GitHub / lcolladotor issue stats
Total issues: 675
Total pull requests: 63
Merged pull request: 51
Average time to close issues: 4 months
Average time to close pull requests: 10 days
Average comments per issue: 1.91
Average comments per pull request: 1.35
Issues created
- lieberinstitute/visium_spg_ad: 71
- lieberinstitute/spatialdlpfc: 69
- LieberInstitute/spatialLIBD: 44
- LieberInstitute/qsvaR: 33
- lieberinstitute/speaqeasy: 32
- lieberinstitute/brainseq_phase2: 30
- lieberinstitute/spatial_hpc: 23
- lieberinstitute/rnaseq-pipeline: 22
- ComunidadBioInfo/regutools: 19
- lieberinstitute/brain-epigenomics: 16
- LieberInstitute/recount3: 16
- lieberinstitute/smoking-nicotine-mouse: 14
- jimhester/knitrBootstrap: 13
- lcolladotor/derfinder: 13
- lieberinstitute/vistoseg: 11
- lieberinstitute/zandihyde_bipolar_rnaseq: 11
- lieberinstitute/treg: 10
- lieberinstitute/qsva_brain: 10
- lieberinstitute/dlpfc_snrnaseq: 10
- lcolladotor/biocthis: 10
- lieberinstitute/deconvobuddies: 9
- rafalab/bumphunter: 9
- drighelli/spatialexperiment: 8
- lieberinstitute/speaqeasy-example: 8
- lieberinstitute/habenula_pilot: 7
- leekgroup/recount: 7
- leekgroup/regionReport: 6
- lieberinstitute/goeshyde_mdd_rnaseq: 6
- lieberinstitute/10xpilot_snrnaseq-human: 5
- isee/isee: 5
- Bioconductor/BiocStyle: 4
- lieberinstitute/recount-brain: 4
- neurogenomics/rworkflows: 4
- Bioconductor/BiocCheck: 3
- lieberinstitute/jaffelab: 3
- lieberinstitute/visiumstitched: 3
- ntdyjack/fasthplus: 3
- lieberinstitute/septum_lateral: 3
- nellore/rail: 3
- edward130603/BayesSpace: 3
- jbryer/rgitbook: 3
- lcolladotor/mphcapstoneta: 3
- aoles/deformats: 2
- lcolladotor/rnaseq_lcg-unam_2024: 2
- lieberinstitute/recount3-docs: 2
- craigcitro/r-travis: 2
- cboettig/knitcitations: 2
- Bioconductor/BiocWorkshops2019: 2
- rocker-org/rocker-versioned2: 2
- lieberinstitute/sgejobs: 2
- lieberinstitute/dbfinder: 2
- jtleek/protocols: 2
- Bioconductor/BioC2020: 2
- ltla/scuttle: 2
- ramnathv/rMaps: 2
- jimhester/regular: 2
- lcolladotor/osca_liigh_unam_2020: 2
- lmweber/locus-c: 2
- almahmoud/gha-build: 1
- cloudyr/rmote: 1
- Bioconductor/Contributions: 1
- weitzner/jhu-thesis-template: 1
- carriewright11/ttester: 1
- r-lib/sessioninfo: 1
- seandavi/biocpkgtools: 1
- ropensci-archive/rfigshare: 1
- lmweber/osta-resources: 1
- lcolladotor/cshl_rstats_genome_scale_2024: 1
- r-lib/desc: 1
- frankkramer-lab/rbiopaxparser: 1
- jtleek/datawomenontwitter: 1
- r-lib/pkgdown: 1
- lawremi/rtracklayer: 1
- lieberinstitute/jaffe_onboarding: 1
- andrewcharlesjones/spatial-alignment: 1
- simonpcouch/pal: 1
- dzhang32/dasper: 1
- earmingol/singlecell-ccc: 1
- rstudio/blogdown: 1
- eddelbuettel/rcppannoy: 1
- lieberinstitute/globus: 1
- r-lib/gitcreds: 1
- seankross/postcards: 1
- ltla/scrnaseq: 1
- rstudio/shiny-examples: 1
