Ecosyste.ms: Issues

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GitHub / cov-lineages/pangolearn issues and pull requests

#46 - Merge Prerelease v1.2.93

Pull Request - State: closed - Opened by rmcolq about 3 years ago

#46 - Merge Prerelease v1.2.93

Pull Request - State: closed - Opened by rmcolq about 3 years ago

#43 - Prerelease 1.2.91

Pull Request - State: closed - Opened by rmcolq about 3 years ago

#43 - Prerelease 1.2.91

Pull Request - State: closed - Opened by rmcolq about 3 years ago

#42 - Correcting annotation of P.1.10 -- was missing C1427T.

Pull Request - State: closed - Opened by AngieHinrichs about 3 years ago

#42 - Correcting annotation of P.1.10 -- was missing C1427T.

Pull Request - State: closed - Opened by AngieHinrichs about 3 years ago

#41 - Revert last unintended merge of v1.2.91 lineageTree.pb to master

Pull Request - State: closed - Opened by AngieHinrichs about 3 years ago

#41 - Revert last unintended merge of v1.2.91 lineageTree.pb to master

Pull Request - State: closed - Opened by AngieHinrichs about 3 years ago

#37 - pangoLEARN model for pango-designation release v1.2.88

Pull Request - State: closed - Opened by aineniamh about 3 years ago

#36 - Quokka feature selection

Pull Request - State: closed - Opened by emilyscher about 3 years ago

#36 - Quokka feature selection

Pull Request - State: closed - Opened by emilyscher about 3 years ago

#32 - Why is Usher mode not made primary mode for GISAID etc?

Issue - State: open - Opened by corneliusroemer about 3 years ago - 19 comments

#32 - Why is Usher mode not made primary mode for GISAID etc?

Issue - State: open - Opened by corneliusroemer about 3 years ago - 19 comments

#31 - When do you plan to release again?

Issue - State: closed - Opened by corneliusroemer about 3 years ago - 1 comment

#31 - When do you plan to release again?

Issue - State: closed - Opened by corneliusroemer about 3 years ago - 1 comment

#30 - Dead Link in Releases and Cov-Lineages.org page

Issue - State: closed - Opened by DBecker7 about 3 years ago - 4 comments

#30 - Dead Link in Releases and Cov-Lineages.org page

Issue - State: closed - Opened by DBecker7 about 3 years ago - 4 comments

#29 - maintenance of list for latest AY sub-lineage defining mutations

Issue - State: closed - Opened by matt-sd-watson about 3 years ago - 3 comments

#29 - maintenance of list for latest AY sub-lineage defining mutations

Issue - State: closed - Opened by matt-sd-watson about 3 years ago - 3 comments

#25 - lineageTree.pb update (still v1.2.60; rerooting)

Pull Request - State: closed - Opened by AngieHinrichs about 3 years ago

#25 - lineageTree.pb update (still v1.2.60; rerooting)

Pull Request - State: closed - Opened by AngieHinrichs about 3 years ago

#24 - Training FASTAs

Issue - State: closed - Opened by victormaricato over 3 years ago - 1 comment

#24 - Training FASTAs

Issue - State: closed - Opened by victormaricato over 3 years ago - 1 comment

#21 - C.36.3 and AY.2 not found

Issue - State: closed - Opened by AKWB over 3 years ago - 2 comments

#21 - C.36.3 and AY.2 not found

Issue - State: closed - Opened by AKWB over 3 years ago - 2 comments

#20 - B.1.1.397 scoring metrics

Issue - State: closed - Opened by victormaricato over 3 years ago - 1 comment

#20 - B.1.1.397 scoring metrics

Issue - State: closed - Opened by victormaricato over 3 years ago - 1 comment

#19 - Updated to recent new lineages in release 2021-06-05; more fixes

Pull Request - State: closed - Opened by AngieHinrichs over 3 years ago

#19 - Updated to recent new lineages in release 2021-06-05; more fixes

Pull Request - State: closed - Opened by AngieHinrichs over 3 years ago

#18 - pangoLEARN update

Issue - State: closed - Opened by santoshe1 over 3 years ago - 5 comments
Labels: duplicate

