Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / linkml/schema-automator issues and pull requests
#100 - Trouble installing schema-automator into semantic-synbio/synbio-schema
Issue -
State: closed - Opened by turbomam almost 2 years ago
- 3 comments
#99 - Help with `AttributeError: 'NoneType' object has no attribute 'classes'`
Issue -
State: open - Opened by matentzn about 2 years ago
- 6 comments
#98 - OMOP test case: generalize-tsv
Pull Request -
State: closed - Opened by matentzn about 2 years ago
- 4 comments
#97 - update oaklib to help with main branch test failures
Issue -
State: closed - Opened by sierra-moxon about 2 years ago
Labels: bug
#96 - update dependencies fixes #95 fixes #97
Pull Request -
State: closed - Opened by sierra-moxon about 2 years ago
#95 - schema-automator has dependency conflicts when trying to install in a linkml-project-cookiecutter repository
Issue -
State: closed - Opened by sierra-moxon about 2 years ago
Labels: good first issue
#94 - Using inflect library to depluralize class names when generalizing.
Pull Request -
State: closed - Opened by cmungall about 2 years ago
#93 - can any of the importers or generalizers infer that 0/1/True/False etc. are of type boolean?
Issue -
State: open - Opened by turbomam about 2 years ago
Labels: bug
#92 - Improved docs for annotator
Pull Request -
State: closed - Opened by cmungall about 2 years ago
#91 - poetry cli target for import-sql
Pull Request -
State: closed - Opened by sujaypatil96 about 2 years ago
- 1 comment
Labels: enhancement
#90 - Added toml generalizer
Pull Request -
State: closed - Opened by cmungall about 2 years ago
#89 - Use json2python-models as a generalizer
Issue -
State: open - Opened by cmungall about 2 years ago
#88 - Write a pydantic-importer (pydantic class -> LinkML YAML)
Issue -
State: open - Opened by cmungall about 2 years ago
- 1 comment
Labels: good first issue
#87 - Write an XML Schema importer
Issue -
State: open - Opened by cmungall about 2 years ago
- 1 comment
Labels: generator-misc
#86 - Additional tests and documentation
Pull Request -
State: closed - Opened by cmungall about 2 years ago
#85 - `convert_dicts` throws a TypeError with nested lists
Issue -
State: open - Opened by ialarmedalien about 2 years ago
Labels: bug
#84 - Added generalization using panderas
Pull Request -
State: closed - Opened by cmungall about 2 years ago
#83 - Add ability to import a schema from an HTML table
Issue -
State: open - Opened by cmungall about 2 years ago
Labels: convert
#82 - Re committing sql_importer.
Pull Request -
State: closed - Opened by cmungall about 2 years ago
#81 - doc-fixes-bullets
Pull Request -
State: closed - Opened by cmungall about 2 years ago
#80 - Enhancing sphinx docs
Pull Request -
State: closed - Opened by cmungall about 2 years ago
#79 - Added frictionless importer
Pull Request -
State: closed - Opened by cmungall about 2 years ago
#78 - First pass at SQL Importer. See #67
Pull Request -
State: closed - Opened by cmungall about 2 years ago
#77 - Schema enricher and Docker config
Pull Request -
State: closed - Opened by cmungall about 2 years ago
#76 - Dockerize this package
Issue -
State: closed - Opened by cmungall about 2 years ago
#75 - refactoring
Pull Request -
State: closed - Opened by cmungall over 2 years ago
#74 - TsvDataGeneralizer should have option to make a container class
Issue -
State: open - Opened by cmungall over 2 years ago
#73 - pypi
Pull Request -
State: closed - Opened by cmungall over 2 years ago
#72 - update pypi release action
Pull Request -
State: closed - Opened by cmungall over 2 years ago
#71 - removing unused files
Pull Request -
State: closed - Opened by cmungall over 2 years ago
#70 - Refactored package layout and command line interface
Pull Request -
State: closed - Opened by cmungall over 2 years ago
#69 - Small fixes to automator
Pull Request -
State: closed - Opened by matentzn over 2 years ago
#68 - set version to 0.0.0 and added authors
Pull Request -
State: closed - Opened by turbomam over 2 years ago
#67 - Add ability to bootstrap a linkml schema from a SQL DDL
Issue -
State: closed - Opened by cmungall over 2 years ago
- 1 comment
#66 - Make README concise and change documentation theme.
