GitHub / ctb issue stats
Total issues: 909
Total pull requests: 921
Merged pull request: 725
Average time to close issues: 7 months
Average time to close pull requests: 19 days
Average comments per issue: 1.33
Average comments per pull request: 1.38
Issues created
- sourmash-bio/sourmash: 392
- sourmash-bio/sourmash_plugin_branchwater: 109
- dib-lab/genome-grist: 40
- sourmash-bio/sourmash_plugin_betterplot: 28
- ribbity-org/ribbity: 25
- spacegraphcats/spacegraphcats: 22
- dinkum-bio/dinkum: 18
- taxburst/taxburst: 16
- ribbity-org/ribbity-docs: 14
- sourmash-bio/sourmash_plugin_directsketch: 14
- ctb/pony-build: 13
- oxli-bio/oxli: 12
- ribbity-org/ribbity-test-repo: 11
- dib-lab/pybbhash: 9
- ctb/2022-sourmash-sens-spec: 8
- ctb/magsearch: 8
- dib-lab/khmer: 8
- dib-lab/chill-filter: 8
- osfclient/osfclient: 8
- ctb/2025-ncbi-rest-api: 7
- sourmash-bio/sourmash_plugin_containment_search: 7
- ctb/2024-pangenome-hash-corr: 6
- dib-lab/screed: 6
- camillescott/dissertation: 6
- sourmash-bio/branchwater: 5
- gatb/bcalm: 4
- codemeleon/seqPanther: 4
- blahah/transrate: 4
- simonw/datasette: 4
- whole-tale/whole-tale: 4
- KatyBrown/plot_phylo: 3
- dib-lab/farm-notes: 3
- sourmash-bio/sourmash_plugin_template: 3
- andrewjpage/tiptoft: 3
- AllTheBacteria/AllTheBacteria: 3
- ctb/example-milestones: 3
- snakemake/snakemake: 3
- jdidion/xphyle: 3
- mummer4/mummer: 2
- sourmash-bio/sourmash_utils: 2
- camillescott/shmlast: 2
- openjournals/joss: 2
- dib-lab/kProcessor: 2
- ribbity-org/ribbity-sandbox: 2
- takluyver/nbopen: 2
- codemeta/codemeta: 2
- greenelab/meta-review: 2
- dib-lab/sourmash-slainte: 2
- DBRetina/DBRetina: 2
- Benjamin-Lee/CodonAdaptationIndex: 2
- sourmash-bio/branchwater-web: 2
- AstrobioMike/GToTree: 1
- niqdev/kotlin-fun: 1
- dib-lab/oxli: 1
- simonvh/fluff: 1
- donovan-h-parks/comparem: 1
- vanheeringen-lab/genomepy: 1
- datacarpentry/spreadsheet-ecology-lesson: 1
- dib-lab/sourmash_plugin_pangenomics: 1
- ctb/figleaf: 1
- marbl/Krona: 1
- Arcadia-Science/sourmashconsumr: 1
- tracykteal/moore-ddd-training-club: 1
- Mvila035/dna_parser: 1
- dib-lab/syrah: 1
- Roy-lab/scMTNI: 1
- jupyterhub/mybinder.org-user-guide: 1
- ngs-docs/2023-snakemake-book-draft: 1
- ctb/2020-stacked-dot-plots: 1
- ctb/2024-ebi-mgnify-rest: 1
- conda-forge/sourmash-minimal-feedstock: 1
- dib-lab/2024-december-hackathon: 1
- luizirber/phd: 1
- openjournals/jose: 1
- jupyter/jupyter: 1
- kvas-it/pytest-console-scripts: 1
- jupyter/enhancement-proposals: 1
- datacarpentry/shell-genomics: 1
- PyO3/maturin: 1
- conda-forge/ctng-compiler-activation-feedstock: 1
- dib-lab/buoy: 1
- koaning/calmcode-feedback: 1
- dib-lab/dib_rotation: 1
- shenwei356/csvtk: 1
- ngs-docs/monty-hall: 1
- jupyterhub/the-littlest-jupyterhub: 1
- ctb/2024-ggg298-example-repo-fascinating-stuff-in-here: 1
- ctb/2024-calc-full-gather: 1
- sourmash-bio/2025-sourmash-databases-doc-template: 1
