Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / obi-ontology/obi issues and pull requests

#1786 - build status badge not rendering

Issue - State: open - Opened by turbomam 8 months ago

#1784 - NTR for CRISPR screen assays

Issue - State: open - Opened by jenjou 9 months ago

#1783 - Problematic term: 'perturbation device'

Issue - State: open - Opened by mgiglio99 9 months ago
Labels: domain:material - devices_instruments_reagents

#1782 - Release Candidate 2024-05-03

Pull Request - State: closed - Opened by sebastianduesing 10 months ago - 1 comment

#1781 - Add terms to core.txt that were missing after IAO import module update

Pull Request - State: closed - Opened by sebastianduesing 10 months ago - 3 comments

#1780 - NTR: long-read RNA sequencing assay

Issue - State: open - Opened by jenjou 10 months ago - 6 comments

#1779 - Add RO import for COB integration

Pull Request - State: open - Opened by sebastianduesing 10 months ago - 4 comments

#1778 - Add editor's note about relation b/t OBI & CHEBI: solvent/solvent role

Pull Request - State: closed - Opened by sebastianduesing 10 months ago - 3 comments

#1777 - Release Candidate 2024-04-05

Pull Request - State: closed - Opened by sebastianduesing 10 months ago - 2 comments

#1776 - Add info that pipe is internal separator to biobank-specimens.tsv

Pull Request - State: closed - Opened by cmungall 11 months ago - 1 comment

#1774 - proposed DI water structure

Pull Request - State: closed - Opened by turbomam 11 months ago - 1 comment

#1773 - local commit to cleanup but not forget

Pull Request - State: closed - Opened by turbomam 11 months ago - 2 comments

#1772 - NTR 'deionized water' and 'water deionization process'

Issue - State: closed - Opened by turbomam 11 months ago - 1 comment

#1771 - Harmonize OBI:solvent role and CHEBI:solvent

Issue - State: open - Opened by StroemPhi 11 months ago - 9 comments

#1769 - Remove genIDs

Pull Request - State: closed - Opened by sebastianduesing 11 months ago

#1768 - Add a concept to represent ring trials

Issue - State: open - Opened by cmungall 12 months ago - 4 comments

#1766 - Add gene silencing assay

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago - 1 comment

#1765 - Add minimum resolved unit of measurement

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago - 1 comment

#1764 - Create IAO import module

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago - 10 comments

#1763 - Add terms for fasting/overnight fasting

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago - 1 comment

#1762 - Add albumin-free serum

Pull Request - State: open - Opened by sebastianduesing about 1 year ago

#1762 - Add albumin-free serum

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago - 4 comments

#1761 - "atom" placement in OBI and COB

Issue - State: open - Opened by DanBerrios about 1 year ago - 2 comments

#1761 - "atom" placement in OBI and COB

Issue - State: closed - Opened by DanBerrios about 1 year ago - 3 comments

#1760 - Integrating MRI acquisition assays into OBI

Issue - State: open - Opened by adbartni about 1 year ago - 4 comments

#1759 - Release Candidate 2024-01-09

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago - 1 comment

#1759 - Release Candidate 2024-01-09

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago - 1 comment

#1758 - More portable date format

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago

#1758 - More portable date format

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago

#1757 - Release Candidate

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago - 1 comment

#1757 - Release Candidate

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago - 1 comment

#1756 - Adds documentation on how to import from a new ontology

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago

#1756 - Adds documentation on how to import from a new ontology

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago

#1755 - git command-line overview link in README.md is broken

Issue - State: open - Opened by turbomam about 1 year ago

#1755 - git command-line overview link in README.md is broken

Issue - State: open - Opened by turbomam about 1 year ago

#1754 - Antibody purification processes

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago - 1 comment

#1754 - Antibody purification processes

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago - 1 comment

#1753 - Adds MFI score term for HCC

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago

#1753 - Adds MFI score term for HCC

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago

#1752 - Obsoleting OBI's CD8 receptor class in favor of PR term

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago - 1 comment

#1752 - Obsoleting OBI's CD8 receptor class in favor of PR term

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago - 1 comment

#1751 - Purification processes

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago - 1 comment

#1751 - Purification processes

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago - 1 comment

#1750 - Update due to change in OWL API quotation mark handling

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago

#1750 - Update due to change in OWL API quotation mark handling

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago

#1749 - Update illumina methylationEPIC v1.0 & v2.0 beadchips

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago

#1749 - Update illumina methylationEPIC v1.0 & v2.0 beadchips

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago

#1748 - Removing "check on definition" comments

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago

#1748 - Removing "check on definition" comments

Pull Request - State: closed - Opened by sebastianduesing about 1 year ago

#1747 - Add mass spectrometry analysis terms

Pull Request - State: closed - Opened by sebastianduesing over 1 year ago - 1 comment

#1747 - Add mass spectrometry analysis terms

Pull Request - State: closed - Opened by sebastianduesing over 1 year ago - 1 comment

#1746 - creatine assay and creatine measurement

Issue - State: open - Opened by masciam over 1 year ago - 2 comments

#1746 - creatine assay and creatine measurement

Issue - State: open - Opened by masciam over 1 year ago - 2 comments
Labels: dev:question for OBI