#18 - pangoLEARN update

Issue - State: closed - Opened by santoshe1 over 3 years ago - 5 comments
Labels: duplicate

#17 - Second batch of fixes for pangolin issue 217

Pull Request - State: closed - Opened by AngieHinrichs over 3 years ago

#17 - Second batch of fixes for pangolin issue 217

Pull Request - State: closed - Opened by AngieHinrichs over 3 years ago

#16 - First batch of fixes for pangolin issue 217

Pull Request - State: closed - Opened by AngieHinrichs over 3 years ago

#16 - First batch of fixes for pangolin issue 217

Pull Request - State: closed - Opened by AngieHinrichs over 3 years ago

#15 - pangoLEARN python code causes flake8 issue

Issue - State: closed - Opened by pvanheus over 3 years ago - 1 comment

#15 - pangoLEARN python code causes flake8 issue

Issue - State: closed - Opened by pvanheus over 3 years ago - 1 comment

#14 - Problem with lineage P.1.2

Issue - State: closed - Opened by aplamarca over 3 years ago - 2 comments

#14 - Problem with lineage P.1.2

Issue - State: closed - Opened by aplamarca over 3 years ago - 2 comments

#13 - decision_tree_rules.txt rules seem wrong

Issue - State: open - Opened by danielmoney over 3 years ago - 12 comments

#13 - decision_tree_rules.txt rules seem wrong

Issue - State: open - Opened by danielmoney over 3 years ago - 12 comments

#12 - Update lineageTree.pb (2021-05-23)

Pull Request - State: closed - Opened by AngieHinrichs over 3 years ago

#12 - Update lineageTree.pb (2021-05-23)

Pull Request - State: closed - Opened by AngieHinrichs over 3 years ago

#11 - Error after the latest release 2021-04-28

Issue - State: closed - Opened by animesh-workplace over 3 years ago - 5 comments

#11 - Error after the latest release 2021-04-28

Issue - State: closed - Opened by animesh-workplace over 3 years ago - 5 comments

#10 - Would you add the VUI B.1.617 please?

Issue - State: closed - Opened by xzhub over 3 years ago - 3 comments

#10 - Would you add the VUI B.1.617 please?

Issue - State: closed - Opened by xzhub over 3 years ago - 3 comments

#9 - pangolin version in __init__.py is not updated

Issue - State: closed - Opened by AKWB over 3 years ago - 2 comments

#9 - pangolin version in __init__.py is not updated

Issue - State: closed - Opened by AKWB over 3 years ago - 2 comments

#8 - Lineage recall report is not updated

Issue - State: closed - Opened by aretchless over 3 years ago - 1 comment

#8 - Lineage recall report is not updated

Issue - State: closed - Opened by aretchless over 3 years ago - 1 comment

#7 - show pango-designation version when using pangolin/pangoLEARN

Issue - State: closed - Opened by TYMichaelsen over 3 years ago - 2 comments

#7 - show pango-designation version when using pangolin/pangoLEARN

Issue - State: closed - Opened by TYMichaelsen over 3 years ago - 2 comments

#6 - B.1.562.3 not found

Issue - State: closed - Opened by AKWB over 3 years ago - 1 comment

#6 - B.1.562.3 not found

Issue - State: closed - Opened by AKWB over 3 years ago - 1 comment

#5 - The `__version__` is not updated for 2021-04-23

Issue - State: closed - Opened by philiptzou over 3 years ago - 1 comment

#5 - The `__version__` is not updated for 2021-04-23

Issue - State: closed - Opened by philiptzou over 3 years ago - 1 comment

#4 - header in the new decision_tree_rules.txt stored twice(-)

Issue - State: open - Opened by igortru over 3 years ago

#3 - which reference used in decision tree?

Issue - State: closed - Opened by igortru almost 4 years ago - 1 comment

#2 - 2021-01-11 release

Issue - State: closed - Opened by andersgs almost 4 years ago - 2 comments

#1 - supporting data request

Issue - State: closed - Opened by AKWB almost 4 years ago - 1 comment