obofoundry/obofoundry.github.io issues and pull requests

#2500 - Dashboard status indicator

Pull Request - State: open - Opened by erik-whiting 11 months ago - 1 comment

#2499 - Website updates: dashboard status indicator

Issue - State: closed - Opened by matentzn 11 months ago - 2 comments
Labels: website

#2498 - Change title of page from Membership to OBO Operations Committee Membership

Pull Request - State: closed - Opened by nlharris 11 months ago

#2497 - Hosting an official "OBO context" of all prefixes relevant to biological data integration

Issue - State: open - Opened by matentzn 11 months ago
Labels: policy, ontology metadata

#2496 - Retitle "Membership" page to Operations Committee Members

Issue - State: open - Opened by cmungall 11 months ago - 3 comments
Labels: website, governance

#2495 - DRAFT: Update SOP.md 'reactivating' section with timelines

Pull Request - State: closed - Opened by nataled 11 months ago - 2 comments

#2494 - Create 2023-12-18-3rd-issue-newsletter

Pull Request - State: closed - Opened by matentzn 11 months ago

#2493 - Add newsletter pics

Pull Request - State: closed - Opened by matentzn 11 months ago

#2492 - create 2023-12-18-3rd-issue-newsletter.md

Pull Request - State: closed - Opened by matentzn 11 months ago

#2491 - Remove old 'review' metadata field from metadata schema and entires

Pull Request - State: closed - Opened by deepakunni3 11 months ago - 1 comment

#2490 - Update OBO foundry metadata

Pull Request - State: closed - Opened by github-actions[bot] 11 months ago

#2490 - Update OBO foundry metadata

Pull Request - State: closed - Opened by github-actions[bot] 11 months ago

#2489 - Remove 'review' and 'review date' metadata field from metadata schema and entires

Issue - State: closed - Opened by deepakunni3 11 months ago
Labels: ontology metadata

#2488 - Update OBO foundry metadata

Pull Request - State: closed - Opened by github-actions[bot] 11 months ago

#2487 - Some changes the linter is suggesting

Pull Request - State: closed - Opened by matentzn 11 months ago - 1 comment

#2486 - Create occo.md

Pull Request - State: closed - Opened by zhengj2007 11 months ago - 6 comments
Labels: ontology metadata

#2485 - Clarify that the ontology reviewer should do the acceptance notifications

Pull Request - State: closed - Opened by matentzn 11 months ago

#2484 - Update OBO foundry metadata

Pull Request - State: closed - Opened by github-actions[bot] 12 months ago

#2483 - Improve JSON-LD context export

Pull Request - State: closed - Opened by cthoyt 12 months ago - 5 comments

#2482 - Update opl.md

Pull Request - State: closed - Opened by zhengj2007 12 months ago - 2 comments
Labels: ontology metadata

#2481 - Update iao.md

Pull Request - State: closed - Opened by zhengj2007 12 months ago - 1 comment
Labels: ontology metadata

#2480 - Update eupath.md

Pull Request - State: closed - Opened by zhengj2007 12 months ago
Labels: ontology metadata

#2479 - Update obcs.md

Pull Request - State: closed - Opened by zhengj2007 12 months ago - 2 comments
Labels: ontology metadata

#2478 - Update vo.md

Pull Request - State: closed - Opened by zhengj2007 12 months ago
Labels: ontology metadata

#2476 - Fix links to SOPs

Pull Request - State: closed - Opened by nlharris about 1 year ago

#2475 - Update new-ontology.yml instructions to better conform to principle 6

Pull Request - State: closed - Opened by nataled about 1 year ago

#2474 - Update OBO foundry metadata

Pull Request - State: closed - Opened by github-actions[bot] about 1 year ago

#2473 - Add Darren's status table; add "unresponsive" to statuses

Pull Request - State: closed - Opened by nlharris about 1 year ago - 3 comments

#2472 - Update status descriptions on http://obofoundry.org/docs/OntologyStatus.html

Issue - State: closed - Opened by nlharris about 1 year ago - 4 comments
Labels: website, principles, attn: OFOC call

#2471 - Update obib.md contact info

Pull Request - State: closed - Opened by jmwhorton about 1 year ago - 2 comments

#2470 - Update OBO foundry metadata

Pull Request - State: closed - Opened by github-actions[bot] about 1 year ago

#2469 - What's the status of MA and EMAPA?

