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gitlab.com / materials-modeling/icet issues and pull requests

Labelled with: Code Structure

#573 - Review handling of tolerances on the C++ side

Issue - State: opened - Opened by rmagnus almost 4 years ago - 4 comments
Labels: Code Structure

#562 - Review functions for calculating cluster radii, distances etc.

Issue - State: opened - Opened by rmagnus about 4 years ago
Labels: Code Structure

#556 - Improve structure of MatrixOfEquivalentPositions

Issue - State: opened - Opened by rmagnus about 4 years ago
Labels: Code Quality, Code Structure, Documentation

#555 - Review usage of the Cluster class

Issue - State: closed - Opened by rmagnus about 4 years ago - 1 comment
Labels: Code Quality, Code Structure

#553 - Refactor SRO and cluster count observer

Issue - State: opened - Opened by rmagnus about 4 years ago
Labels: Code Quality, Code Structure, mchammer

#552 - Always permute clusters upon initialization of an orbit/orbit list

Issue - State: closed - Opened by rmagnus about 4 years ago
Labels: Code Quality, Code Structure, Doing

#541 - Transition to trainstation

Issue - State: closed - Opened by erhart over 4 years ago - 1 comment
Labels: Code Structure

#536 - Let Orbit handle multicomponent vectors and related quantities

Pull Request - State: merged - Opened by rmagnus about 4 years ago - 77 comments
Labels: Code Quality, Code Structure

#535 - Simplified cluster expansion calculator initialization

Pull Request - State: merged - Opened by rmagnus about 4 years ago - 30 comments
Labels: Code Quality, Code Structure

#533 - Let Structure work with scaled positions instead of Cartesian coordinates

Pull Request - State: merged - Opened by rmagnus about 4 years ago - 7 comments
Labels: Code Structure, Performance

#529 - Better usage of the cluster class

Pull Request - State: merged - Opened by rmagnus about 4 years ago - 92 comments
Labels: Code Quality, Code Structure

#523 - Better handling of permutations of clusters in orbits

Pull Request - State: merged - Opened by rmagnus about 4 years ago - 56 comments
Labels: Code Quality, Code Structure

#518 - Move MatrixOfEquivalentPositions to Python side

Pull Request - State: merged - Opened by rmagnus about 4 years ago - 37 comments
Labels: Code Structure

#515 - Avoid copying local orbit list every time a cluster vector is calculated

Pull Request - State: merged - Opened by rmagnus about 4 years ago - 26 comments
Labels: Code Structure, Performance

#513 - Explore multithreading with OpenMP

Pull Request - State: closed - Opened by rmagnus about 4 years ago - 18 comments
Labels: Code Structure, Performance

#498 - Towards converting C++ into Python: ManyBodyNeighborList

Issue - State: opened - Opened by piotr.rozyczko over 5 years ago - 7 comments
Labels: Code Structure, icet

#498 - Transition to trainstation

Pull Request - State: merged - Opened by erikfransson over 4 years ago - 22 comments
Labels: Code Structure

#493 - Resolve distinction between parameters and ECIs

Issue - State: closed - Opened by erhart over 5 years ago - 17 comments
Labels: Code Structure, Doing

#461 - Handle property change calculation inside calculator

Pull Request - State: merged - Opened by rmagnus over 5 years ago - 5 comments
Labels: Code Structure, mchammer

#452 - Resolve "Distinction between parameters and ECIs"

Pull Request - State: merged - Opened by erikfransson over 5 years ago - 19 comments
Labels: Code Structure

#448 - Circular calls between get_data and get_trajectory

Issue - State: closed - Opened by erhart almost 6 years ago - 12 comments
Labels: Code Quality, Code Structure, Interface

#446 - Update `GroundStateFinder` to use new python-mip features

Issue - State: closed - Opened by pmla about 6 years ago - 1 comment
Labels: Code Quality, Code Structure, Suggestion, icet

#439 - Separate GroundStateFinder functions into two modules

Issue - State: closed - Opened by yoobro about 6 years ago - 16 comments
Labels: Code Quality, Code Structure, To Do, icet

#438 - Make icet Structure class and remove ASE dependency internally

Issue - State: closed - Opened by erikfransson about 6 years ago - 2 comments
Labels: Code Quality, Code Structure, To Do

#435 - Make WangLandauEnsemble child of TBE

Issue - State: closed - Opened by erhart about 6 years ago
Labels: Code Structure, mchammer

#367 - Add Thermodynamic Base Ensemble

Issue - State: closed - Opened by erikfransson over 6 years ago - 13 comments
Labels: Code Structure, Doing, mchammer

#366 - Add a DataContainer.add_ensemble_parameters function

Issue - State: closed - Opened by erikfransson over 6 years ago - 5 comments
Labels: Code Quality, Code Structure

#333 - Review tag parameter in SiteOccupancyFactor

Issue - State: closed - Opened by erhart almost 7 years ago - 9 comments
Labels: Code Structure, Interface, Review

#315 - Replace copies (and internal class members) with references

Issue - State: closed - Opened by erhart almost 7 years ago - 4 comments
Labels: Code Quality, Code Structure, To Do

#312 - EXPLORE: consolidate orbitlist on the python and c++ side

Issue - State: closed - Opened by angqvist almost 7 years ago - 1 comment
Labels: Code Quality, Code Structure

#310 - Resolve "Add Thermodynamic Base Ensemble"

Pull Request - State: merged - Opened by angqvist over 6 years ago - 55 comments
Labels: Code Structure, Doing, mchammer

#295 - DataContainer should include the ensemble macrostate variables as inmutable parameters

Issue - State: closed - Opened by williamz almost 7 years ago - 3 comments
Labels: Code Structure, Review, mchammer

