Ecosyste.ms: Issues

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GitHub / kristyhoran/bohra issues and pull requests

#17 - Example commands needed updates

Issue - State: open - Opened by changxuling about 2 years ago

#16 - Header issue in assembly.txt output

Issue - State: open - Opened by cgorrie over 2 years ago

#15 - Nextflow

Pull Request - State: closed - Opened by kristyhoran about 3 years ago

#14 - Error in installation instructions

Issue - State: open - Opened by Koen-vdl about 3 years ago

#13 - Ignore errors

Issue - State: open - Opened by shimbalama about 3 years ago

#10 - Kraken DBs no longer exist, new URL

Issue - State: open - Opened by tseemann over 4 years ago

#9 - job execution failed

Issue - State: open - Opened by mabouelk over 4 years ago

#8 - Enhancement: Add a quiet or reduced verbosity option

Issue - State: open - Opened by taiaroa about 5 years ago

#7 - Add in cluster.json and snakemake on slurm command

Issue - State: open - Opened by kristyhoran about 5 years ago
Labels: enhancement

#6 - error in unpzip

Issue - State: closed - Opened by kristyhoran about 5 years ago
Labels: bug

#5 - error in -n dry-run

Issue - State: closed - Opened by kristyhoran about 5 years ago
Labels: bug

#4 - Note that FASTA reference cannot be gzipped

Issue - State: open - Opened by pansapiens about 5 years ago - 1 comment

#3 - Add note about Kraken2 database requirement

Pull Request - State: closed - Opened by pansapiens about 5 years ago

#2 - Input tsv file requires absolute paths to reads

Issue - State: closed - Opened by pansapiens about 5 years ago - 2 comments

#1 - Add snp-dists to dependencies list

Pull Request - State: closed - Opened by pansapiens about 5 years ago