GenomicsStandardsConsortium/mixs issues and pull requests

#236 - Evaluate CEDAR template datamodel for representing MIxS templates

Issue - State: open - Opened by cmungall over 4 years ago - 7 comments

#235 - Provide standardize way to map MIxS columns to ontology descriptors

Issue - State: open - Opened by cmungall over 4 years ago - 9 comments
Labels: Technical, w3id

#233 - Decide on format for MIxS URIs - namespace

Issue - State: closed - Opened by ramonawalls over 4 years ago - 27 comments
Labels: Technical, w3id

#212 - broaden use of [MIXS:0001121]

Issue - State: open - Opened by only1chunts about 3 years ago - 4 comments
Labels: 1-TermUpdate, 3-CIG, MIxSv7.0

#211 - Add below ground heating for soil & plant packages

Issue - State: open - Opened by mslarae13 about 3 years ago
Labels: 2-NewTerm, 3-CIG, MIxSv7.0

#204 - add column to indicate if a term can have multiple values

Issue - State: open - Opened by wdduncan about 3 years ago - 6 comments
Labels: bug

#203 - investigation_type multivalued? and possibility of additional legal values ?

Issue - State: closed - Opened by turbomam about 3 years ago - 6 comments
Labels: TermUpdate, NMDC

#195 - "Symbiont" - ambiguous usage in the Symbiont-associated package

Issue - State: open - Opened by pbuttigieg over 3 years ago - 14 comments
Labels: help wanted, CIG review

#184 - host of the symbiont taxid [MIXS:0001306]- for Symbiont-associated (SA) package

Issue - State: open - Opened by only1chunts over 3 years ago - 4 comments
Labels: 3-CIG, MIxSv7.0

#168 - Update MIXS:0000028 - observed biotic relationship

Issue - State: open - Opened by raissameyer over 3 years ago - 9 comments
Labels: 1-TermUpdate, 3-CIG, MIxSv7.0

#166 - measurement value ranges

Issue - State: open - Opened by wdduncan over 3 years ago - 20 comments
Labels: MIxSv7.0

#156 - samp_collec_device renamed to sample_collec_device?

Issue - State: open - Opened by thomasstjerne over 3 years ago - 4 comments
Labels: 1-TermUpdate, 3-CIG

#154 - Proposal: use UCUM for units across all of MIxS

Issue - State: open - Opened by cmungall over 3 years ago - 3 comments
Labels: MIxSv7.0

#153 - Possible update to definition of "number of standard tRNAs extracted" [MIXS:0000067]

Issue - State: open - Opened by only1chunts over 3 years ago
Labels: 1-TermUpdate, 3-CIG, MIxSv7.0

#152 - possible name change for taxonomic classification [MIXS:0000064]

Issue - State: open - Opened by only1chunts over 3 years ago
Labels: 1-TermUpdate, 3-CIG, MIxSv7.0

#151 - Possibel update to "reference database(s)" [MIXS:0000062]

Issue - State: open - Opened by only1chunts over 3 years ago
Labels: 1-TermUpdate, 3-CIG, MIxSv7.0

#150 - Possible update to definition of " feature prediction" [MIXS:0000061]

Issue - State: open - Opened by only1chunts over 3 years ago
Labels: 1-TermUpdate, 3-CIG, MIxSv7.0

#149 - (possible) Update to "source material identifiers" [MIXS:0000026]

Issue - State: open - Opened by only1chunts over 3 years ago
Labels: 1-TermUpdate, 3-CIG, MIxSv7.0

#148 - Update to annotation [MIXS:0000059]?

Issue - State: open - Opened by only1chunts over 3 years ago
Labels: 1-TermUpdate, 3-CIG, MIxSv7.0

#147 - Update definition of assembly quality [MIXS:0000056]

Issue - State: open - Opened by only1chunts over 3 years ago - 2 comments
Labels: 1-TermUpdate, 3-CIG, MIxSv7.0

#145 - update "isolation and growth condition"

Issue - State: open - Opened by only1chunts over 3 years ago
Labels: 1-TermUpdate, 3-CIG, MIxSv7.0

#144 - update definition of "relationship to oxygen"

Issue - State: open - Opened by only1chunts over 3 years ago
Labels: 1-TermUpdate, 3-CIG, MIxSv7.0

#143 - generalize the definition of "encoded traits" term

Issue - State: open - Opened by only1chunts over 3 years ago
Labels: 1-TermUpdate, 3-CIG, MIxSv7.0

#142 - update term name "estimated size" to "genome estimated size"

Issue - State: open - Opened by only1chunts over 3 years ago
Labels: 1-TermUpdate, 3-CIG, MIxSv7.0

#139 - Updating 'Section' across checklists and packages

Issue - State: open - Opened by lschriml over 3 years ago - 3 comments
Labels: 3-CIG, MIxSv7.0

#138 - Identifiers.org Resolution Service

Issue - State: closed - Opened by jjkoehorst over 3 years ago - 3 comments
Labels: Technical, w3id

#137 - Create a release folder

Issue - State: closed - Opened by ramonawalls over 3 years ago - 1 comment
Labels: Technical

#136 - Storage Conditions

Issue - State: open - Opened by mslarae13 over 3 years ago
Labels: 1-TermUpdate, 3-CIG

#135 - water_content & water_content_meth

Issue - State: open - Opened by mslarae13 over 3 years ago
Labels: 1-TermUpdate, 3-CIG