#1745 - Added MRI acquisition types and segmentation classes

Pull Request - State: closed - Opened by adbartni over 1 year ago - 2 comments

#1745 - Added MRI acquisition types and segmentation classes

Pull Request - State: closed - Opened by adbartni over 1 year ago - 2 comments

#1744 - Map to Emerald Cloud Laboratories (ECL) ontology

Issue - State: closed - Opened by cmungall over 1 year ago - 1 comment

#1744 - Map to Emerald Cloud Laboratories (ECL) ontology

Issue - State: closed - Opened by cmungall over 1 year ago - 1 comment

#1743 - NTR: water filtration

Issue - State: open - Opened by Anoosha-Sehar over 1 year ago

#1743 - NTR: water filtration

Issue - State: open - Opened by Anoosha-Sehar over 1 year ago - 3 comments
Labels: dev:new term

#1742 - Fix typo in OBI:1110043

Pull Request - State: closed - Opened by sebastianduesing over 1 year ago

#1742 - Fix typo in OBI:1110043

Pull Request - State: closed - Opened by sebastianduesing over 1 year ago

#1741 - Add two IEDB assays

Pull Request - State: closed - Opened by sebastianduesing over 1 year ago

#1741 - Add two IEDB assays

Pull Request - State: closed - Opened by sebastianduesing over 1 year ago

#1740 - Minor fixes

Pull Request - State: closed - Opened by jamesaoverton over 1 year ago

#1740 - Minor fixes

Pull Request - State: closed - Opened by jamesaoverton over 1 year ago

#1739 - Clean up OBI editor notes and curator notes

Issue - State: open - Opened by jamesaoverton over 1 year ago - 1 comment
Labels: admin:cleanup

#1738 - Add reactant role and precursor role

Pull Request - State: closed - Opened by sebastianduesing over 1 year ago

#1738 - Add reactant role and precursor role

Pull Request - State: closed - Opened by sebastianduesing over 1 year ago

#1737 - Disease related objectives

Pull Request - State: closed - Opened by sebastianduesing over 1 year ago

#1737 - Disease related objectives

Pull Request - State: closed - Opened by sebastianduesing over 1 year ago

#1736 - Change label of 'specimen identifier'

Issue - State: open - Opened by mbrochhausen over 1 year ago - 2 comments
Labels: dev:input wanted

#1736 - Change label of 'specimen identifier'

Issue - State: open - Opened by mbrochhausen over 1 year ago - 3 comments
Labels: dev:input wanted

#1735 - Do not assert that minQualifiedCardinality is an AP

Pull Request - State: closed - Opened by jamesaoverton over 1 year ago

#1735 - Do not assert that minQualifiedCardinality is an AP

Pull Request - State: closed - Opened by jamesaoverton over 1 year ago

#1729 - Use of "information content entity" vs "data item" as parent

Issue - State: open - Opened by khelm over 1 year ago - 1 comment
Labels: dev:question for OBI

#1728 - Mis-spelling in term with label 'cultured adherent cell populaiton'

Issue - State: closed - Opened by khelm over 1 year ago - 1 comment

#1728 - Mis-spelling in term with label 'cultured adherent cell populaiton'

Issue - State: closed - Opened by khelm over 1 year ago - 1 comment

#1727 - Addition of chemical roles and precursor role

Issue - State: closed - Opened by cameronmore over 1 year ago - 2 comments

#1727 - Addition of chemical roles and precursor role

Issue - State: closed - Opened by cameronmore over 1 year ago - 2 comments

#1723 - IDO and OBI 'pathogen role'

Issue - State: open - Opened by zhengj2007 over 1 year ago - 12 comments

#1723 - IDO and OBI 'pathogen role'

Issue - State: open - Opened by zhengj2007 over 1 year ago - 2 comments

#1706 - Template for 'administration of substance in vivo' terms

Pull Request - State: closed - Opened by sebastianduesing over 1 year ago - 2 comments

#1706 - Template for 'administration of substance in vivo' terms

Pull Request - State: closed - Opened by sebastianduesing over 1 year ago - 2 comments

#1703 - NTR: routes of administration

Issue - State: closed - Opened by sebastianduesing over 1 year ago - 2 comments
Labels: dev:new term

#1703 - NTR: routes of administration

Issue - State: closed - Opened by sebastianduesing over 1 year ago - 2 comments
Labels: dev:new term

#1690 - embryonic or in ovo study design

Issue - State: closed - Opened by masciam almost 2 years ago - 2 comments
Labels: dev:question for OBI

#1690 - embryonic or in ovo study design

Issue - State: closed - Opened by masciam almost 2 years ago - 2 comments
Labels: dev:question for OBI

#1684 - NTR: spectrometry analysis terms

Issue - State: closed - Opened by hectorguzor almost 2 years ago
Labels: dev:new term, domain:data and information, domain:process - planned_process

#1684 - NTR: spectrometry analysis terms

Issue - State: closed - Opened by hectorguzor almost 2 years ago
Labels: dev:new term, domain:data and information, domain:process - planned_process

#1671 - Try ripping out non-OBI axioms and merging in COB

Issue - State: open - Opened by jamesaoverton almost 2 years ago - 2 comments
Labels: admin:high priority, coord:COB migration

#1668 - NTR: breath specimen, breath assay

Issue - State: closed - Opened by johnwjudkins almost 2 years ago - 4 comments
Labels: dev:new term, domain:process - assay, domain:material - specimen

#1668 - NTR: breath specimen, breath assay

Issue - State: closed - Opened by johnwjudkins almost 2 years ago - 4 comments
Labels: dev:new term, domain:process - assay, domain:material - specimen

#1665 - Possible to improve OBI_0002131?

Issue - State: closed - Opened by allaway almost 2 years ago - 2 comments
Labels: dev:term revision, dev:question for OBI