Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / spacegraphcats/spacegraphcats issues and pull requests
#416 - support multiple samples with a single spacegraphcats run?
Issue -
State: open - Opened by ctb over 3 years ago
#415 - [MRG] add thread/cores parameter to bcalm in the Snakefile
Pull Request -
State: closed - Opened by ctb over 3 years ago
- 3 comments
#414 - merge `test_dory_query_workflow` and `test_dory_query_workflow_checkpoint`
Issue -
State: open - Opened by ctb over 3 years ago
#413 - [MRG] test checkpointing code a little bit
Pull Request -
State: closed - Opened by ctb over 3 years ago
- 2 comments
#412 - [MRG] change self.dir to self.out_dir in catlas .py
Pull Request -
State: closed - Opened by taylorreiter over 3 years ago
- 4 comments
#411 - error when trying to use checkpoints from catlas
Issue -
State: closed - Opened by taylorreiter over 3 years ago
#410 - [MRG] add `defaults.conf`; update docs to specify YAML instead of JSON
Pull Request -
State: closed - Opened by ctb over 3 years ago
- 3 comments
#409 - Draft release notes for v2.0
Issue -
State: open - Opened by ctb over 3 years ago
- 1 comment
#404 - Density curves for catlases built from many query nbhds using different trimming and radius parameters
Issue -
State: open - Opened by taylorreiter over 3 years ago
- 7 comments
Labels: Results
#388 - Mapping between nodes in bcalm cbdg graph and spacegraphcats-custom graph stored in cdbg.txt
Issue -
State: closed - Opened by skafaie over 3 years ago
- 15 comments
#379 - [MRG] some trial scripts for protein search of unitigs
Pull Request -
State: closed - Opened by ctb almost 4 years ago
- 21 comments
Labels: Results
#372 - [EXP] Provide a new tool, graphgrep
Pull Request -
State: open - Opened by ctb almost 4 years ago
- 4 comments
#318 - [MAINT] maintenance branch for v1.x
Pull Request -
State: open - Opened by ctb about 4 years ago
#311 - a 2.0 release?
Issue -
State: open - Opened by ctb about 4 years ago
- 10 comments
Labels: v2.0
#305 - implement cDBG/domset output format for R import
Issue -
State: open - Opened by ctb about 4 years ago
- 4 comments
#303 - [MRG] add dominator abundance counting, per sample.
Pull Request -
State: closed - Opened by ctb about 4 years ago
- 46 comments
#297 - explore uses of colored cDBG
Issue -
State: open - Opened by ctb about 4 years ago
- 3 comments
#217 - adjust bcalm execution in conf/Snakefile to use threads
Issue -
State: closed - Opened by ctb almost 6 years ago
Labels: v2.0
#212 - [WIP] add script to compare nbhds
Pull Request -
State: closed - Opened by ctb almost 6 years ago
- 2 comments