colelyman/kleuren issues and pull requests

#38 - BloomFilterTrie integration

Pull Request - State: closed - Opened by Colelyman over 6 years ago

#37 - git submodule update failing

Issue - State: open - Opened by tseemann about 7 years ago - 1 comment

#36 - Make a "pre release"

Issue - State: open - Opened by tseemann about 7 years ago - 2 comments

#35 - Docs

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#34 - Test

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#33 - Implementation

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#32 - Msa

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#31 - Test

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#30 - Implementation

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#29 - Implementation

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#28 - Implementation

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#27 - Segmentation Fault- Driver::run() getting ColorSet

Issue - State: closed - Opened by Colelyman over 7 years ago - 1 comment

#26 - Fixed some bugs with runSharedKmerCount and added tests

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#25 - Implement shared kmer counting between paths

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#24 - Refactored how Path's are stored in a Bubble.

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#23 - Test

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#22 - Added a new constructor to ColorSet that automatically sets n.

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#21 - Changed the call from allContainsKmer to nContainsKmer

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#20 - Implementation

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#19 - Created the ColorManager test case.

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#18 - Implemented the parsing of the color file.

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#17 - Test

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#16 - Implementation

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#15 - Test

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#14 - Extending path with branching nodes

Issue - State: closed - Opened by Colelyman over 7 years ago

#13 - Stack overflow in `recursiveExtend` helper method

Issue - State: closed - Opened by Colelyman over 7 years ago - 1 comment

#13 - Stack overflow in `recursiveExtend` helper method

Issue - State: closed - Opened by Colelyman over 7 years ago - 1 comment

#12 - Extending path with identical start and end kmer

Issue - State: closed - Opened by Colelyman over 7 years ago

#11 - Refactored numContainsKmer to return size_t instead of int.

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#10 - Test

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#9 - Removed passing in the kmer length to the Path and subsequently the B…

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#8 - Implementation

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#7 - Test

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#6 - Implemented loading the FMIndex in color and setting the name.

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#5 - Implementation

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#4 - Implementation

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#3 - Implementation

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#2 - Headers

Pull Request - State: closed - Opened by Colelyman over 7 years ago

#1 - Headers

Pull Request - State: closed - Opened by Colelyman over 7 years ago

GitHub / colelyman/kleuren issues and pull requests