Issue - State: open - Opened by cthoyt about 1 year ago - 12 comments
Labels: ontology metadata, specific ontology

#2468 - Update OBO foundry metadata

Pull Request - State: closed - Opened by github-actions[bot] about 1 year ago

#2467 - Mark OGSF as inactive

Pull Request - State: closed - Opened by cthoyt about 1 year ago
Labels: ontology metadata

#2466 - Mark MFMO as inactive

Pull Request - State: closed - Opened by cthoyt about 1 year ago
Labels: ontology metadata

#2465 - Mark FBbi as inactive

Pull Request - State: closed - Opened by cthoyt about 1 year ago
Labels: ontology metadata

#2464 - Update cl.md

Pull Request - State: closed - Opened by yongqunh about 1 year ago - 9 comments
Labels: ontology metadata

#2463 - Update OBO foundry metadata

Pull Request - State: closed - Opened by github-actions[bot] about 1 year ago

#2462 - Should OBO context JSON-LD file contain a prefix `obo`?

Issue - State: closed - Opened by cthoyt about 1 year ago - 2 comments
Labels: attn: Technical WG

#2461 - AfPO

Issue - State: closed - Opened by Melek-C about 1 year ago - 20 comments
Labels: new ontology, new ontology - accepted

#2460 - Update gaz.md

Pull Request - State: closed - Opened by lschriml about 1 year ago - 1 comment

#2459 - Document how we should organise community contributions in ontology reviews

Issue - State: open - Opened by matentzn about 1 year ago - 5 comments
Labels: policy, attn: Editorial WG, governance

#2458 - Update omrse.md

Pull Request - State: closed - Opened by hoganwr about 1 year ago - 9 comments
Labels: ontology metadata

#2457 - Make definitions required for all terms in new ontologies

Issue - State: closed - Opened by cthoyt about 1 year ago - 8 comments
Labels: attn: Editorial WG, principles

#2456 - FAQ question "How do I edit the metadata for my ontology?" is missing information about the domain and tags YAML properties

Issue - State: open - Opened by dillerm about 1 year ago - 1 comment
Labels: ontology metadata, documentation

#2455 - Update OBO foundry metadata

Pull Request - State: closed - Opened by github-actions[bot] about 1 year ago

#2455 - Update OBO foundry metadata

Pull Request - State: closed - Opened by github-actions[bot] about 1 year ago

#2453 - Draft: start of document for certain implementation details

Issue - State: open - Opened by nataled about 1 year ago - 6 comments
Labels: documentation, attn: Editorial WG, principles

#2450 - Campaign to standardize synonym types

Issue - State: open - Opened by cthoyt about 1 year ago - 3 comments
Labels: ontology metadata

#2432 - Update new-ontology.yml with labels & defs in English

Pull Request - State: closed - Opened by nataled about 1 year ago

#2429 - Update CL description

Pull Request - State: closed - Opened by matentzn about 1 year ago

#2428 - Request for new ontology [Occupation Ontology]

Issue - State: closed - Opened by zhengj2007 about 1 year ago - 33 comments
Labels: new ontology, new ontology - accepted

#2412 - Add `tox -e lint` to GHA

Pull Request - State: open - Opened by erik-whiting over 1 year ago - 13 comments
Labels: requires submitter clarification

#2410 - JSON-LD context does not expand as intended

Issue - State: closed - Opened by cmungall over 1 year ago - 3 comments
Labels: ontology metadata, attn: Technical WG

