Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / zanglab/SICER2 issues and pull requests
#30 - How do I use call peak with samples with duplicates?
Issue -
State: open - Opened by anyang-kevin 5 months ago
#29 - bedtools bam2bed race condition
Issue -
State: open - Opened by skchronicles 5 months ago
- 1 comment
#28 - Keeping low number of PCR duplicates
Issue -
State: open - Opened by phoebe460 6 months ago
#27 - Error with --significant_reads
Issue -
State: closed - Opened by anyang-kevin 7 months ago
- 1 comment
#26 - SICER2 program run error
Issue -
State: closed - Opened by dkur0006 8 months ago
- 1 comment
#25 - Fixes zanglab/SICER2#24: Resolves ValueError caused by BED files with…
Pull Request -
State: closed - Opened by skchronicles 12 months ago
#24 - Error due to score numpy dtype
Issue -
State: closed - Opened by skchronicles 12 months ago
- 3 comments
#23 - Why are species and their chromosomes hardcoded ?
Issue -
State: open - Opened by vidal-adrien 12 months ago
- 3 comments
#22 - Release tag for v1.0.3
Issue -
State: open - Opened by apregier over 1 year ago
#21 - ValueError: math domain error
Issue -
State: open - Opened by MingLi-929 over 1 year ago
#20 - TypeError: can only concatenate str (not "numpy.int32") to str
Issue -
State: open - Opened by jaudall over 1 year ago
#19 - How to change the `treatment_file-W200-G600-islands-summary` file to the standard `bed` file format?
Issue -
State: open - Opened by danli349 over 1 year ago
- 1 comment
#18 - IndexError while "Determining the score threshold from random background..."
Issue -
State: open - Opened by arhickman about 2 years ago
- 3 comments
#17 - grep chrom name in the first BED column only
Pull Request -
State: open - Opened by darked89 about 2 years ago
#16 - suggestion to raise a warning for genome assembly version difference UCSC/ENSEMBL
Issue -
State: open - Opened by FatihSarigol over 2 years ago
#15 - Custom genome adding
Issue -
State: closed - Opened by El-Castor over 2 years ago
- 1 comment
#14 - Species info for custom genome.
Issue -
State: open - Opened by crowja almost 3 years ago
- 4 comments
#13 - Bug when names of input treatment and control files are the same
Issue -
State: closed - Opened by AlexandreLaverre almost 3 years ago
- 1 comment
#12 - how to identify differential peaks between cell lines
Issue -
State: open - Opened by pastaxingxin almost 3 years ago
#11 - Writing to /tmp on HPC Clusters
Issue -
State: closed - Opened by rpep over 3 years ago
- 2 comments
#10 - Not working when chromosome is not starting with "chr"
Issue -
State: open - Opened by PFRoux over 3 years ago
- 2 comments
#9 - Fix bug with printing messages.
Pull Request -
State: closed - Opened by jinyongyoo almost 4 years ago
#7 - New Species -s/--species
Issue -
State: closed - Opened by Reig-Valiente almost 4 years ago
- 2 comments
#6 - fixed bugs reported
Pull Request -
State: closed - Opened by jinyongyoo over 4 years ago
#5 - conda recipe
Issue -
State: closed - Opened by mjsteinbaugh over 4 years ago
- 2 comments
#4 - Write error when specifying output directory
Issue -
State: open - Opened by desireetillo almost 5 years ago
#3 - SICER2 can't run~
Issue -
State: closed - Opened by freedog8 almost 5 years ago
- 2 comments
#2 - paired-end?
Issue -
State: open - Opened by freedog8 almost 5 years ago
#1 - Running SICER2 with biological replicate
Issue -
State: closed - Opened by cell101 almost 5 years ago
- 5 comments