Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / AndersenLab/VCF-kit issues and pull requests
#48 - Can't install
Issue -
State: open - Opened by boutrys about 2 months ago
#47 - vcf2tsv cna't print header
Issue -
State: open - Opened by huipan1973 3 months ago
#46 - problem with primer3 in both conda and docker
Issue -
State: open - Opened by shanmugavadivelps 4 months ago
#45 - Running Docker version: "ModuleNotFoundError: No module named 'pomegranate'"
Issue -
State: open - Opened by ariellerjohnson over 1 year ago
#44 - Cannot find thermo path '/primer3_config/
Issue -
State: open - Opened by thomvesiri over 1 year ago
#43 - Muscle 5.1 no longer has "-maketree" command, breaking vk phylo
Issue -
State: open - Opened by William-Gibson-ig almost 2 years ago
#42 - Memory Issues when running tajima module
Issue -
State: open - Opened by mwersebe about 2 years ago
#41 - Custom genome assembly?
Issue -
State: open - Opened by BayLab over 2 years ago
#40 - TypeError: '<' not supported between instances of 'int' and 'NoneType'
Issue -
State: open - Opened by selasphoruskershaw about 3 years ago
#39 - error while using docker image (andersenlab/vcf-kit:20200822175018b7b60d: TypeError: a bytes-like object is required, not 'str'
Issue -
State: open - Opened by laura-bankers about 3 years ago
- 1 comment
#38 - Warning --sample option not given
Issue -
State: open - Opened by VivekTodur about 3 years ago
#37 - KeyError: b'AC' in Tajima'sD calculation
Issue -
State: closed - Opened by mariesaitou about 3 years ago
- 1 comment
#36 - fix biopython version
Pull Request -
State: closed - Opened by samwachspress about 3 years ago
#35 - vk primer bio.alphabet error
Issue -
State: closed - Opened by kimh11 over 3 years ago
- 3 comments
#34 - cannot get this to work
Issue -
State: open - Opened by herber4 over 3 years ago
- 5 comments
#33 - got an KeyError with the tajima.py
Issue -
State: closed - Opened by JieGao-XTBG over 3 years ago
- 1 comment
#32 - ImportError: No module named vcfkit
Issue -
State: closed - Opened by vappiah over 3 years ago
- 4 comments
#31 - error loading tabix index for building a region specific tree
Issue -
State: open - Opened by ccastane9 over 3 years ago
- 2 comments
#30 - TypeError Python 3
Issue -
State: open - Opened by sofsta almost 4 years ago
- 2 comments
#29 - Make VCF-kit work with Python3
Pull Request -
State: closed - Opened by danielecook almost 4 years ago
#28 - calculate Tajima'D on haploid
Issue -
State: open - Opened by AlexWanghaoming almost 4 years ago
- 2 comments
#27 - vcf2tsv error
Issue -
State: closed - Opened by boboppie almost 4 years ago
- 1 comment
#26 - something wrong installing with anaconda
Issue -
State: closed - Opened by Haoyuan17 about 4 years ago
- 9 comments
#25 - Conda install error
Issue -
State: open - Opened by danrlu about 4 years ago
#24 - Is it possible to plot the Tajima's D result?
Issue -
State: closed - Opened by smallfishcui over 4 years ago
- 1 comment
#23 - ImportError: cannot import name 'lev' from 'utils' (/Applications/miniconda3/lib/python3.7/site-packages/utils/__init__.py)
Issue -
State: closed - Opened by joswald over 4 years ago
- 4 comments
#22 - Exception due to misuse of numpy options
Issue -
State: open - Opened by aozalevsky over 5 years ago
#21 - The 'VCF-kit==0.1.6' distribution was not found and is required by the application
Issue -
State: open - Opened by DallasThomas over 5 years ago
- 2 comments
#20 - issue with primer3
Issue -
State: closed - Opened by amykwebster over 5 years ago
- 4 comments
#19 - phylogenetic tree
Issue -
State: closed - Opened by vinay104 about 6 years ago
- 2 comments
#18 - nothing to be generated
Issue -
State: closed - Opened by DengHAU about 6 years ago
- 1 comment
#17 - setup error
Issue -
State: closed - Opened by oxidizer2001 about 6 years ago
- 1 comment
#16 - vk error on RHEL7
Issue -
State: closed - Opened by beechwood13 over 6 years ago
- 11 comments
#15 - issues installing vcf-kit on Mac
Issue -
State: closed - Opened by seraphim711 over 6 years ago
- 1 comment
#14 - No reference strain in output alignment file?
Issue -
State: closed - Opened by nghait over 6 years ago
- 3 comments
#13 - problems with PyFPE
Issue -
State: open - Opened by lroma84 over 6 years ago
- 2 comments
#12 - VK does not work with plink outputed VCF because the AC is empty
Issue -
State: closed - Opened by andreyurch over 6 years ago
- 2 comments
#11 - vk doesnot work on mac
Issue -
State: closed - Opened by andreyurch over 6 years ago
- 5 comments
#10 - vk setup errors
Issue -
State: closed - Opened by mwhj over 6 years ago
- 7 comments
#9 - vk calc syntax error
Issue -
State: closed - Opened by asherichia almost 7 years ago
- 1 comment
#8 - Problem install VCF-kit
Issue -
State: closed - Opened by CristianRiccio about 7 years ago
- 1 comment
#7 - vk setup Error
Issue -
State: closed - Opened by moko-moko about 7 years ago
- 1 comment
#6 - pip install fail
Issue -
State: closed - Opened by hoyonh over 7 years ago
- 36 comments
#5 - No module named cyvcf2
Issue -
State: closed - Opened by nuin over 7 years ago
- 1 comment
#4 - vk phylo bug
Issue -
State: closed - Opened by pthiru over 7 years ago
- 11 comments
#3 - Error parsing GATK produced VCFs
Issue -
State: closed - Opened by nuin over 7 years ago
- 6 comments
#2 - Great
Issue -
State: closed - Opened by danielecook over 7 years ago
#1 - Can I pip install this?
Issue -
State: closed - Opened by tseemann almost 8 years ago
- 2 comments