Ecosyste.ms: Issues

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GitHub / bio2bel/expasy issues and pull requests

#30 - Update for PyBEL v0.12.*

Pull Request - State: closed - Opened by cthoyt almost 6 years ago - 1 comment

#29 - Add additional information to Enzyme data model

Issue - State: open - Opened by cthoyt over 6 years ago

#28 - Test prosite enrichment

Issue - State: closed - Opened by cthoyt almost 7 years ago
Labels: testing

#27 - Add bumpversion config

Issue - State: closed - Opened by cthoyt almost 7 years ago

#26 - Create sphinx directory

Issue - State: closed - Opened by cthoyt almost 7 years ago

#25 - Add documentation for expasy_parser

Issue - State: closed - Opened by cthoyt almost 7 years ago
Labels: documentation

#24 - Missing docstring in enrich_children_classes

Issue - State: closed - Opened by cthoyt almost 7 years ago
Labels: documentation

#23 - Add type to documentation

Issue - State: closed - Opened by cthoyt almost 7 years ago
Labels: bug, documentation

#22 - Fix docstring format

Issue - State: closed - Opened by cthoyt almost 7 years ago
Labels: bug, documentation

#21 - Docstring for non_standard_ec_id

Issue - State: closed - Opened by cthoyt almost 7 years ago
Labels: documentation

#20 - Docstring for give_edge

Issue - State: closed - Opened by cthoyt almost 7 years ago
Labels: documentation

#19 - Docstring for edge_description

Issue - State: closed - Opened by cthoyt almost 7 years ago
Labels: documentation

#18 - Clobbered built-in str

Issue - State: closed - Opened by cthoyt almost 7 years ago
Labels: bug

#17 - Enzyme.parent holds children.

Issue - State: closed - Opened by aramgrigoryan almost 7 years ago - 3 comments
Labels: bug

#16 - Externalize string constants

Issue - State: closed - Opened by cthoyt almost 7 years ago

#15 - Parent not populated in database

Issue - State: closed - Opened by cthoyt almost 7 years ago - 2 comments
Labels: bug

#14 - Update unit tests

Issue - State: closed - Opened by aramgrigoryan almost 7 years ago

#13 - Use a SQLAlchemy relationship for children

Issue - State: closed - Opened by cthoyt almost 7 years ago - 1 comment
Labels: enhancement

#12 - Fill out all rtype in manager

Issue - State: closed - Opened by cthoyt almost 7 years ago
Labels: documentation

#11 - Use SQLAlchemy ORM to get object properties

Issue - State: closed - Opened by cthoyt almost 7 years ago - 1 comment
Labels: style

#10 - Code style: Rename arguments

Issue - State: closed - Opened by cthoyt almost 7 years ago
Labels: style

#9 - Code style: Reuse variables

Issue - State: closed - Opened by cthoyt almost 7 years ago
Labels: style

#8 - Add sample pyuniprot data to include in testing

Issue - State: closed - Opened by cthoyt almost 7 years ago - 2 comments
Labels: wontfix

#7 - Update README

Issue - State: closed - Opened by cthoyt about 7 years ago

#6 - Enrich BELGraph function

Issue - State: closed - Opened by cthoyt about 7 years ago - 4 comments

#5 - Use PyUniProt to incorporate members of Enzyme classes

Issue - State: closed - Opened by cthoyt about 7 years ago - 5 comments

#4 - Code clean up

Issue - State: closed - Opened by cthoyt about 7 years ago

#3 - Tox and .travis.yml files to automate testing

Issue - State: closed - Opened by cthoyt about 7 years ago - 2 comments

#2 - Output class tree as BEL

Issue - State: closed - Opened by cthoyt about 7 years ago

#1 - Create regular expression to match enzyme codes

Issue - State: closed - Opened by cthoyt about 7 years ago