Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / linkml/linkml-runtime issues and pull requests

#326 - release candidate for 1.8 series

Pull Request - State: open - Opened by cmungall 3 days ago - 1 comment

#324 - null change to test workflow

Pull Request - State: open - Opened by cmungall 17 days ago - 1 comment

#321 - Adding a test for induced slot alias fields. Additional CURIE tests

Pull Request - State: closed - Opened by cmungall 3 months ago - 1 comment

#320 - Correct `linkml_files.URL_FOR` - add URL resolutiontests

Pull Request - State: closed - Opened by sneakers-the-rat 3 months ago - 3 comments

#319 - Add action to test with upstream linkml v2

Pull Request - State: open - Opened by sneakers-the-rat 3 months ago - 2 comments

#317 - [schemaview][bug] Pass `imports` as kwarg to `all_slots`

Pull Request - State: closed - Opened by sneakers-the-rat 3 months ago - 1 comment

#316 - Add action to test with upstream linkml

Pull Request - State: closed - Opened by sneakers-the-rat 3 months ago - 1 comment

#315 - fixed eval expression doctests and switched to pytest

Pull Request - State: closed - Opened by turbomam 3 months ago - 1 comment

#314 - pretty print models

Pull Request - State: open - Opened by sneakers-the-rat 3 months ago - 11 comments

#313 - Add inheritance ordering, unify element ordering

Pull Request - State: closed - Opened by sneakers-the-rat 3 months ago - 1 comment

#312 - Make tests fail, not print

Pull Request - State: open - Opened by sneakers-the-rat 3 months ago - 2 comments

#310 - Fix `linkml_files`

Pull Request - State: closed - Opened by sneakers-the-rat 3 months ago - 8 comments

#309 - Update Cache To Support > 128 Entries

Pull Request - State: open - Opened by timothy-trinidad-ps 4 months ago - 6 comments

#308 - Fix namespaces CURIE prefix & suffix extraction

Pull Request - State: closed - Opened by vincentkelleher 4 months ago - 2 comments

#307 - [perf] Use local schemas if available

Pull Request - State: open - Opened by sneakers-the-rat 4 months ago - 2 comments

#306 - [perf] Use yamllib if available

Pull Request - State: closed - Opened by sneakers-the-rat 4 months ago - 2 comments

#305 - Consolidate loaders

Pull Request - State: open - Opened by sneakers-the-rat 4 months ago - 7 comments

#304 - Optimize `get_classes_by_slot` round 2

Pull Request - State: open - Opened by sneakers-the-rat 4 months ago - 8 comments

#303 - Fixed CURIE validation to be conformant.

Pull Request - State: closed - Opened by cmungall 4 months ago - 1 comment

#302 - Fix `Schemaview.import_closure` order

Pull Request - State: closed - Opened by sneakers-the-rat 4 months ago - 1 comment

#300 - optimize `get_classes_by_slot()` in `schemaview.py`

Pull Request - State: closed - Opened by sujaypatil96 4 months ago - 4 comments

#299 - Improve date testing

Pull Request - State: closed - Opened by Silvanoc 4 months ago - 1 comment

#298 - chore: upgrading poetry

Pull Request - State: closed - Opened by Silvanoc 5 months ago - 1 comment

#297 - fix: replace deprecated method

Pull Request - State: closed - Opened by Silvanoc 5 months ago - 1 comment

#296 - Perf: Remove unnecessary `deepcopy` calls in `Schemaview.induced_slot`

Pull Request - State: closed - Opened by sneakers-the-rat 5 months ago - 1 comment

#295 - DO NOT MERGE YET linkml-model 1.7.0rc

Pull Request - State: closed - Opened by cmungall 5 months ago - 2 comments

#294 - remove slot name redundancy in get_slots_by_enum method

Pull Request - State: closed - Opened by sierra-moxon 6 months ago - 1 comment

#292 - Issue 1749 gh actions - add once a week dependency check

Pull Request - State: closed - Opened by sierra-moxon 7 months ago - 1 comment

#291 - add schemaview method to return permissible_value descendants and children

