Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / lieberinstitute/vistoseg issues and pull requests

#20 - splitSlide show error messages

Issue - State: open - Opened by lihuamei 9 months ago

#19 - Error while running the corrected countSpots_centroid.m code

Issue - State: closed - Opened by Ukaipa9 over 1 year ago - 1 comment

#18 - Clarify the docs due to differences between Visium and Visium SPG processing pipeline steps

Issue - State: open - Opened by lcolladotor almost 2 years ago - 2 comments

#17 - Update citation information

Issue - State: closed - Opened by lcolladotor almost 2 years ago - 1 comment

#16 - Getting cropped spot images

Issue - State: closed - Opened by ahmetrifaioglu about 2 years ago - 1 comment

#15 - update countSpots() function to count nuclei/spot based on centroid of nuclei

Issue - State: closed - Opened by madhavitippani over 2 years ago - 1 comment

#14 - create thresholding function based on refineVNS() metric.csv output

Issue - State: open - Opened by madhavitippani over 2 years ago

#13 - update refineVNS() to provide csv with shape and size metrics

Issue - State: closed - Opened by madhavitippani over 2 years ago - 1 comment

#12 - fine tuning segmentation step

Issue - State: closed - Opened by skim245 almost 3 years ago - 4 comments

#11 - image requirements

Issue - State: closed - Opened by skim245 almost 3 years ago - 1 comment

#10 - Reviews are back

Issue - State: closed - Opened by stephaniehicks over 3 years ago - 2 comments

#9 - bookdown info

Issue - State: closed - Opened by lcolladotor almost 4 years ago

#8 - OSTA vs the documentation in this repo

Issue - State: closed - Opened by lcolladotor almost 4 years ago

#7 - Write a short paper about your software

Issue - State: closed - Opened by lcolladotor almost 4 years ago

#6 - Be more verbose and describe code chunks

Issue - State: closed - Opened by lcolladotor almost 4 years ago - 1 comment

#5 - Avoid full paths

Issue - State: closed - Opened by lcolladotor almost 4 years ago

#4 - Add software requirements

Issue - State: closed - Opened by lcolladotor almost 4 years ago

#3 - Citation information and software name

Issue - State: closed - Opened by lcolladotor almost 4 years ago

#2 - Explain how to download the data used in this documentation

Issue - State: closed - Opened by lcolladotor almost 4 years ago - 2 comments

#1 - Explain Visium and/or the data used in this documentation

Issue - State: closed - Opened by lcolladotor almost 4 years ago