MDU-PHL/ngmaster issues and pull requests

#42 - printseq not working

Issue - State: open - Opened by SandersonHaley about 1 year ago

#41 - NG-STAR ST not assigned

Issue - State: open - Opened by SandersonHaley over 1 year ago

#40 - installed via conda but it says it is version ngmaster 0.5.8

Issue - State: open - Opened by waalkes over 1 year ago

#39 - ngmaster fails when mincov or minid flags are used

Issue - State: open - Opened by kapsakcj almost 2 years ago

#38 - Updating NGSTAR Database Failure - ('Connection aborted.', ConnectionResetError(104, 'Connection reset by peer'))

Issue - State: open - Opened by maurkarr almost 2 years ago - 1 comment

#37 - No NG-STAR when >1 23S alleles are found

Issue - State: open - Opened by stroehleina almost 2 years ago
Labels: enhancement

#36 - Bump certifi from 2020.4.5.1 to 2022.12.7

Pull Request - State: open - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#35 - Major update

Pull Request - State: closed - Opened by stroehleina about 2 years ago

#34 - www.ng-mast.net is down

Issue - State: open - Opened by mschmerer almost 3 years ago

#33 - Bump urllib3 from 1.25.9 to 1.26.5

Pull Request - State: open - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#32 - Errors when running make command in isPcrSrc directory

Issue - State: closed - Opened by jayminz almost 5 years ago - 3 comments
Labels: help wanted

#31 - Add to bioconda

Issue - State: open - Opened by tseemann about 5 years ago - 1 comment

#30 - Switch to semantic X.Y.Z don't have -beta

Issue - State: closed - Opened by tseemann about 5 years ago - 1 comment
Labels: bug

#29 - updatedb unable to update database

Issue - State: closed - Opened by DrReemaSingh over 5 years ago - 1 comment
Labels: bug

#28 - Database update Error

Issue - State: closed - Opened by DrReemaSingh over 5 years ago - 6 comments
Labels: bug

#27 - Finding discrepancies between ngmaster and pubmlst allele calls

Issue - State: open - Opened by slvrshot almost 6 years ago - 13 comments
Labels: bug

#26 - Move README from Markdown to RST to work on pypi

Issue - State: closed - Opened by andersgs about 6 years ago

#25 - extra_require error

Issue - State: closed - Opened by andersgs about 6 years ago - 1 comment

#24 - load_entry_point

Issue - State: closed - Opened by DrReemaSingh over 6 years ago - 2 comments

#23 - Upgrade to python3

Pull Request - State: closed - Opened by schultzm almost 7 years ago

#22 - multiple alleles missed if one is novel

Issue - State: closed - Opened by simonrharris almost 8 years ago - 3 comments
Labels: bug

#21 - Difficulties installing isPcr from source on MacOS

Issue - State: closed - Opened by kwongj over 8 years ago - 1 comment

#20 - Updated function to handle update_db

Pull Request - State: closed - Opened by andersgs over 8 years ago

#19 - --updatedb creates additional blank temp files

Issue - State: closed - Opened by kwongj over 8 years ago - 1 comment
Labels: bug

#18 - Update README

Pull Request - State: closed - Opened by andersgs over 8 years ago

#17 - command_line.py is empty

Issue - State: closed - Opened by tseemann over 8 years ago - 1 comment
Labels: question

#16 - Need instructions on how to install git version

Issue - State: closed - Opened by tseemann over 8 years ago - 2 comments
Labels: enhancement

#15 - pip version doesn't know where the databases are

Issue - State: closed - Opened by tseemann over 8 years ago - 2 comments
Labels: bug

#14 - Pip install

Pull Request - State: closed - Opened by andersgs over 8 years ago
Labels: enhancement

#13 - updating database - add try/except

Issue - State: closed - Opened by kwongj over 8 years ago - 1 comment
Labels: enhancement

#12 - report multiple alleles better for parsing

Issue - State: closed - Opened by kwongj over 8 years ago - 1 comment
Labels: enhancement