Pull Request -
State: closed - Opened by hrshdhgd over 2 years ago
#65 - Sphinx docs
Pull Request -
State: closed - Opened by hrshdhgd over 2 years ago
#64 - create a site using sphinx
Issue -
State: closed - Opened by cmungall over 2 years ago
#63 - add commands for jsonschema translator to pyproject.toml
Pull Request -
State: closed - Opened by sierra-moxon over 2 years ago
#62 - add working token for pypi
Pull Request -
State: closed - Opened by sierra-moxon over 2 years ago
#61 - refactor code to use new name in prep for release on pypi
Pull Request -
State: closed - Opened by sierra-moxon over 2 years ago
#60 - owlimports schemaorg
Pull Request -
State: closed - Opened by cmungall over 2 years ago
#59 - Address issues from PR #47
Issue -
State: open - Opened by cmungall over 2 years ago
- 1 comment
#58 - uses schema.org rangeincludes/domain includes
Pull Request -
State: closed - Opened by cmungall over 2 years ago
#57 - docs(readme): update installation section
Pull Request -
State: closed - Opened by noelmcloughlin over 2 years ago
- 1 comment
#56 - General repo maintenance
Issue -
State: open - Opened by sujaypatil96 over 2 years ago
- 5 comments
Labels: enhancement, backlog, low priority
#55 - rename this repo
Issue -
State: closed - Opened by cmungall over 2 years ago
- 1 comment
#54 - EBI OLS started returning XMLHttpRequest instead of JSON?!
Issue -
State: closed - Opened by turbomam over 2 years ago
- 2 comments
#53 - Loss of non-ASCII characters in enum annotation
Issue -
State: open - Opened by turbomam over 2 years ago
- 1 comment
#52 - provide cleanup from enum annotation annotations
Issue -
State: closed - Opened by turbomam over 2 years ago
- 1 comment
#51 - enum_annotator: title is not a recommended slot on permissible values
Issue -
State: closed - Opened by turbomam over 2 years ago
- 1 comment
#50 - description and xrefs in enum_annotator's --all_mappings_fn are embedded as dataframes
Issue -
State: closed - Opened by turbomam over 2 years ago
- 1 comment
#49 - how to collapse multiple PVs mapped to the same meaning?
Issue -
State: closed - Opened by turbomam over 2 years ago
- 1 comment
#48 - add ubiquity count to enums_to_curateable
Issue -
State: closed - Opened by turbomam over 2 years ago
- 2 comments
#47 - Mark cumulative
Pull Request -
State: closed - Opened by turbomam over 2 years ago
- 2 comments
#46 - Mark combined testing
Pull Request -
State: closed - Opened by turbomam over 2 years ago
- 1 comment
#45 - Update check-pull-request.yaml
Pull Request -
State: closed - Opened by turbomam over 2 years ago
- 1 comment
#44 - moved one failing test to pre_poetry #43
Pull Request -
State: closed - Opened by turbomam over 2 years ago
#43 - resinstate tests
Issue -
State: closed - Opened by turbomam over 2 years ago
- 6 comments
#42 - Choose who owns linkml-model-enrichment in PyPI and what metadata should be used
Issue -
State: closed - Opened by turbomam over 2 years ago
- 1 comment
#41 - test DF sizes #35
Pull Request -
State: closed - Opened by turbomam over 2 years ago
#40 - don't pin requirment versions so hard
Issue -
State: closed - Opened by turbomam over 2 years ago
- 2 comments
Labels: enhancement
#39 - TSV report of the enums and permissible values #38
Pull Request -
State: closed - Opened by turbomam over 2 years ago
- 1 comment
#38 - simple TSV dump of enum and pv names
Issue -
State: closed - Opened by turbomam over 2 years ago
Labels: enhancement
#37 - files for GH action #33 #23
Pull Request -
State: closed - Opened by turbomam over 2 years ago
#36 - Add documentation for post-annotation enum curation scripts
Issue -
State: closed - Opened by turbomam over 2 years ago
- 1 comment
Labels: documentation, enhancement
#35 - enum_annotator.py chokes on some of the enums from the NMDC DH model
Issue -
State: closed - Opened by turbomam over 2 years ago
- 1 comment
Labels: bug
#34 - Update README
Issue -
State: closed - Opened by turbomam over 2 years ago
- 1 comment
Labels: documentation, enhancement
#33 - shift GH actions to poetry instead of pip?