- soedinglab/plass: 1
Pull requests created
- sourmash-bio/sourmash: 315
- sourmash-bio/sourmash_plugin_branchwater: 94
- dib-lab/genome-grist: 44
- sourmash-bio/sourmash_plugin_betterplot: 36
- dib-lab/chill-filter: 30
- spacegraphcats/spacegraphcats: 27
- dinkum-bio/dinkum: 25
- dib-lab/screed: 23
- conda-forge/sourmash_plugin_branchwater-feedstock: 18
- ribbity-org/ribbity: 18
- taxburst/taxburst: 14
- ctb/titus-blog: 12
- ctb/farm-docs: 11
- dib-lab/sourmash_plugin_pangenomics: 11
- oxli-bio/oxli: 11
- sourmash-bio/sourmash_plugin_containment_search: 9
- ngs-docs/2024-pig-paradigm-workshop: 9
- ctb/2024-pangenome-hash-corr: 8
- conda-forge/sourmash-minimal-feedstock: 8
- dib-lab/sourmash-slainte: 8
- dib-lab/oxli: 7
- ctb/magsearch: 6
- ctb/2020-stacked-dot-plots: 5
- luizirber/phd: 5
- ctb/get-some-ncbi-genomes: 5
- ngs-docs/2024-gern-dinkum: 4
- sourmash-bio/sourmash_plugin_directsketch: 4
- sourmash-bio/2025-sourmash-databases-doc-template: 4
- dib-lab/pybbhash: 4
- ctb/sourmash_plugin_abundhist: 4
- conda-forge/oxli-feedstock: 4
- conda-forge/sourmash_plugin_directsketch-feedstock: 4
- dib-lab/2022-database-covers: 4
- ctb/2025-ncbi-rest-api: 4
- sourmash-bio/sourmash_utils: 4
- ttimbers/skat_ngs-2015: 4
- sourmash-bio/sourmash_plugin_template: 3
- ctb/sourmash_plugin_commonhash: 3
- dib-lab/syrah: 3
- ctb/2020-rerun-hu-s1: 2
- snakemake/snakemake: 2
- MGNute/stamps_2024_assembly_tutorial: 2
- jdidion/xphyle: 2
- oliviaguest/pdist: 2
- dib-lab/sourmash-midgie-raker: 2
- sourmash-bio/branchwater: 2
- camillescott/2014-wabi: 2
- KatyBrown/plot_phylo: 2
- Arcadia-Science/sourmashconsumr: 2
- pyodide/pyodide: 2
- conda-forge/staged-recipes: 2
- ribbity-org/ribbity-test-repo: 2
- bacpop/pp-sketchlib: 2
- camillescott/shmlast: 2
- ctb/2024-debug-gather-difference: 2
- ctb/2023-equitable-efficient: 2
- simonw/datasette: 2
- ctb/2023-sinks-data-analysis: 2
- ribbity-org/ribbity-docs: 2
- nih-cfde/cfde-submit: 1
- camillescott/khmer: 1
- erikbern/git-of-theseus: 1
- jupyter/try-jupyter: 1
- mahdi-shafiei/LLMs-from-scratch: 1
- d-rug/d-rug.github.io: 1
- jupyterhub/the-littlest-jupyterhub: 1
- camillescott/2015-08-16-ucdavis-wise: 1
- dib-lab/dib_rotation: 1
- ctb/2016-phil-openscience: 1
- carolynvs/howtowhale: 1
- ctb/sourmash_plugin_load_from_fasta: 1
- dib-lab/khmer: 1
- DBRetina/DBRetina: 1
- Microbial-Ecology-Group/AMRplusplus: 1
- gina-v/GEMs: 1
- ccbaumler/2022-database-covers: 1
- danielskatz/sustaining-research-projects: 1
- lukasheinrich/yadage-ipython: 1
- frizzle-chan/fax.frizzle.lol: 1
- makersacademy/acebook-mern-vite: 1
- petehaitch/genomictuples-old: 1
- bioconda/bioconda-recipes: 1
- grunwaldlab/metacoder_documentation: 1
- Benjamin-Lee/CodonAdaptationIndex: 1
- ctb/www-ged.msu.edu: 1
- ccbaumler/2025-sebastian-paper: 1
- luizirber/2014-hll-counter: 1
- camillescott/pydoit-intermediate: 1
- jtleek/rpackages: 1