#2408 - Drop Social column from obofoundry.org home page tabular display

Issue - State: open - Opened by ddooley over 1 year ago - 8 comments
Labels: website, usability feature

#2406 - Request for new ontology [carolio]

Issue - State: closed - Opened by samie3000 over 1 year ago - 30 comments
Labels: new ontology, new ontology - submitter action needed

#2392 - Add test that new ontologies can be converted into OBO Graph JSON with ROBOT

Pull Request - State: closed - Opened by cthoyt over 1 year ago - 5 comments
Labels: attn: Technical WG

#2371 - Request for new ontology [Graphic Notation and Descriptor Ontology]

Issue - State: closed - Opened by melissaclarkson over 1 year ago - 11 comments
Labels: new ontology, new ontology - submitter action needed

#2369 - Add action to automatically update PRs with tox -e lint

Issue - State: open - Opened by matentzn over 1 year ago - 2 comments
Labels: pipeline, attn: Technical WG

#2361 - Formally registering the COC committee

Issue - State: open - Opened by matentzn over 1 year ago - 17 comments
Labels: governance

#2348 - New metadata tag: "defective" (ontology status)

Issue - State: open - Opened by matentzn over 1 year ago - 16 comments
Labels: policy, ontology metadata, newsletter

#2307 - jsonld context entry for SWO is incorrect, as SWO does not use OBO PURLs

Issue - State: open - Opened by cmungall over 1 year ago - 7 comments
Labels: ontology metadata, specific ontology

#2273 - SOP for "activating" a new OBO Priniciple

Issue - State: closed - Opened by matentzn almost 2 years ago - 7 comments
Labels: policy, website, attn: Editorial WG, principles

#2273 - SOP for "activating" a new OBO Priniciple

Issue - State: closed - Opened by matentzn almost 2 years ago - 7 comments
Labels: policy, website, attn: Editorial WG, principles

#2269 - Update gaz.md

Pull Request - State: open - Opened by lschriml almost 2 years ago - 19 comments
Labels: ontology metadata

#2263 - New FAQ on addressing dashboard issues

Issue - State: open - Opened by nataled almost 2 years ago - 6 comments
Labels: website, documentation, usability feature, attn: Technical WG

#2255 - Adding a flag "unresponsive" to OBO metadata

Issue - State: closed - Opened by matentzn almost 2 years ago - 21 comments
Labels: policy

#2241 - Document update metadata workflow and assign to metadata steward

Issue - State: closed - Opened by matentzn almost 2 years ago - 1 comment
Labels: ontology metadata, documentation

#2048 - Motion: Opening up OBO Operations Committee calls and meeting minutes

Issue - State: open - Opened by matentzn about 2 years ago - 20 comments
Labels: governance

#2033 - Having a "Search Ontobee" search box in the header is weird

Issue - State: open - Opened by nlharris about 2 years ago - 11 comments
Labels: website, usability feature

#1919 - Governance: admit ontologies based on consensus or majority voting?

Issue - State: open - Opened by matentzn over 2 years ago - 12 comments
Labels: policy, governance

#1912 - Request for new ontology MCRO

Issue - State: closed - Opened by ProfTuan over 2 years ago - 40 comments
Labels: new ontology, new ontology - accepted

#1883 - Request for new ontology : Vertebrate Breed Ontology (VBO)

Issue - State: closed - Opened by sabrinatoro over 2 years ago - 11 comments
Labels: new ontology, new ontology - accepted

#1867 - Drafting OBO Foundry SOPs and process documentation

Issue - State: closed - Opened by pbuttigieg over 2 years ago - 7 comments
Labels: policy, attn: Operations Committee, attn: Outreach WG, documentation, attn: Editorial WG, attn: Technical WG, governance

#1819 - New Ontology Request: NGBO

Issue - State: closed - Opened by Dalalghamdi over 2 years ago - 36 comments
Labels: new ontology, attn: OFOC call, new ontology - accepted

#1806 - New ontology Alzheimer's Disease Ontology

Issue - State: closed - Opened by BideZ over 2 years ago - 28 comments
Labels: new ontology, new ontology - accepted

#1708 - New Ontology Request: Provisional Cell Ontology

Issue - State: closed - Opened by shawntanzk almost 3 years ago - 23 comments
Labels: new ontology, new ontology - accepted

#1589 - Any ideas for an OBO volunteering scheme?

