incatools/semantic-sql issues and pull requests

#91 - Adding overrides for SWO prefixes.

Pull Request - State: open - Opened by cmungall about 2 months ago

#90 - additional sources2

Pull Request - State: closed - Opened by cmungall about 2 months ago

#89 - additional sources

Pull Request - State: closed - Opened by cmungall 3 months ago

#88 - Update README.md

Pull Request - State: closed - Opened by cmungall 4 months ago

#87 - relation-graph errors when creating db

Issue - State: closed - Opened by wdduncan 4 months ago - 2 comments

#86 - Adding OMIM. See https://github.com/monarch-initiative/malco/issues/16

Pull Request - State: open - Opened by cmungall 5 months ago

#85 - Adding 5 Allen brain atlas ontologies.

Pull Request - State: open - Opened by cmungall 5 months ago

#84 - Added SDGIO

Pull Request - State: closed - Opened by cmungall 5 months ago

#83 - Updating OEO URL.

Pull Request - State: closed - Opened by cmungall 5 months ago

#82 - Add a duckdb export or convert base layer to duckdb

Issue - State: open - Opened by cmungall 5 months ago

#81 - Adding phenio-test

Pull Request - State: closed - Opened by cmungall 7 months ago

#80 - Update README.md

Pull Request - State: closed - Opened by turbomam 8 months ago - 1 comment

#79 - Use `https://s3.amazonaws.com/bbop-sqlite/hp.db.gz` as an example S3 download, not `https://s3.amazonaws.com/bbop-sqlite/hp.db`

Issue - State: closed - Opened by turbomam 8 months ago - 1 comment

#78 - Updates for the README

Pull Request - State: closed - Opened by caufieldjh 8 months ago

#77 - Add some prefixes to prefixes_curated.csv

Pull Request - State: closed - Opened by matentzn 10 months ago

#76 - Update ontology builds in S3 bucket

Issue - State: closed - Opened by rsgoncalves about 1 year ago - 3 comments

#75 - Additional sources

Pull Request - State: closed - Opened by cmungall over 1 year ago

#74 - Add license to repository to facilitate reuse

Issue - State: closed - Opened by rsgoncalves over 1 year ago

#73 - Split production Makefile from user Makefile

Pull Request - State: closed - Opened by cmungall over 1 year ago

#72 - under some circumstances using semsql make can result in core config files being rebuilt

Issue - State: closed - Opened by cmungall over 1 year ago

#71 - Weird offset in picking prefixes

Issue - State: closed - Opened by matentzn over 1 year ago - 2 comments
Labels: bug

#70 - Fix generation of prefixes yaml for custom prefix maps

Pull Request - State: closed - Opened by cmungall over 1 year ago

#69 - Allow prefixes pass-thru.

Pull Request - State: closed - Opened by cmungall over 1 year ago

#68 - node identifiers

Pull Request - State: closed - Opened by cmungall over 1 year ago

#67 - Sometimes creates `X.db.tmp` but not `X.db`

Issue - State: closed - Opened by joeflack4 over 1 year ago - 2 comments

#66 - node identifiers

Pull Request - State: closed - Opened by cmungall over 1 year ago

#65 - node identifiers

Pull Request - State: closed - Opened by cmungall almost 2 years ago

#64 - Improve speed of converting SQLite to FHIR

Issue - State: open - Opened by joeflack4 almost 2 years ago - 2 comments

#63 - Create a demo of querying OBO in SQL in the browser using sql.js

Issue - State: open - Opened by cmungall almost 2 years ago - 4 comments

#62 - First pass at PyOBO ingest.

Pull Request - State: closed - Opened by cmungall almost 2 years ago

#61 - Add orcid.owl to repository

Issue - State: closed - Opened by cmungall almost 2 years ago

#60 - Refactor to use relation-graph TSV output

Pull Request - State: closed - Opened by cmungall almost 2 years ago

#59 - Failed to build SQLite database from OWL file

Issue - State: closed - Opened by vdancik almost 2 years ago - 3 comments

#58 - create MLO

Pull Request - State: closed - Opened by realmarcin almost 2 years ago

#57 - regen

Pull Request - State: closed - Opened by cmungall almost 2 years ago

#56 - Empty `.db` file created

Issue - State: closed - Opened by joeflack4 about 2 years ago - 1 comment

#55 - registry

Pull Request - State: closed - Opened by cmungall about 2 years ago

#54 - registry

Pull Request - State: closed - Opened by cmungall about 2 years ago

#53 - added ICD as prefixes

Pull Request - State: closed - Opened by hrshdhgd about 2 years ago

#52 - Additional sources

Pull Request - State: closed - Opened by cmungall about 2 years ago

#51 - Make semsql prefix maps configurable

Issue - State: open - Opened by matentzn about 2 years ago - 4 comments

#50 - Add semsql CLI docs

Issue - State: open - Opened by matentzn about 2 years ago

#49 - docker docs

Pull Request - State: closed - Opened by cmungall about 2 years ago

#48 - Database created is empty

Issue - State: closed - Opened by joeflack4 about 2 years ago - 3 comments

#47 - Left over intermediate artefacts

Issue - State: open - Opened by joeflack4 about 2 years ago - 5 comments

#46 - SQLite console opens (0.1.7)

Issue - State: open - Opened by joeflack4 about 2 years ago - 4 comments

#45 - Include PyOBO products

Issue - State: open - Opened by cmungall about 2 years ago - 6 comments

#44 - adding reacto

Pull Request - State: closed - Opened by cmungall about 2 years ago