- lieberinstitute/visiumstitched_brain: 1
- kevinrue/orca: 1
- lmweber/osta: 1
- lawremi/ggbio: 1
- posit-dev/air: 1
- lcolladotor/gwasanalysis: 1
- lieberinstitute/biocmap: 1
- gpertea/stringtie: 1
- Bioconductor/AnnotationHubData: 1
- lieberinstitute/human_dlpfc_deconvolution: 1
- grimbough/code.bioconductor.org: 1
- lieberinstitute/smokingmouse: 1
- christopherwilks/snaptron: 1
- andrewejaffe/summerr_2015: 1
- divinedominion/criticmarkup.tmbundle: 1
- Bioconductor/HubPub: 1
- opencasestudies/ocs-healthexpenditure: 1
- Bioconductor/BiocFileCache: 1
- lieberinstitute/template_project: 1
- r-lib/usethis: 1
- brry/berryFunctions: 1
- jravilab/jravilab.github.io: 1
- Bioconductor/bioconductor.org: 1
- r-lib/covr: 1
- pachterlab/museumst: 1
- lcolladotor/rnaseq_lcg-unam_2025: 1
- jtleek/rpackages: 1
- leekgroup/derfinderPlot: 1
- lieberinstitute/shinycsv: 1
- wch/downloader: 1
Pull requests created
- lmweber/osta: 12
- lcolladotor/derfinder: 8
- jtleek/protocols: 6
- rafalab/bumphunter: 5
- jtleek/jtleek.github.io: 3
- vubiostat/knitr.tmbundle: 3
- jimhester/knitrBootstrap: 2
- muschellij2/hopstat: 2
- Bioconductor/bioconductor.org: 2
- drighelli/spatialexperiment: 2
- muschellij2/cluster_xml_2014: 1
- ipw012/river: 1
- krotosbenjamin/eqtl_analysis_tutorial: 1
- LieberInstitute/spatialLIBD: 1
- divinedominion/criticmarkup.tmbundle: 1
- snystrom/cmdfun: 1
- craigcitro/r-travis: 1
- yihui/travis-exitwp: 1
- isee/isee: 1
- Bioconductor/AnnotationHubData: 1
- nellore/rail: 1
- jtleek/rpackages: 1
- hansenlab/bsseq: 1
- weitzner/jhu-thesis-template: 1
- lcolladotor/biocthis: 1
- muschellij2/jhsph_finances: 1
- r-lib/pkgdown: 1
- rocker-org/rocker-versioned2: 1
Maintainer
- lieberinstitute/visium_spg_ad: 71
- lieberinstitute/spatialdlpfc: 69
- LieberInstitute/spatialLIBD: 45
- LieberInstitute/qsvaR: 33
- lieberinstitute/speaqeasy: 32
- lieberinstitute/brainseq_phase2: 30
- lieberinstitute/spatial_hpc: 23
- lieberinstitute/rnaseq-pipeline: 22
- lcolladotor/derfinder: 21
- ComunidadBioInfo/regutools: 19
- LieberInstitute/recount3: 16
- lieberinstitute/brain-epigenomics: 16
- lieberinstitute/smoking-nicotine-mouse: 14
- lieberinstitute/zandihyde_bipolar_rnaseq: 11
- lieberinstitute/vistoseg: 11
Issue Author Associations
- Member (517, 76.59%)
- None (69, 10.22%)
- Contributor (47, 6.96%)
- Owner (33, 4.89%)
- Collaborator (9, 1.33%)
Pull Request Author Associations
- Contributor (30, 47.62%)
- None (21, 33.33%)
- Owner (9, 14.29%)
- Collaborator (2, 3.17%)
- Member (1, 1.59%)
Top Issue Labels
- enhancement (65)
- spot-deconvolution (11)
- shiny apps (8)
- External gene sets (7)
- help wanted (7)
- documentation (6)
- snRNA-seq (5)
- data sharing (5)
- bug (1)
- SpatialLIBD (1)
- optional (1)
- gene_set_enrichment (1)
- depends on new monorail output (1)
- publish (1)
- crosslet (1)