Ecosyste.ms: Issues

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GitHub / lieberinstitute/zandihyde_bipolar_rnaseq issues and pull requests

#15 - Update citation info

Issue - State: closed - Opened by lcolladotor almost 3 years ago - 2 comments

#15 - Update citation info

Issue - State: closed - Opened by lcolladotor almost 3 years ago - 2 comments

#14 - Test for DE in marker genes used for deconvolution

Issue - State: closed - Opened by lahuuki over 3 years ago - 2 comments

#14 - Test for DE in marker genes used for deconvolution

Issue - State: closed - Opened by lahuuki over 3 years ago - 2 comments

#13 - Variability in gene expression between sACC and AMYG

Issue - State: closed - Opened by lcolladotor almost 4 years ago - 7 comments

#13 - Variability in gene expression between sACC and AMYG

Issue - State: closed - Opened by lcolladotor almost 4 years ago - 7 comments

#12 - Volcano plots by brain region

Issue - State: closed - Opened by lcolladotor almost 4 years ago - 1 comment

#12 - Volcano plots by brain region

Issue - State: closed - Opened by lcolladotor almost 4 years ago - 1 comment

#11 - Hub genes and DE genes

Issue - State: closed - Opened by lcolladotor almost 4 years ago - 1 comment

#10 - Microglia and DE genes

Issue - State: closed - Opened by lcolladotor almost 4 years ago - 3 comments

#9 - WGCNA and brain regions

Issue - State: closed - Opened by lcolladotor almost 4 years ago

#8 - DE t-stats between sACC and Amyg

Issue - State: closed - Opened by lcolladotor almost 4 years ago

#7 - Preform Deconvolution with Bisque

Issue - State: closed - Opened by lahuuki almost 4 years ago - 2 comments

#6 - Enrichment tests on TWAS FDR < 5% genes

Issue - State: closed - Opened by aseyedia about 4 years ago - 15 comments

#5 - Export TWAS results to a table

Issue - State: closed - Opened by lcolladotor over 4 years ago - 6 comments

#4 - TWAS: sACC vs Amygdala + TWAS vs case-control signal

Issue - State: closed - Opened by lcolladotor over 4 years ago - 30 comments

#3 - Re-create Gandal et al 2018 figure

Issue - State: closed - Opened by lcolladotor over 4 years ago - 9 comments

#2 - PGC TWAS results into a single Rdata file

Issue - State: closed - Opened by lcolladotor over 4 years ago - 3 comments

#1 - Failure to generate multiple histogram plots

Issue - State: closed - Opened by aseyedia over 4 years ago - 1 comment