Pull Request - State: closed - Opened by sierra-moxon 7 months ago - 1 comment

#290 - remove noisy warning

Pull Request - State: closed - Opened by sierra-moxon 7 months ago - 1 comment

#289 - Fix warning in regex

Pull Request - State: closed - Opened by cthoyt 7 months ago - 1 comment

#287 - fix: add support for urns to curie namespaces

Pull Request - State: closed - Opened by Silvanoc 8 months ago - 1 comment

#286 - Add support for Python 3.12

Pull Request - State: closed - Opened by Silvanoc 8 months ago - 8 comments

#285 - Improve curie validation

Pull Request - State: open - Opened by Silvanoc 8 months ago - 3 comments

#284 - test: improve coverage of curie validation

Pull Request - State: closed - Opened by Silvanoc 8 months ago - 2 comments

#283 - failing test for curie with underscore and dot naming conventions

Pull Request - State: closed - Opened by sierra-moxon 8 months ago - 1 comment

#282 - bug fix in _construct_target_class()

Pull Request - State: closed - Opened by RichardBruskiewich 8 months ago - 1 comment

#281 - Optimize implementation of SchemaView `get_classes_by_slot()` method

Pull Request - State: open - Opened by sujaypatil96 8 months ago - 7 comments

#280 - fix: avoid uri shadowing

Pull Request - State: closed - Opened by Silvanoc 9 months ago - 10 comments

#279 - Issue 1627

Pull Request - State: closed - Opened by pkalita-lbl 10 months ago - 2 comments

#278 - Enable passing a converter to RDFLib dumper

Pull Request - State: closed - Opened by cthoyt 10 months ago - 5 comments

#277 - Update linkml-model to 1.6.0

Pull Request - State: closed - Opened by pkalita-lbl 10 months ago - 1 comment

#276 - updating linkml metamodel

Pull Request - State: closed - Opened by sierra-moxon 10 months ago

#275 - Fix accidential deletion of slot_usage

Pull Request - State: closed - Opened by lkuchenb 11 months ago - 1 comment

#274 - schema_as_dict removes content

Issue - State: closed - Opened by lkuchenb 11 months ago

#273 - remove check if identifier is python identifier, add tests

Pull Request - State: closed - Opened by sierra-moxon 11 months ago - 1 comment

#272 - Bump pydantic requirement

Pull Request - State: closed - Opened by caufieldjh 11 months ago - 4 comments

#271 - Ensure SchemaView uses importmap argument

Pull Request - State: closed - Opened by cmungall 12 months ago - 1 comment

#270 - Regenerate python dataclasses for validation models

Pull Request - State: closed - Opened by deepakunni3 about 1 year ago - 3 comments

#269 - Add `load_as_dict` method to Loader class

Pull Request - State: closed - Opened by pkalita-lbl about 1 year ago - 1 comment

#268 - Add new TSV loader/dumper classes

Pull Request - State: closed - Opened by pkalita-lbl about 1 year ago - 1 comment

#266 - update curies package, fixes #1444

Pull Request - State: closed - Opened by sierra-moxon about 1 year ago - 2 comments

#265 - do not treate default_prefix as CURIE prefix for URIs. Fixes #1041

Pull Request - State: open - Opened by cmungall about 1 year ago

#264 - Update README.md

Pull Request - State: closed - Opened by cmungall about 1 year ago

#263 - Alternative to https://github.com/linkml/linkml/pull/1379

Pull Request - State: closed - Opened by cmungall about 1 year ago - 1 comment

#261 - null test

Pull Request - State: closed - Opened by cmungall about 1 year ago - 1 comment

#260 - null test

Pull Request - State: closed - Opened by cmungall about 1 year ago - 1 comment

#259 - Normalizing lists of lists to N-dimensional arrays

Pull Request - State: closed - Opened by cmungall over 1 year ago

#258 - Fixes relative imports from a URL.

Pull Request - State: closed - Opened by cmungall over 1 year ago - 1 comment

#257 - fixes #1355

Pull Request - State: closed - Opened by WolfgangFahl over 1 year ago - 1 comment

#256 - pre-release of 1.5x series.

