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GitHub / zoj613/zarr-ml issues and pull requests

#90 - Use `camlzip` package to implement a `ZipStore`.

Pull Request - State: closed - Opened by zoj613 7 months ago - 1 comment
Labels: storage, refactoring, I/O

#89 - Improve correctness of metadata parsing.

Pull Request - State: closed - Opened by zoj613 8 months ago - 1 comment
Labels: enhancement, node, metadata, refactoring

#88 - Rename `Deferred` to `IO` to reflect that its an I/O monad.

Pull Request - State: closed - Opened by zoj613 8 months ago - 1 comment
Labels: storage, refactoring, I/O

#87 - Add monadic bind and map to `Types.Deferred` module

Pull Request - State: open - Opened by zoj613 8 months ago
Labels: refactoring, I/O

#86 - Refactor codecs module.

Pull Request - State: closed - Opened by zoj613 9 months ago - 1 comment
Labels: codecs, refactoring

#85 - Add Http server storage backend

Pull Request - State: open - Opened by zoj613 9 months ago
Labels: enhancement, storage

#84 - Move Deferred modules to Zarr_*.Storage modules.

Pull Request - State: closed - Opened by zoj613 10 months ago - 1 comment
Labels: documentation, refactoring

#83 - Add support for Amazon S3 bucket storage backend.

Pull Request - State: closed - Opened by zoj613 10 months ago - 1 comment
Labels: enhancement, storage

#81 - Streamline code generation of `MemoryStore/ZipStore`.

Pull Request - State: closed - Opened by zoj613 10 months ago - 1 comment
Labels: storage, refactoring

#80 - Refactor to improve readability and maintainability.

Pull Request - State: closed - Opened by zoj613 10 months ago - 1 comment
Labels: documentation, refactoring

#79 - Add `ZipStore` zarr storage backend.

Pull Request - State: closed - Opened by zoj613 10 months ago - 1 comment
Labels: enhancement, storage

#77 - Ensure coordinates in transposed array are permuted.

Pull Request - State: closed - Opened by zoj613 11 months ago - 1 comment
Labels: bug, codecs

#77 - Ensure coordinates in transposed array are permuted.

Pull Request - State: closed - Opened by zoj613 11 months ago - 1 comment
Labels: bug, codecs

#76 - Add support for Zstd `bytes->bytes` Codec.

Pull Request - State: closed - Opened by zoj613 11 months ago - 1 comment
Labels: enhancement, codecs, tests

#76 - Add support for Zstd `bytes->bytes` Codec.

Pull Request - State: closed - Opened by zoj613 11 months ago - 1 comment
Labels: enhancement, codecs, tests

#75 - Minor updates and corrections.

Pull Request - State: closed - Opened by zoj613 11 months ago - 1 comment
Labels: bug, documentation, refactoring, examples

#75 - Minor updates and corrections.

Pull Request - State: open - Opened by zoj613 11 months ago
Labels: documentation, refactoring, examples

#74 - Prefer namespacing instead of suffix/prefix naming.

Pull Request - State: closed - Opened by zoj613 12 months ago - 1 comment
Labels: metadata, storage, refactoring

#74 - Prefer namespacing instead of suffix/prefix naming.

Pull Request - State: closed - Opened by zoj613 12 months ago - 1 comment
Labels: metadata, storage, refactoring

#73 - Add example using a custom scheduler for concurrent I/O

Pull Request - State: closed - Opened by zoj613 12 months ago - 1 comment
Labels: documentation, storage, I/O

#73 - Add example using a custom scheduler for concurrent I/O

Pull Request - State: closed - Opened by zoj613 12 months ago - 1 comment
Labels: documentation, storage, I/O

#72 - Add `rename` functionality for stores.

Pull Request - State: closed - Opened by zoj613 12 months ago - 1 comment
Labels: enhancement, node, storage, I/O

#72 - Add `rename` functionality for stores.

Pull Request - State: closed - Opened by zoj613 12 months ago - 1 comment
Labels: enhancement, node, storage, I/O

#71 - Add `to_bigarray/of_bigarray` to Ndarray module.

Pull Request - State: closed - Opened by zoj613 12 months ago - 1 comment
Labels: enhancement, storage

#71 - Add `to_bigarray/of_bigarray` to Ndarray module.

Pull Request - State: closed - Opened by zoj613 12 months ago - 1 comment
Labels: enhancement, storage

#70 - Update installation instructions.

Pull Request - State: closed - Opened by zoj613 12 months ago
Labels: documentation

#70 - Update installation instructions.

Pull Request - State: closed - Opened by zoj613 12 months ago - 1 comment
Labels: documentation

#69 - Add Ndarray to encapsulate view of Zarr array.

Pull Request - State: closed - Opened by zoj613 12 months ago - 1 comment
Labels: enhancement, codecs, refactoring

#69 - Add Ndarray to encapsulate view of Zarr array.

