Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / MDU-PHL/meningotype issues and pull requests
#44 - Provide an option to not print the header on the output
Issue -
State: open - Opened by pvanheus over 1 year ago
#43 - If an analysis ends in ERROR the return code of the tool should not be 0
Issue -
State: open - Opened by pvanheus over 1 year ago
#42 - DB should have "version number" and this version number should be reported in output
Issue -
State: open - Opened by pvanheus over 1 year ago
#41 - Updating DB outside of tool-installation directory should be possible
Issue -
State: open - Opened by pvanheus over 1 year ago
- 2 comments
#40 - Meningotype does not fail if any of the subprocesses it calls (isPcr, mlst) fail
Issue -
State: closed - Opened by stroehleina over 1 year ago
- 1 comment
Labels: bug
#39 - Update meningotype.py
Pull Request -
State: open - Opened by boasvdp about 2 years ago
#38 - Mendevar
Pull Request -
State: open - Opened by stroehleina about 2 years ago
- 3 comments
Labels: enhancement
#37 - Meningotype seems to have trouble identifying FetA F5-1
Issue -
State: open - Opened by boasvdp about 2 years ago
- 1 comment
#36 - Need to add tests for updating DB
Issue -
State: open - Opened by andersgs about 3 years ago
#35 - meningotype can not work
Issue -
State: closed - Opened by chen1i6c04 about 3 years ago
- 5 comments
Labels: help wanted
#34 - Kristy
Pull Request -
State: closed - Opened by kristyhoran almost 5 years ago
#33 - Updates to Py3 upgrade
Pull Request -
State: closed - Opened by schultzm about 5 years ago
- 2 comments
Labels: help wanted
#32 - Adding other serotype E, cnl etc
Issue -
State: closed - Opened by lexleong over 5 years ago
- 2 comments
Labels: enhancement, help wanted
#31 - Updated installation instructions
Pull Request -
State: closed - Opened by embatty about 6 years ago
#30 - Installing dependencies: homebrew/science is deprecated
Issue -
State: closed - Opened by embatty about 6 years ago
- 1 comment
#29 - Fixing incorrect exit code upon successful updating of the database.
Pull Request -
State: closed - Opened by andersgs over 6 years ago
#28 - Migrate to Python 3
Issue -
State: closed - Opened by tseemann over 6 years ago
- 2 comments
Labels: enhancement
#27 - Needs some documentation on interpretation of output
Issue -
State: open - Opened by andersgs about 7 years ago
- 2 comments
Labels: enhancement, asks_too_many_questions
#26 - Not compatible with latest version of MLST
Issue -
State: closed - Opened by andersgs about 7 years ago
Labels: bug
#25 - seroWY doesn't handle gaps
Issue -
State: open - Opened by kwongj over 7 years ago
Labels: bug
#24 - Add capacity to perform cgMLST
Issue -
State: open - Opened by kwongj over 7 years ago
- 2 comments
Labels: enhancement
#23 - Add option for using multiple CPUs for BLAST
Issue -
State: closed - Opened by kwongj over 7 years ago
- 1 comment
Labels: enhancement
#22 - Add --checkdeps and check within application too?
Issue -
State: closed - Opened by tseemann over 7 years ago
Labels: bug
#21 - Refactor code
Issue -
State: open - Opened by tseemann over 7 years ago
Labels: enhancement
#20 - Consider combining all .fas files and do a single blast
Issue -
State: open - Opened by tseemann over 7 years ago
Labels: enhancement, question
#19 - Add to bioconda
Issue -
State: closed - Opened by tseemann over 7 years ago
- 1 comment
Labels: enhancement
#18 - Add to homebrew/science
Issue -
State: closed - Opened by tseemann over 7 years ago
- 1 comment
Labels: enhancement
#17 - Start preparing for release on PyPi
Issue -
State: closed - Opened by tseemann over 7 years ago
- 1 comment
Labels: enhancement
#16 - Does --db need to be BLAST formatted?
Issue -
State: closed - Opened by tseemann over 7 years ago
- 1 comment
Labels: question
#15 - Make --version more standards compliant
Issue -
State: closed - Opened by tseemann over 7 years ago
- 1 comment
Labels: bug
#14 - Barf nicer on non-existent filename
Issue -
State: closed - Opened by tseemann over 7 years ago
Labels: bug
#13 - --printseq should NOT write to folder in current directory
Issue -
State: closed - Opened by tseemann over 7 years ago
Labels: bug, enhancement
#12 - Missing exact hits to PorA
Issue -
State: closed - Opened by tseemann over 7 years ago
- 5 comments
Labels: bug
#11 - Update Markdown docs to strict format
Issue -
State: closed - Opened by tseemann over 7 years ago
Labels: bug
#10 - BLAST databases don't get updated with --updatedb
Issue -
State: closed - Opened by kwongj over 7 years ago
Labels: bug
#9 - error in menwy.py with non-P/G/S amino acid in EX7E motif
Issue -
State: closed - Opened by kwongj over 7 years ago
- 1 comment
#8 - Check ctrA PCR
Issue -
State: closed - Opened by kwongj over 7 years ago
- 1 comment
Labels: enhancement
#6 - User can't run --update if installed globally
Issue -
State: closed - Opened by tseemann over 7 years ago
- 1 comment
Labels: bug
#5 - incorrectly calls truncated alleles
Issue -
State: closed - Opened by kwongj over 7 years ago
- 1 comment
Labels: bug
#4 - Handle new Y+W serotype
Issue -
State: closed - Opened by tseemann about 8 years ago
- 1 comment
Labels: enhancement
#3 - Pip install fix2
Pull Request -
State: closed - Opened by andersgs about 8 years ago
#2 - Pip install fix
Pull Request -
State: closed - Opened by andersgs about 8 years ago
#1 - Pip install
Pull Request -
State: closed - Opened by andersgs about 8 years ago
- 1 comment