Pull Request - State: closed - Opened by cmungall over 1 year ago - 1 comment

#255 - linkml-model pre-release 1.5

Pull Request - State: closed - Opened by cmungall over 1 year ago - 2 comments

#254 - Fix get_classes_modifying_slot

Pull Request - State: closed - Opened by amc-corey-cox over 1 year ago - 7 comments

#253 - fixes bug where SchemaView could not be constructed directly from remote URL 1317

Pull Request - State: closed - Opened by cmungall over 1 year ago - 1 comment

#252 - avoid duplicate class names in `domain_of` slot

Pull Request - State: closed - Opened by sujaypatil96 over 1 year ago - 1 comment

#251 - CurieNamespace catalog that is not a singleton and that uses curies

Pull Request - State: open - Opened by kervel over 1 year ago - 3 comments

#250 - Update pypi-publish.yaml

Pull Request - State: closed - Opened by hrshdhgd over 1 year ago - 1 comment

#249 - SchemaView initialization from a PosixPath

Pull Request - State: closed - Opened by joeflack4 over 1 year ago - 3 comments
Labels: enhancement

#248 - Imports to metamodel resolved locally rather than over network, #1102.

Pull Request - State: closed - Opened by cmungall over 1 year ago - 3 comments

#247 - null change

Pull Request - State: closed - Opened by cmungall over 1 year ago

#246 - Fix for dangling object bug in ObjectIndex

Pull Request - State: closed - Opened by cmungall over 1 year ago

#245 - 1126 slot modifying classes

Pull Request - State: closed - Opened by amc-corey-cox over 1 year ago - 2 comments

#244 - Proposal for CurieNamespace with embedded catalog.

Pull Request - State: open - Opened by hsolbrig over 1 year ago - 10 comments

#243 - Add functions to look up a LinkML python class by URI or CURIE

Pull Request - State: closed - Opened by hsolbrig over 1 year ago - 1 comment

#242 - Add ability to expand all dicts to ExpandedDict on referencevalidator.

Pull Request - State: closed - Opened by cmungall over 1 year ago

#241 - allow setting of @base via prefix _base

Pull Request - State: closed - Opened by cmungall over 1 year ago

#239 - Added a ReferenceValidator that performs complete normalizations.

Pull Request - State: closed - Opened by cmungall over 1 year ago - 1 comment

#238 - Rdflib percent encoded tests

Pull Request - State: closed - Opened by cmungall over 1 year ago - 1 comment

#237 - Test for https://github.com/linkml/linkml/issues/1228

Pull Request - State: closed - Opened by cmungall over 1 year ago - 1 comment

#236 - Proposed update for https://github.com/linkml/linkml/issues/1188

Pull Request - State: closed - Opened by hsolbrig over 1 year ago - 3 comments

#235 - Add methods to replace functionality in biolink model toolkit with schemaview

Pull Request - State: closed - Opened by sierra-moxon over 1 year ago - 1 comment

#234 - Fix for https://github.com/linkml/linkml/issues/626.

Pull Request - State: closed - Opened by hsolbrig over 1 year ago

#233 - bake mergeimports functionality into SchemaView

Pull Request - State: closed - Opened by sujaypatil96 over 1 year ago - 1 comment

#232 - Update to latest metamodel

Pull Request - State: closed - Opened by cmungall over 1 year ago - 2 comments

#230 - include subsets in merge_schemas method.

Pull Request - State: closed - Opened by cmungall over 1 year ago - 1 comment

#229 - Fix for undeclared xsd when emitting literals

Pull Request - State: closed - Opened by cmungall over 1 year ago - 1 comment

#228 - Issue 1040

Pull Request - State: closed - Opened by hsolbrig over 1 year ago - 1 comment

#227 - Support Pydantic BaseModel in loaders and dumpers

Pull Request - State: closed - Opened by kevinschaper over 1 year ago - 8 comments
Labels: enhancement

#226 - Issue 65

Pull Request - State: closed - Opened by hsolbrig over 1 year ago