Ecosyste.ms: Issues

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GitHub / statisticalbiotechnology/diffacto issues and pull requests

#29 - Point cloud visualization script

Issue - State: closed - Opened by Starry-lei 4 months ago

#28 - Fix dtype spec for compatibility with latest numpy versions

Pull Request - State: closed - Opened by levitsky 11 months ago

#27 - Document -samples In More Detail

Issue - State: open - Opened by DarioS over 3 years ago

#26 - diffacto is now in bioconda and Galaxy

Issue - State: open - Opened by jj-umn over 3 years ago - 1 comment

#25 - Release 1.0.5

Issue - State: closed - Opened by jj-umn over 3 years ago - 1 comment

#24 - Between-sample Variation Appears Increased After Diffacto

Issue - State: open - Opened by DarioS over 3 years ago

#23 - Imputation Algorithm Not Documented

Issue - State: closed - Opened by DarioS over 3 years ago - 3 comments

#22 - Output File Linear Scale Feature Request

Issue - State: open - Opened by DarioS almost 4 years ago

#21 - Housekeeping Proteins and Incoherent Peptides

Issue - State: open - Opened by DarioS almost 4 years ago

#20 - No User Specification of Samples' Conditions

Issue - State: open - Opened by DarioS almost 4 years ago

#19 - Numerous Divide By Zero Warnings

Issue - State: open - Opened by DarioS almost 4 years ago - 4 comments

#18 - Broken Links in Installation Instructions

Issue - State: closed - Opened by DarioS almost 4 years ago - 3 comments

#17 - Installation Instructions Missing Something

Issue - State: closed - Opened by DarioS almost 4 years ago - 6 comments

#16 - Add export of protein loadings

Pull Request - State: closed - Opened by rohan-shah about 4 years ago

#15 - Output of peptide weights

Issue - State: open - Opened by percolator about 4 years ago - 2 comments
Labels: enhancement

#14 - Fix warnings

Pull Request - State: closed - Opened by rohan-shah almost 5 years ago - 1 comment

#13 - Change obsolete connected_component_subgraphs call to connected_components

Pull Request - State: closed - Opened by levitsky almost 5 years ago - 1 comment

#12 - Debug log0 gmm

Pull Request - State: closed - Opened by userbz over 5 years ago

#11 - Fix problems where a peptide has only one non-missing value

Pull Request - State: closed - Opened by rohan-shah over 5 years ago

#10 - Fixed Pool on Windows

Pull Request - State: closed - Opened by caetera over 5 years ago - 1 comment

#9 - Possible bug in zero_center_normalize with method = "GMM"?

Issue - State: closed - Opened by rohan-shah almost 6 years ago - 1 comment

#8 - Fix run-to-run reproducibility

Pull Request - State: closed - Opened by markmipt over 6 years ago - 1 comment

#7 - Enzyme cleavage rules for peptide-to-protein mapping

Issue - State: closed - Opened by markmipt over 6 years ago - 1 comment

#6 - basic multiprocessing support

Pull Request - State: closed - Opened by vnaum over 6 years ago - 1 comment

#5 - 2X speed up of the fast_farms function

Pull Request - State: closed - Opened by markmipt almost 7 years ago - 1 comment

#4 - Run-to-run reproducibility issue

Issue - State: closed - Opened by markmipt almost 7 years ago - 3 comments

#3 - feature suggestion: rescale intensities to preserve TIC

Issue - State: closed - Opened by timosachsenberg about 7 years ago - 2 comments

#2 - Fix missing variables when running script from /usr/bin/diffacto

Pull Request - State: closed - Opened by markmipt about 7 years ago

#1 - some unix friendliness - permissions, shebang

Pull Request - State: closed - Opened by vnaum almost 8 years ago