#292 - Remove core_py and associated tests from master

Issue - State: closed - Opened by throd about 7 years ago - 1 comment
Labels: Code Quality, Code Structure, Review

#282 - Append data as list of dict in DataContainer

Issue - State: closed - Opened by williamz about 7 years ago - 12 comments
Labels: Code Structure, Review

#280 - Resolve "Default observer interval should be len(atoms)"

Pull Request - State: merged - Opened by erikfransson over 6 years ago - 1 comment
Labels: Code Structure, Interface

#263 - Move examples into tutorial folder

Issue - State: closed - Opened by erhart about 7 years ago
Labels: Code Structure, Documentation, To Do

#257 - ENH: Added last_structure property to base_ensemble

Pull Request - State: closed - Opened by williamz almost 7 years ago - 5 comments
Labels: Code Structure, Doing, Feature

#256 - Save last state of MC run even if there is no data container filename specified

Issue - State: closed - Opened by rmagnus about 7 years ago - 6 comments
Labels: Code Structure, Feature, Review, mchammer

#253 - MAIN: Renamed the site occupancy factor observer and fixed the doc string.

Pull Request - State: merged - Opened by yoobro almost 7 years ago
Labels: Code Structure, Interface, Review

#247 - Redesign of the parameters in Ensembles

Issue - State: closed - Opened by erikfransson about 7 years ago - 10 comments
Labels: Code Structure, Feature, Review

#245 - Clean up observables in DataContainer

Issue - State: closed - Opened by erhart about 7 years ago
Labels: Code Structure, Review

#241 - Resolve "Save last state of MC run even if there is no data container filename specified"

Pull Request - State: merged - Opened by williamz almost 7 years ago - 15 comments
Labels: Code Structure, Doing, Feature, mchammer

#236 - Resolve "DataContainer should include the ensemble macrostate variables as inmutable parameters"

Pull Request - State: merged - Opened by williamz almost 7 years ago - 38 comments
Labels: Code Structure, Doing, mchammer

#235 - Moved examples to tutorial/advanced

Pull Request - State: merged - Opened by erhart almost 7 years ago
Labels: Code Structure, Documentation

#226 - MAINT: removed core_py (including tests and benchmarks)

Pull Request - State: merged - Opened by erhart about 7 years ago - 1 comment
Labels: Code Quality, Code Structure

#221 - Undo f-strings in mchammer

Issue - State: closed - Opened by erikfransson over 7 years ago - 1 comment
Labels: Code Structure

#213 - Resolve "Refactor get_data and get_average methods in DataContainer"

Pull Request - State: merged - Opened by erikfransson about 7 years ago - 14 comments
Labels: Code Structure, Doing, Interface

#193 - TST: Wrap database set up for testing in a function to fix flake8 error when…

Pull Request - State: merged - Opened by williamz about 7 years ago - 1 comment
Labels: Code Structure, Review, Tests

#191 - Rename PermutationMap to PermutationMatrix in C++

Issue - State: closed - Opened by williamz over 7 years ago - 8 comments
Labels: Code Quality, Code Structure

#185 - Remove atoms from base calculator

Issue - State: closed - Opened by angqvist over 7 years ago - 7 comments
Labels: Code Structure, Review

#182 - Resolve "Minimize usage of Structure class in ClusterCounts"

Pull Request - State: merged - Opened by rmagnus about 7 years ago - 33 comments
Labels: Code Quality, Code Structure, Documentation, Interface, Tests

#167 - Functionality for calculating energy changes

Issue - State: closed - Opened by erhart over 7 years ago - 7 comments
Labels: Code Structure, Feature, Performance, Review

#164 - Implement BaseObserver

Issue - State: closed - Opened by erhart over 7 years ago
Labels: Code Structure, Interface, Review

#158 - Implement basic DataContainer

Issue - State: closed - Opened by erhart over 7 years ago
Labels: Code Structure, Feature, Interface

#155 - Return ASE Atoms from ClusterSpace.get_primitive_structure()

Issue - State: closed - Opened by rmagnus over 7 years ago - 1 comment
Labels: Code Quality, Code Structure, Interface, Review

#154 - Let StructureContainer figure out mixing energy internally.

Issue - State: closed - Opened by angqvist over 7 years ago - 6 comments
Labels: Code Quality, Code Structure, Documentation, Feature

#144 - Resolve "Refactor get_data function of DataContainer"

Pull Request - State: merged - Opened by williamz over 7 years ago - 5 comments
Labels: Code Quality, Code Structure

#124 - Resolve "unit test icet/tools/convex_hull.py"

Pull Request - State: merged - Opened by rmagnus over 7 years ago
Labels: Code Structure, Tests

#124 - Fix import database in script that runs test suites

Issue - State: closed - Opened by williamz almost 8 years ago - 3 comments
Labels: Code Structure, Review, Tests

#103 - Python interface to OrbitList

Issue - State: closed - Opened by angqvist almost 8 years ago - 1 comment
Labels: Code Quality, Code Structure

#91 - Reorganization of Python modules

Issue - State: closed - Opened by erhart almost 8 years ago - 3 comments
Labels: Code Structure

#89 - Resolve "Return ASE Atoms from ClusterSpace.get_primitive_structure()"

Pull Request - State: merged - Opened by rmagnus over 7 years ago - 4 comments
Labels: Code Quality, Code Structure, Interface

#87 - StructureContainer: Initialize _structure_list even if no atoms list is given to init

Pull Request - State: merged - Opened by rmagnus over 7 years ago
Labels: Code Quality, Code Structure, Feature, Review

#60 - Clean up C++ code

Issue - State: closed - Opened by erhart about 8 years ago - 10 comments
Labels: Code Quality, Code Structure, Documentation, To Do