Ecosyste.ms: Issues
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GitHub / bernatgel/CopyNumberPlots issues and pull requests
#22 - plotCopyNumberCalls Error in as.vector(x, mode = "logical") : no method for coercing this S4 class to a vector
Issue -
State: open - Opened by ChristianRohde almost 2 years ago
- 1 comment
Labels: bug
#21 - fixed mcols call
Pull Request -
State: closed - Opened by miriammagallon over 2 years ago
#20 - Allow User to Set Copy Number Plotting Thresholds
Issue -
State: open - Opened by DarioS over 3 years ago
#19 - Added file.type parameter to load .cnr files and Added a workaround to correctly load .seg files
Pull Request -
State: closed - Opened by miriammagallon over 4 years ago
#18 - Problem loading CNVkit Copy number calls
Issue -
State: open - Opened by moldach almost 5 years ago
- 5 comments
Labels: bug, Usage Question
#17 - added zero-based parameter to loadCopyNumber calls functions. Fixed loh.vaules parameter when using plotCopyNumberCalls
Pull Request -
State: closed - Opened by miriammagallon about 5 years ago
#16 - plotLRR: allow different colors (if wanted) when supplying a GRangesList
Issue -
State: open - Opened by lbeltrame about 5 years ago
- 1 comment
Labels: bug, enhancement
#15 - Functions to plot copy number segments
Issue -
State: open - Opened by lbeltrame about 5 years ago
- 5 comments
Labels: enhancement, Usage Question
#14 - corrected the harcoded parameter genome
Pull Request -
State: closed - Opened by miriammagallon about 5 years ago
- 1 comment
#13 - toGRanges TryCatch function modification: Not to catch Warning messages
Pull Request -
State: closed - Opened by miriammagallon over 5 years ago
#12 - Added some modifications to utils.R functions after testing some of them
Pull Request -
State: closed - Opened by miriammagallon over 5 years ago
#11 - Implementation of prepareLabels
Pull Request -
State: closed - Opened by miriammagallon almost 6 years ago
#10 - Corrected a mistake in labels parameter's explanation
Pull Request -
State: closed - Opened by miriammagallon almost 6 years ago
#9 - Completed parameter's information. Added checks to labels paramenters in plotX functions.
Pull Request -
State: closed - Opened by miriammagallon almost 6 years ago
#8 - Deleted quotes from all example files
Pull Request -
State: closed - Opened by miriammagallon almost 6 years ago
- 1 comment
#7 - solved documentation and example's problems from loadSNPDataFromVCF (man) and plotBAF (man and example)
Pull Request -
State: closed - Opened by miriammagallon almost 6 years ago
#6 - Manual modifications. "number of character" by "number or character"
Pull Request -
State: closed - Opened by miriammagallon almost 6 years ago
#5 - Corrected some mistakes in the documentation of the functions
Pull Request -
State: closed - Opened by miriammagallon almost 6 years ago
#4 - Last changes in loadSNPData and loadCopyNumberCalls funtions as well as in utils.
Pull Request -
State: closed - Opened by miriammagallon almost 6 years ago
- 1 comment
Labels: enhancement
#3 - improve loadSNPdata to use the external getColumn functions
Pull Request -
State: closed - Opened by miriammagallon almost 6 years ago
Labels: enhancement
#2 - Dependency TabixFile not available
Issue -
State: closed - Opened by lima1 about 6 years ago
- 3 comments
#1 - Make it work with summarized experiments
Issue -
State: closed - Opened by bernatgel about 6 years ago
- 1 comment