hemberg-lab/scmap issues and pull requests

#40 - Add 'codetools' to Suggests:

Issue - State: open - Opened by HenrikBengtsson over 1 year ago

#39 - Questions about confidence scores

Issue - State: open - Opened by Kevis9 almost 2 years ago

#38 - Quite low accuracy using index cluster

Issue - State: open - Opened by Kevis9 over 2 years ago - 2 comments

#37 - Error on scmapCell

Issue - State: closed - Opened by FionaMoon almost 3 years ago - 1 comment

#36 - What kind of reference dataset can be use?

Issue - State: closed - Opened by FionaMoon almost 3 years ago - 2 comments

#35 - Error using scmapCluster

Issue - State: closed - Opened by GabrielBaldissera about 3 years ago - 2 comments

#34 - Big dataset issue

Issue - State: open - Opened by Diennguyen8290 about 3 years ago - 7 comments

#33 - Heat map missing data

Issue - State: open - Opened by ivanaarellano over 3 years ago - 2 comments

#32 - How should I import data from seurat to scmap?

Issue - State: open - Opened by jsonProgram over 3 years ago

#31 - error on selectFeatures

Issue - State: open - Opened by kehuangke over 3 years ago - 5 comments

#30 - Encountering problems with selectFeatures

Issue - State: open - Opened by sagnikbanerjee15 over 3 years ago - 1 comment

#29 - error in selectFeatures

Issue - State: closed - Opened by pongslepha over 3 years ago - 1 comment

#28 - Similarity values are not between 0 and 1

Issue - State: open - Opened by hayfre over 3 years ago - 4 comments

#27 - Issue with scmap-cluster function output/ Variable inconsistent assignment

Issue - State: open - Opened by finjen almost 4 years ago - 2 comments

#26 - Cancer tumor reference dataset

Issue - State: open - Opened by levinhein over 4 years ago - 2 comments

#25 - Different number of elements passed to dot() function by scmapCell

Issue - State: closed - Opened by jma1991 over 4 years ago - 1 comment

#24 - broken URL in README

Issue - State: closed - Opened by evanbiederstedt over 4 years ago - 4 comments

#23 - problem with scmapCluster

Issue - State: closed - Opened by ninggongzi over 4 years ago - 3 comments

#22 - scmapCell error

Issue - State: open - Opened by yuqiyuqitan about 5 years ago - 1 comment

#21 - Outdated References

Issue - State: closed - Opened by DarioS about 5 years ago - 1 comment

#20 - sort similarities and indexes

Pull Request - State: open - Opened by Arlene-1998 about 5 years ago - 1 comment

#19 - Question about using sorted cell bulk microarray data (ImmGen) as reference

Issue - State: closed - Opened by atakanekiz about 5 years ago - 1 comment

#18 - Poor self-mapping with SMART-seq data

Issue - State: open - Opened by a-solovyev12 about 5 years ago - 1 comment

#17 - large part of the heatmap of select features is blank

Issue - State: open - Opened by Jiam1ng over 5 years ago - 6 comments

#16 - Problem with selectFeatures

Issue - State: open - Opened by massonix over 5 years ago - 5 comments

#15 - Why are the clusters of the reference dataset changed?

Issue - State: closed - Opened by xbjie123 about 6 years ago - 6 comments

#14 - not able to plot sankey diagram

Issue - State: closed - Opened by MichaelPeibo about 6 years ago - 4 comments

#13 - selectFeatures() Error

Issue - State: closed - Opened by lololiam over 6 years ago - 9 comments

#12 - getSankey function

Issue - State: open - Opened by aopisco almost 7 years ago - 1 comment

#11 - how close from a cluster is something unassigned?

Issue - State: open - Opened by aopisco almost 7 years ago - 2 comments

#10 - Investigating bad self-mapping of a dataset

Issue - State: closed - Opened by mxposed almost 7 years ago - 4 comments

#9 - Normalisation best practices

Issue - State: closed - Opened by mxposed almost 7 years ago - 3 comments

#8 - Are SVM/RF implementations available through scmap?

Issue - State: open - Opened by CodeInTheSkies almost 7 years ago - 2 comments
Labels: enhancement

#7 - Saving the Sankey Diagram as a PDF file

Issue - State: closed - Opened by CodeInTheSkies almost 7 years ago - 4 comments

#6 - Some general questions about scmap

Issue - State: closed - Opened by CodeInTheSkies almost 7 years ago - 2 comments

#5 - Order of cells in "scmapCluster_results$scmap_cluster_labs"

Issue - State: open - Opened by CodeInTheSkies almost 7 years ago - 1 comment
Labels: enhancement

#4 - scmap and RF/SVM comparisons

Issue - State: closed - Opened by CodeInTheSkies almost 7 years ago - 5 comments

#3 - Feature selection

Issue - State: closed - Opened by davetang almost 7 years ago - 2 comments

#2 - trouble installing scmap

Issue - State: closed - Opened by dat4git over 7 years ago - 3 comments

#1 - scfinemap

Pull Request - State: closed - Opened by ay2sanger over 7 years ago

GitHub / hemberg-lab/scmap issues and pull requests