HunterMcGushion/docstr_coverage: 1
phanein/deepwalk: 1
Cojabi/DataComp: 1
pharmacome/conib: 1
pedemonte96/causaleffect: 1
bio2bel/hmdd: 1
belbio/bel: 1
v0lta/PyTorch-Wavelet-Toolbox: 1
click-contrib/sphinx-click: 1
mims-harvard/TDC: 1
swansonk14/p_tqdm: 1
mbr/flask-bootstrap: 1
python-cachier/cachier: 1
scijava/scyjava: 1
snap-stanford/ogb: 1
rusty1s/pytorch_scatter: 1
twolfson/restructuredtext-lint: 1
EnvironmentOntology/envo: 1
EcologicalSemantics/ecocore: 1
incatools/ontology-access-kit: 1
ihcc-cohorts/gecko: 1
clinicaltrialontology/cto: 1
luis-gonzalez-m/collembola: 1
nuriaqueralt/covid19-epidemiology-ontology: 1
chemkg/chemrof: 1
ebi-biomodels/sbo: 1
ontoneo-project/ontoneo: 1
AgriculturalSemantics/agro: 1
rat-genome-database/RS-Rat-Strain-Ontology: 1
SpeciesFileGroup/nomen: 1
EnvironmentOntology/environmental-exposure-ontology: 1
EnvironmentOntology/gaz: 1
INCATools/obographviz: 1
OlivierBeq/Papyrus-scripts: 1
LucaCappelletti94/pubmed_embedding: 1
ccb-hms/ontology-mapper: 1
ahida-development/ols-py: 1
biopragmatics/debio: 1
cthoyt/ontoportal-client: 1
Thakar-Lab/WikiNetworks: 1
cthoyt/umls_downloader: 1
mbr/tinydb-git: 1
stonkgs/stonkgs: 1
stellargraph/stellargraph: 1
FunctionLab/selene: 1
saezlab/pypath: 1
Sujit-O/pykg2vec: 1
cthoyt/pydeogram: 1