Pull Request - State: closed - Opened by zoj613 12 months ago - 1 comment
Labels: enhancement, codecs, refactoring

#68 - tests: update dune file to only run on the correct package

Pull Request - State: closed - Opened by mseri 12 months ago

#68 - tests: update dune file to only run on the correct package

Pull Request - State: closed - Opened by mseri 12 months ago

#67 - Remove `StrSet` module from utils.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: node, storage, I/O

#67 - Remove `StrSet` module from utils.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: node, storage, I/O

#66 - Generalize `list` and `list_prefix` for FilesystemStore

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: storage, performance, refactoring, I/O

#66 - Generalize `list` and `list_prefix` for FilesystemStore

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: storage, performance, refactoring, I/O

#65 - Enforce correct sequencing of codecs in codec chain.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: codecs, tests

#65 - Enforce correct sequencing of codecs in codec chain.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: codecs, tests

#64 - Add support for `let*/let+` syntax language extension.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: refactoring

#64 - Add support for `let*/let+` syntax language extension.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: refactoring

#63 - Update lwt and Eio tests.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: tests

#63 - Update lwt and Eio tests.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: tests

#62 - Prepare for 0.1.0 release.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment

#62 - Prepare for 0.1.0 release.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment

#61 - Optimize eio-based filesystem store abstract functions.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: storage, performance

#61 - Optimize eio-based filesystem store abstract functions.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: storage, performance

#60 - Add an example implementing a custom ZipStore.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: documentation, storage

#60 - Add an example implementing a custom ZipStore.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: documentation, storage

#59 - Use _s instead _p family of functions for Lwt_list.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: storage, performance, I/O

#59 - Use _s instead _p family of functions for Lwt_list.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: storage, performance, I/O

#58 - Add support for `Eio`-backed asynchronous I/O.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: enhancement, storage, I/O

#58 - Add support for `Eio`-backed asynchronous I/O.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: enhancement, storage, I/O

#57 - Support `Eio` as a concurrency library alternative to `Lwt`.

Issue - State: closed - Opened by zoj613 about 1 year ago
Labels: enhancement, help wanted, I/O

#56 - Add an example for creating a custom store using the core library.

Issue - State: closed - Opened by zoj613 about 1 year ago
Labels: documentation, help wanted

#55 - Add `AmazonS3` and `Http` storage backends

Issue - State: open - Opened by zoj613 about 1 year ago
Labels: enhancement, help wanted, storage

#54 - Add support for parallel reads/writes.

Pull Request - State: open - Opened by zoj613 about 1 year ago

#54 - Add support for parallel reads/writes.

Pull Request - State: open - Opened by zoj613 about 1 year ago - 1 comment

#53 - Use an appropriately sized Lwt IO buffer for reads/writes.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: storage, performance

#53 - Use an appropriately sized Lwt IO buffer for reads/writes.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: storage, performance

#52 - Minimize `get_partial` and `set_partial` calls.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: storage, performance, refactoring

#52 - Minimize `get_partial` and `set_partial` calls.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: storage, performance, refactoring

#51 - Use `Lwt_unix.unlink` over preemptive call to `Sys.remove`.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: storage, tests

#51 - Use `Lwt_unix.unlink` over preemptive call to `Sys.remove`.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: storage, tests

#50 - Add support for concurrent I/O.

Pull Request - State: open - Opened by zoj613 about 1 year ago
Labels: storage, refactoring

#50 - Add support for concurrent I/O.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: storage, refactoring

#49 - Make `add_to_list` part of ArrayMap module.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: refactoring

#48 - Replace Hashtbl-based MemoryStore with Atomic persistant Map.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: enhancement, storage, refactoring

#48 - Replace Hashtbl-based MemoryStore with Atomic persistant Map.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: enhancement, storage, refactoring

#47 - Simplify folding over `ArrayMap`.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: storage, refactoring

#47 - Simplify folding over `ArrayMap`.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: storage, refactoring

#46 - Make sharded arrays written by other implementations readable.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: bug, codecs, refactoring

#46 - Make sharded arrays written by other implementations readable.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: bug, codecs, refactoring

#45 - Shard index maximum value is currently limited to 2^63 - 1

Issue - State: closed - Opened by zoj613 about 1 year ago
Labels: bug, codecs

#44 - Replace metadata optional argument with attrs.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: metadata, codecs, storage, refactoring

#44 - Replace metadata optional argument with attrs.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: metadata, codecs, storage, refactoring

#43 - Fix Char decoding when using Bytes codec.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: bug, codecs

#43 - Fix Char decoding when using Bytes codec.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: bug, codecs

#42 - Update documentation content.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: documentation

#42 - Update documentation content.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: documentation

#41 - Ensure transpose function works for any bigarray kind.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: bug, codecs

#41 - Ensure transpose function works for any bigarray kind.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: bug, codecs

#40 - Abstract away adding an element to a list binding of `ArrayMap`.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: storage, refactoring

#40 - Abstract away adding an element to a list binding of `ArrayMap`.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: storage, refactoring

#39 - Use more familiar names for endianness variants.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: storage, refactoring

#39 - Use more familiar names for endianness variants.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: storage, refactoring

#38 - Clean up exposed interface of metadata modules.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: metadata, refactoring

#37 - implement partial encode/decode for sharding codec.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: codecs, performance, refactoring

#37 - implement partial encode/decode for sharding codec.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: codecs, performance, refactoring

#36 - Improve memory usage when reading array from store.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: storage, refactoring

#35 - Format code in several modules.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: refactoring

#35 - Format code in several modules.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: refactoring

#34 - Remove superfluous Ndarray module alias

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: refactoring

#34 - Remove superfluous Ndarray module alias

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: refactoring

#33 - Apply small optimizations to select storage functions.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: storage, performance, refactoring

#33 - Apply small optimizations to select storage functions.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: storage, performance, refactoring

#32 - Cleanup codecs interface.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: codecs, refactoring

#32 - Cleanup codecs interface.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: codecs, refactoring

#31 - Ensure index_codec JSON field is parsed correctly.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: codecs, refactoring

#31 - Ensure index_codec JSON field is parsed correctly.

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: codecs, refactoring

#30 - enforce index codec invariant

Pull Request - State: open - Opened by zoj613 about 1 year ago
Labels: codecs

#30 - Enforce shard index codec chain invariant

Pull Request - State: closed - Opened by zoj613 about 1 year ago - 1 comment
Labels: enhancement, codecs