#134 - Add pH method to sediment

Issue - State: open - Opened by mslarae13 over 3 years ago - 1 comment
Labels: 1-TermUpdate, 3-CIG

#133 - Add plant_assoc terms to soil & sediment packages

Issue - State: open - Opened by mslarae13 over 3 years ago
Labels: 1-TermUpdate, 3-CIG

#132 - Update enum lists for propagation

Issue - State: open - Opened by ramonawalls over 3 years ago
Labels: 1-TermUpdate, 3-CIG, MIxSv7.0

#130 - look at definition and use of "sample transport conditions" term

Issue - State: open - Opened by only1chunts over 3 years ago
Labels: 1-TermUpdate, 3-CIG, MIxSv7.0

#129 - update definition and expected values of term lithology

Issue - State: open - Opened by only1chunts over 3 years ago
Labels: 1-TermUpdate, 3-CIG, MIxSv7.0

#128 - expand definition of host_taxid term?

Issue - State: open - Opened by only1chunts over 3 years ago - 3 comments
Labels: 1-TermUpdate, 3-CIG, MIxSv7.0

#127 - update term bac_resp definition and maybe name

Issue - State: open - Opened by only1chunts over 3 years ago
Labels: 1-TermUpdate, 3-CIG, MIxSv7.0

#126 - update to bac_prod term definition and maybe name

Issue - State: open - Opened by only1chunts over 3 years ago
Labels: 1-TermUpdate, 3-CIG, MIxSv7.0

#124 - IHMC medication code -- keep or replace

Issue - State: open - Opened by lschriml over 3 years ago - 2 comments
Labels: 1-TermUpdate, 3-CIG, MIxSv7.0

#123 - create a GSC application ontology

Issue - State: open - Opened by only1chunts over 3 years ago - 2 comments
Labels: MIxSv8.0

#122 - Duplicate term between Misc: and Soil package?

Issue - State: open - Opened by StantonMartin over 3 years ago
Labels: 1-TermUpdate, 4-TWG

#120 - Release process

Issue - State: open - Opened by pbuttigieg over 3 years ago - 2 comments
Labels: enhancement, MIxSv7.0, documentation-internal

#113 - Generic fields to allow specification of property P of medium M

Issue - State: open - Opened by pbuttigieg over 3 years ago
Labels: 1-TermUpdate, 4-TWG

#105 - Term request: Zinc in soil package

Issue - State: open - Opened by StantonMartin over 3 years ago - 2 comments
Labels: 2-NewTerm, 3-CIG

#103 - Term request: phosphorus in soil package

Issue - State: open - Opened by StantonMartin over 3 years ago - 1 comment
Labels: 2-NewTerm, 3-CIG

#93 - How to include units in MIxS terms

Issue - State: open - Opened by ramonawalls almost 4 years ago - 8 comments
Labels: 3-CIG, 4-TWG

#92 - names that begin with numbers

Issue - State: closed - Opened by wdduncan over 4 years ago - 9 comments
Labels: 4-TWG

#91 - Consensus on ontology term format

Issue - State: open - Opened by raissameyer almost 4 years ago - 2 comments
Labels: bug

#89 - Add information about the precision to lat_lon

Issue - State: open - Opened by wdduncan almost 4 years ago - 8 comments
Labels: 1-TermUpdate, 3-CIG

#83 - structured comment name too long tot_nitro_content_meth

Issue - State: closed - Opened by only1chunts about 4 years ago - 3 comments
Labels: 1-TermUpdate, MIxSv7.0

#82 - Update MIXS ReadMe, Documentation new Packages, Expected Values

Issue - State: open - Opened by lschriml about 4 years ago - 1 comment
Labels: 3-CIG, documentation-internal

#77 - What should be Core terms?

Issue - State: closed - Opened by only1chunts about 4 years ago - 4 comments
Labels: MIxSv7.0, Topic for Paper, website

#59 - Ethnicity

Issue - State: closed - Opened by only1chunts over 4 years ago - 14 comments
Labels: TermUpdate, CIG review, discuss in CIG

#58 - Defining MIxS ID space for MIxS v.6

Issue - State: open - Opened by lschriml over 4 years ago - 13 comments
Labels: in progress, w3id

#50 - term request: Soil N20 flux

Issue - State: open - Opened by wdduncan over 4 years ago - 2 comments
Labels: NewTerm, discuss in CIG

#49 - term request: Soil Nitrate

Issue - State: closed - Opened by wdduncan over 4 years ago - 2 comments
Labels: NewTerm, discuss in CIG

#35 - G10K and VGP terminology

Issue - State: open - Opened by only1chunts over 4 years ago - 2 comments
Labels: 3-CIG, outreach

#30 - Change github org name

Issue - State: open - Opened by ramonawalls about 5 years ago - 4 comments
Labels: discuss in CIG, Technical

#17 - Geo location usage guidance

Issue - State: open - Opened by only1chunts over 6 years ago - 4 comments
Labels: enhancement, 3-CIG, MIxSv7.0

#14 - Include units in the column header

Issue - State: closed - Opened by cuttlefishh almost 7 years ago - 12 comments
Labels: enhancement, env_extenstion, 3-CIG

#3 - add and configure Travis CI and ESLint

Pull Request - State: closed - Opened by folker about 7 years ago

GitHub / GenomicsStandardsConsortium/mixs issues and pull requests