Pull requests created

y0-causal-inference/y0: 109
biopragmatics/bioregistry: 104
biopragmatics/pyobo: 80
biopragmatics/curies: 78
cthoyt/curies: 75
biopragmatics/biomappings: 66
pyobo/pyobo: 48
gyorilab/gilda: 43
mapping-commons/sssom-py: 41
pybel/pybel: 39
cthoyt/cthoyt.github.io: 39
cthoyt/pystow: 34
indralab/gilda: 26
AstraZeneca/chemicalx: 25
cthoyt/class-resolver: 25
sorgerlab/famplex: 19
linkml/prefixmaps: 16
sorgerlab/indra: 15
AstraZeneca/rexmex: 15
biopragmatics/bioversions: 12
v0lta/PyTorch-Wavelet-Toolbox: 12
bio2bel/bio2bel: 10
pybel/pybel-tools: 10
indralab/pybiopax: 10
biopragmatics/bioontologies: 10
cthoyt/cookiecutter-snekpack: 10
indralab/adeft: 8
scolby33/easy_config: 8
gyorilab/adeft: 8
biopragmatics/biolookup: 8
cthoyt/zenodo-client: 7
OpenBioLink/OpenBioLink: 7
cthoyt/quickstatements_client: 6
indralab/emmaa: 6
PathwayMerger/PathMe: 6
mapping-commons/sssom: 6
ComPath/compath-resources: 6
obofoundry/obo-dashboard: 6
gyorilab/emmaa: 6
obofoundry/obofoundry.github.io: 6
cthoyt/umls_downloader: 5
biopragmatics/oquat: 5
bel-commons/bel-commons: 5
stonkgs/stonkgs: 5
cebel/pyctd: 5
bel2scm/bel2scm: 5
Kohulan/DECIMER-Image_Transformer: 4
mberr/torch-ppr: 4
pykeen/pykeen: 4
incatools/ontology-access-kit: 4
indralab/protmapper: 4
cthoyt/geometric-graphs: 4
bio2bel/wikipathways: 4
planteome/plant-trait-ontology: 4
KramerChristian/NonadditivityAnalysis: 4
dobraczka/kiez: 4
prefixcommons/prefixcommons-py: 4
FAIRplus/the-fair-cookbook: 4
cthoyt/pybacting: 3
SuLab/WikidataIntegrator: 3
brenda-enzymes/bto: 3
rsc-ontologies/rsc-cmo: 3
python-cachier/cachier: 3
ndexbio/ndex2-client: 3
oboacademy/obook: 3
nuriaqueralt/covid19-epidemiology-ontology: 3
cthoyt/ontoportal-client: 3
cthoyt/ols-client: 3
scolby33/pushover_complete: 3
cthoyt/autoreviewer: 3
bio2bel/kegg: 3
bio2bel/reactome: 3
planteome/plant-experimental-conditions-ontology: 3
vemonet/rdflib-endpoint: 3
EnvironmentOntology/envo: 3
SmartDataAnalytics/BioKEEN: 3
pybel/bel-repository: 2
obo-behavior/behavior-ontology: 2
obofoundry/cob: 2
ComPath/ComPath-Utils: 2
rusty1s/pytorch_scatter: 2
LucaCappelletti94/pygifsicle: 2
HunterMcGushion/docstr_coverage: 2
evidenceontology/evidenceontology: 2
bel-enrichment/bel-enrichment: 2
helloflask/bootstrap-flask: 2
bio2bel/hgnc: 2
DeepGraphLearning/torchdrug: 2
biopragmatics/debio: 2
drug2ways/drug2ways: 2
cthoyt/more_click: 2
rdkit/rdkit: 2
pharmacome/conib: 2
phanein/deepwalk: 2
VHRanger/CSRGraph: 2
jrwnter/cddd: 2
linkml/linkml-runtime: 2
rat-genome-database/xco-experimental-condition-ontology: 2
related-sciences/nxontology: 2
y0-causal-inference/y0-bio: 2
dhimmel/obonet: 2
chembl/chembl_webresource_client: 2
regebro/pyroma: 2
fxcoudert/tools: 2
cebel/pyuniprot: 2
obophenotype/human-phenotype-ontology: 1
pybel/pybel-cx: 1
obophenotype/provisional_cell_ontology: 1
obophenotype/dicty-phenotype-ontology: 1
ArshSekhon/pubtator_loader: 1
manubot/manubot: 1
obofoundry/obo-nor.github.io: 1
LucaCappelletti94/downloaders: 1
AgriculturalSemantics/agro: 1
FunctionLab/selene: 1
zqfang/GSEApy: 1
Emiller88/Mastodon-Bioinformatics: 1
bio2bel/mirtarbase: 1
Cojabi/DataComp: 1
INCATools/kgcl: 1
spookylukey/table-format: 1
VHRanger/nodevectors: 1
opmi/opmi: 1
bio2bel/expasy: 1
scijava/scyjava: 1
LucaCappelletti94/pubmed_embedding: 1
incatools/ontology-development-kit: 1
mbr/flask-bootstrap: 1
cthoyt/selventa-knowledge: 1
insect-morphology/aism: 1
mlakewood/hypo_schema: 1
scijava/jgo: 1
MobleyLab/GuthrieSolv: 1
monarch-initiative/embiggen: 1
dashea/requests-file: 1
cyang0128/nutritional-epidemiologic-ontologies: 1
RDFLib/rdflib: 1
biopragmatics/obo-db-ingest: 1
BojarLab/glycowork: 1
corenting/immutabledict: 1
insect-morphology/lepao: 1
cthoyt/biomodels-metadata-analysis: 1
cthoyt/pyrdle: 1
bio2bel/chebi: 1
insect-morphology/colao: 1
cthoyt/fairsharing-client: 1
openlhs/labo: 1
rat-genome-database/mmo-measurement-method-ontology: 1
adelenelai/onglai-classify-homologues: 1
swansonk14/p_tqdm: 1
json-ld/json-ld.org: 1
cthoyt/multisplitby: 1
safisher/ornaseq: 1
rat-genome-database/RS-Rat-Strain-Ontology: 1
obophenotype/c-elegans-development-ontology: 1
edmundmiller/Mastodon-Bioinformatics: 1
gbv/bartoc.org: 1
rat-genome-database/cmo-clinical-measurement-ontology: 1
luis-gonzalez-m/collembola: 1
AnacletoLAB/grape: 1
reymond-group/drfp: 1
bio2bel/mirbase: 1
obophenotype/c-elegans-gross-anatomy-ontology: 1
hammerlab/vcf-annotate-polyphen: 1
cthoyt/resume: 1
cido-ontology/cido: 1
bio2bel/msig: 1
fair-software/howfairis: 1
omnisearch/ncro: 1
hemekg/hemekg: 1
callahantiff/OMOP2OBO: 1
trutzig89182/Mastodon-Sociologists: 1
bio2bel/entrez: 1
ComPath/ComPath: 1
rsc-ontologies/rxno: 1
pybel/pybel-jupyter: 1
cebel/pyhgnc: 1
mbr/tinydb-git: 1

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