Issue -
State: closed - Opened by turbomam over 2 years ago
- 5 comments
Labels: enhancement
#32 - added trim_parentheticals to enum_annotator #31
Pull Request -
State: closed - Opened by turbomam over 2 years ago
- 1 comment
#31 - truncate trailing parenthetical portions of enum queries
Issue -
State: closed - Opened by turbomam over 2 years ago
Labels: enhancement
#30 - match_id annotation for #19
Pull Request -
State: closed - Opened by turbomam over 2 years ago
- 1 comment
#29 - Issue 19
Pull Request -
State: closed - Opened by turbomam over 2 years ago
- 2 comments
#28 - added jsonld context annotator
Pull Request -
State: closed - Opened by cmungall over 2 years ago
- 2 comments
#27 - possibly redundant with #22 from upstream repo?
Pull Request -
State: closed - Opened by turbomam over 2 years ago
#26 - tidying - may be redundant with latest version
Pull Request -
State: closed - Opened by cmungall almost 3 years ago
#25 - schema annotator
Pull Request -
State: closed - Opened by cmungall almost 3 years ago
#24 - Issue #22 enum anno evo
Pull Request -
State: closed - Opened by turbomam almost 3 years ago
- 2 comments
#23 - Try switching to poetry in this repo
Issue -
State: closed - Opened by turbomam almost 3 years ago
- 6 comments
Labels: enhancement, devops
#22 - PR for evolved enum annotator and manual review components
Issue -
State: closed - Opened by turbomam almost 3 years ago
- 2 comments
#21 - review annotator
Issue -
State: closed - Opened by cmungall almost 3 years ago
- 2 comments
#20 - consider a more conventional approach to http requests in annotate-enums
Issue -
State: closed - Opened by cmungall almost 3 years ago
- 1 comment
#19 - Annotate meanings
Issue -
State: closed - Opened by turbomam almost 3 years ago
- 1 comment
Labels: enhancement
#18 - annotator
Pull Request -
State: closed - Opened by cmungall almost 3 years ago
#17 - add a method to generate edge slots from a TSV
Pull Request -
State: closed - Opened by sierra-moxon almost 3 years ago
#16 - biopax
Pull Request -
State: closed - Opened by cmungall almost 3 years ago
#15 - document "requirement" for "pip install -e ."
Issue -
State: closed - Opened by turbomam almost 3 years ago
- 3 comments
Labels: bug
#14 - rdflib and other pip incompatibilities
Issue -
State: closed - Opened by turbomam almost 3 years ago
- 8 comments
Labels: bug
#13 - json instance import
Pull Request -
State: closed - Opened by cmungall about 3 years ago
- 1 comment
#12 - General debugging in advance of ICBO 2021
Issue -
State: closed - Opened by turbomam about 3 years ago
- 1 comment
Labels: bug
#11 - jsonschema-and-dosdps
Pull Request -
State: closed - Opened by cmungall about 3 years ago
#10 - Infer from owl
Pull Request -
State: closed - Opened by cmungall about 3 years ago
#9 - Refactor all_enums_to_ols to avoid globals
Issue -
State: closed - Opened by cmungall about 3 years ago
- 3 comments
#8 - Adding inference from OWL schemas and RDF instance graphs
Pull Request -
State: closed - Opened by cmungall about 3 years ago
#7 - infer_model.py intermittently has problems parsing dates in non date cols?
Issue -
State: closed - Opened by turbomam about 3 years ago
- 1 comment
Labels: bug
#6 - prototype the OLS term search approach with the FAO soil classes in the MIxS (5?) model
Issue -
State: closed - Opened by turbomam over 3 years ago
- 2 comments
#5 - todo (before merging webmap code into main ?)
Issue -
State: open - Opened by turbomam over 3 years ago
- 3 comments
#4 - temporarily disabled test action
Issue -
State: closed - Opened by turbomam over 3 years ago
- 1 comment
#3 - can't get infer_model.py started
Issue -
State: closed - Opened by turbomam over 3 years ago
- 1 comment
Labels: bug
#2 - web based term mapping
Pull Request -
State: closed - Opened by turbomam over 3 years ago
- 3 comments
#1 - Add bioportal annotator code
Issue -
State: closed - Opened by cmungall over 3 years ago
- 1 comment