Issue - State: closed - Opened by matentzn about 3 years ago - 10 comments
Labels: governance, volunteering-scheme

#1577 - Provide a generic github action that create a merged OWL version of an edit file.

Issue - State: closed - Opened by matentzn about 3 years ago - 7 comments
Labels: pipeline

#1559 - FBcv and DPO both have same preferred prefix

Issue - State: closed - Opened by cthoyt over 3 years ago - 10 comments
Labels: specific ontology

#1487 - New Ontology Request: Ontology of Process Chemistry (PROCO)

Issue - State: closed - Opened by schaferw over 3 years ago - 33 comments
Labels: new ontology, attn: OFOC call, new ontology - accepted

#1443 - Define if and when it is OK to inject axioms into an external ontology

Issue - State: open - Opened by cmungall over 3 years ago - 58 comments
Labels: external resource, principles

#1386 - STATO has two contacts, but the schema only allows one

Issue - State: closed - Opened by jamesaoverton almost 4 years ago - 1 comment
Labels: specific ontology, principles

#1383 - NCIT and NCBITAXON ids

Issue - State: open - Opened by matentzn almost 4 years ago - 5 comments
Labels: policy, attn: Technical WG

#1382 - Implement YAML linting

Issue - State: closed - Opened by jamesaoverton almost 4 years ago - 1 comment
Labels: pipeline, attn: Technical WG

#1347 - Versioning term identifiers

Issue - State: closed - Opened by nlharris about 4 years ago - 8 comments
Labels: attn: Operations Committee, principles

#1326 - OLD: Portals

Pull Request - State: closed - Opened by matentzn about 4 years ago - 5 comments

#1090 - Use /meta/ PURLs rather than hardcoding github links

Issue - State: closed - Opened by cmungall almost 5 years ago - 2 comments
Labels: website, attn: Technical WG

#1040 - Update SWO metadata: clarify license, update description, mark inactive

Issue - State: open - Opened by cmungall about 5 years ago - 18 comments
Labels: ontology metadata, specific ontology

#1038 - Submit OBO prefixes to prefix.cc

Issue - State: open - Opened by cmungall about 5 years ago - 7 comments
Labels: external resource

#909 - ero has no tracker

Issue - State: closed - Opened by rvita over 5 years ago - 13 comments
Labels: specific ontology

#598 - update wikipedia page

Issue - State: open - Opened by jamesaoverton over 6 years ago - 5 comments
Labels: attn: Outreach WG, external resource

#400 - Features for classifying an ontology - replace reference vs. application

Issue - State: open - Opened by ramonawalls over 7 years ago - 19 comments
Labels: policy, website

#325 - Language requirement for new resources

Issue - State: open - Opened by mcourtot about 8 years ago - 3 comments
Labels: policy, documentation

#223 - legacy wiki pages should redirect

Issue - State: open - Opened by cmungall over 8 years ago - 3 comments
Labels: website, attn: Outreach WG

#162 - custom synonym/definition properties in YAML

Issue - State: open - Opened by simonjupp about 9 years ago - 9 comments
Labels: ontology metadata, pipeline

#46 - Add metrics

Issue - State: closed - Opened by mcourtot over 9 years ago - 8 comments
Labels: website, documentation, usability feature

#21 - Decide on action for FMA entry in OBO

Issue - State: open - Opened by cmungall over 9 years ago - 49 comments
Labels: ontology metadata, external resource

GitHub / obofoundry/obofoundry.github.io issues and pull requests