COMBINE-lab/RapClust issues and pull requests

#21 - Update eqnet.py to work in Python3

Pull Request - State: open - Opened by IdoBar 6 months ago

#20 - How to create count matrix Rapclust with config.yaml?

Issue - State: open - Opened by mathavanpu almost 3 years ago

#19 - Question on how to use RapClust with Salmon

Issue - State: open - Opened by lychen83 almost 7 years ago

#18 - Select reduced transcriptome from clusters

Issue - State: open - Opened by mpaya about 7 years ago - 2 comments

#17 - lost contigs along the way ?

Issue - State: closed - Opened by TristanLefebure over 7 years ago - 2 comments

#16 - yeilds -> yields

Pull Request - State: closed - Opened by mdshw5 over 7 years ago - 1 comment

#15 - itertools

Issue - State: closed - Opened by TristanLefebure over 7 years ago - 2 comments

#14 - Salmon > RapClust pipeline compatibility

Issue - State: closed - Opened by Quarkins almost 8 years ago - 2 comments

#13 - TypeError: 'NoneType' object has no attribute 'getitem'

Issue - State: closed - Opened by pezhmansafdari about 8 years ago - 9 comments

#12 - Update README.md

Pull Request - State: closed - Opened by k3yavi over 8 years ago

#11 - Parsed json for auxDir

Pull Request - State: closed - Opened by k3yavi over 8 years ago - 1 comment

#10 - issue 9 possible resolution

Pull Request - State: closed - Opened by k3yavi over 8 years ago - 5 comments

#9 - support user-defined aux directory

Issue - State: closed - Opened by johnsolk over 8 years ago - 1 comment

#8 - RapClust with no params throws a stack trace

Issue - State: closed - Opened by tseemann over 8 years ago

#7 - index out of bounds error

Issue - State: closed - Opened by jesgomez over 8 years ago - 5 comments
Labels: question

#6 - Handle multiple (> 2) conditions in the likelihood ratio test

Issue - State: open - Opened by rob-p almost 9 years ago - 1 comment
Labels: enhancement

#5 - Add a Gitter chat badge to README.md

Pull Request - State: closed - Opened by gitter-badger almost 9 years ago

#4 - Greedy Heuristic for improving FN

Issue - State: open - Opened by k3yavi almost 9 years ago
Labels: enhancement

#3 - Strand specific protocol for Pipeline