- donovan-h-parks/biolib: 1
- datacarpentry/documents: 1
- ctb/2022-datalab-affiliates-example1: 1
- ctb/cse491-serverz: 1
- ctb/sourmash_plugin_template_test1: 1
- python/pycon-code-of-conduct: 1
- osfclient/osfclient: 1
- ctb/cuttlefish: 1
- ga4gh/ga4gh-drs-client: 1
- ctb/2022-sourmash-rust-countergather: 1
- bnelsj/sourmash: 1
- luizirber/2021-02-11-sourmash-binary-format: 1
- donovan-h-parks/comparem: 1
- systemsbiologist/pscan: 1
- dib-lab/2022-branchwater-benchmarking: 1
- rgaiacs/swc-git-intermediate: 1
- noamross/jekyll-site: 1
- informatics-isi-edu/deriva-py: 1
- daler/hubward: 1
- camillescott/dissertation: 1
- ctb/2020-cfde-webfoo: 1
- ctb/2016-travis-testy-2: 1
- ucdavisdatalab/workshop_r_basics: 1
- ctb/2014-streaming: 1
- LvffY/tox-setuptools-version: 1
- BD2KGenomics/cgcloud: 1
- gatb/bcalm: 1
- ctb/2025-sourmash-compare-taxonomies: 1
- ctb/2016-travis-testy: 1
- pyodide/pyodide-recipes: 1
- dib-lab/2024-december-hackathon: 1
- ctb/sourmash_plugin_branchwater-feedstock: 1
- pyOpenSci/software-peer-review: 1
- bioconda/bioconda.github.io: 1
- camillescott/goetia: 1
- ctb/utility-notebooks: 1
- dib-lab/2020-paper-sourmash-gather: 1
- ctb/2024-ebi-mgnify-rest: 1
- ctb/2022-sourmash-filter-min-samples: 1
Maintainer
- sourmash-bio/sourmash_plugin_branchwater: 203
- dib-lab/genome-grist: 84
- spacegraphcats/spacegraphcats: 49
- ribbity-org/ribbity: 43
- dinkum-bio/dinkum: 43
- dib-lab/chill-filter: 38
- dib-lab/screed: 29
- ribbity-org/ribbity-docs: 16
- ctb/2024-pangenome-hash-corr: 14
- ctb/magsearch: 14
- dib-lab/pybbhash: 13
- ribbity-org/ribbity-test-repo: 13
- ctb/pony-build: 13
- dib-lab/sourmash_plugin_pangenomics: 12
- ctb/titus-blog: 12
Active Maintainer
- sourmash-bio/sourmash_plugin_branchwater: 66
- dib-lab/chill-filter: 38
- dib-lab/genome-grist: 21
- ctb/2025-ncbi-rest-api: 11
- dinkum-bio/dinkum: 10
- ctb/get-some-ncbi-genomes: 4
- dib-lab/sourmash-midgie-raker: 2
- dib-lab/2024-december-hackathon: 2
- frizzle-chan/fax.frizzle.lol: 1
- makersacademy/acebook-mern-vite: 1
- dib-lab/sourmash_plugin_pangenomics: 1
- ctb/2025-sourmash-compare-taxonomies: 1
- ctb/sourmash_plugin_abundhist: 1
- dib-lab/2020-paper-sourmash-gather: 1
- mahdi-shafiei/LLMs-from-scratch: 1
Issue Author Associations
- Contributor (512, 56.33%)
- Collaborator (185, 20.35%)
- Member (116, 12.76%)
- Owner (50, 5.50%)
- None (46, 5.06%)
Pull Request Author Associations
- Contributor (478, 51.90%)
- Member (186, 20.20%)
- Collaborator (150, 16.29%)
- Owner (83, 9.01%)
- None (24, 2.61%)
Top Issue Labels
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- rust (12)
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- good first issue (7)
- code (7)
- bug (6)
- plugin (5)
- intermediate (5)
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- client (5)
- tutorial (4)
Top Pull Request Labels
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