Ecosyste.ms: Issues

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GitHub / zarr-developers/zarr-python issues and pull requests

#2131 - [v3] New Mypy errors now on v3 branch

Issue - State: closed - Opened by jhamman about 1 month ago - 3 comments
Labels: help wanted, V3, types

#2130 - Tests fail with azure-storage-blob 2.22.0

Issue - State: open - Opened by dstansby about 1 month ago
Labels: bug, V2

#2129 - Bump the requirements group across 1 directory with 3 updates

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies, python

#2128 - [v3] h5py compat methods on Group

Pull Request - State: closed - Opened by jhamman about 1 month ago - 3 comments
Labels: V3

#2127 - chore: bump minimum numpy version to 1.24

Pull Request - State: closed - Opened by jhamman about 1 month ago

#2126 - Debug azure-storage-blob test failures

Pull Request - State: closed - Opened by dstansby about 1 month ago - 5 comments

#2124 - Run tests on numpy 1.23

Pull Request - State: closed - Opened by dstansby about 1 month ago

#2123 - fix: numpy 1.24 compat for Array.__array__

Pull Request - State: closed - Opened by jhamman about 1 month ago - 3 comments

#2122 - Bump the requirements group across 1 directory with 3 updates

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago - 4 comments
Labels: dependencies, python

#2121 - Bump the requirements group across 1 directory with 4 updates

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago - 3 comments
Labels: dependencies, python

#2120 - Bump the requirements group across 1 directory with 5 updates

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago - 6 comments
Labels: dependencies, python

#2119 - Flaky test / buggy handling of large datetimes

Issue - State: closed - Opened by TomAugspurger about 1 month ago
Labels: bug

#2118 - Feature/recursive members

Pull Request - State: closed - Opened by TomAugspurger about 1 month ago - 10 comments

#2117 - Fixed MemoryStore.list_dir

Pull Request - State: closed - Opened by TomAugspurger about 1 month ago - 1 comment

#2116 - MemoryStore.list_dir incorrectly includes non-immediate children

Issue - State: closed - Opened by TomAugspurger about 1 month ago
Labels: bug

#2115 - Start applying ruff rules to notebooks (ruff 0.6+)

Pull Request - State: open - Opened by DimitriPapadopoulos about 1 month ago - 2 comments
Labels: V3

#2114 - Bump test version of numcodecs

Pull Request - State: closed - Opened by dstansby about 1 month ago - 2 comments

#2113 - Zarr-v3 Consolidated Metadata

Pull Request - State: open - Opened by TomAugspurger about 1 month ago - 7 comments
Labels: V3

#2112 - Group.create_array signature doesn't match between sync and async

Issue - State: closed - Opened by TomAugspurger about 1 month ago - 2 comments
Labels: bug

#2111 - [v3] updating attributes breaks zarr.json metadata (e.g. dim sep)

Issue - State: open - Opened by joshmoore about 1 month ago - 2 comments
Labels: bug

#2110 - Enforce ruff/flake8-type-checking rules (TCH)

Pull Request - State: closed - Opened by DimitriPapadopoulos about 1 month ago - 1 comment

#2109 - Bump the requirements group across 1 directory with 6 updates

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago - 2 comments
Labels: dependencies, python

#2108 - [v3] Implement store methods for erase and rename operations

Issue - State: open - Opened by jhamman about 1 month ago
Labels: help wanted, V3

#2106 - Fix Array.__array__ for numpy 2.1

Pull Request - State: closed - Opened by dstansby about 1 month ago - 6 comments

#2105 - Bump version of azure-storage-blob

Pull Request - State: closed - Opened by dstansby about 1 month ago - 1 comment

#2104 - Store ABC doesn't match spec

Issue - State: closed - Opened by dcherian about 1 month ago - 2 comments
Labels: bug

#2103 - Deprecate N5Store

Pull Request - State: closed - Opened by jhamman about 1 month ago - 3 comments
Labels: V3

#2102 - Doc/v3 migration guide

Pull Request - State: open - Opened by jhamman about 1 month ago - 7 comments
Labels: V3

#2101 - chore: update pre-commit hooks

Pull Request - State: open - Opened by pre-commit-ci[bot] about 1 month ago - 1 comment

#2100 - Bump the requirements group across 1 directory with 5 updates

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago - 1 comment
Labels: dependencies, python

#2099 - Return TypedDict instances from Metadata.to_dict()

Pull Request - State: open - Opened by ahmadjiha about 1 month ago - 2 comments
Labels: V3

#2098 - Basic Zarr-python 2.x compatibility changes

Pull Request - State: closed - Opened by TomAugspurger about 1 month ago - 2 comments
Labels: V3

#2096 - Bump the requirements group across 1 directory with 4 updates

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago - 1 comment
Labels: dependencies, python

#2095 - Remove un-needed package installs in CI

Pull Request - State: closed - Opened by dstansby about 1 month ago

#2094 - Enable ruff rull B905 on v2 branch

Issue - State: open - Opened by dstansby about 1 month ago
Labels: good-first-issue, V2

#2092 - Bump the requirements group across 1 directory with 7 updates

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago - 1 comment
Labels: dependencies, python

#2091 - Bump the requirements group across 1 directory with 8 updates

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago - 8 comments
Labels: dependencies, python

#2090 - Bump the requirements group across 1 directory with 9 updates

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago - 3 comments
Labels: dependencies, python

#2089 - Bump the requirements group across 1 directory with 10 updates

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago - 3 comments
Labels: dependencies, python

#2088 - Bump the requirements group with 11 updates

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago - 9 comments
Labels: dependencies, python

#2087 - Bump the actions group with 2 updates

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies, github_actions

#2086 - Move BatchedCodecPipeline to zarr.core

Pull Request - State: open - Opened by normanrz about 2 months ago
Labels: V3

#2085 - deprecate n5

Issue - State: closed - Opened by d-v-b about 2 months ago - 1 comment
Labels: V3

#2084 - Inconsistent reading performance with multiple cpu threads

Issue - State: closed - Opened by FelipeMoser about 2 months ago
Labels: bug, V2

#2083 - How easy can it be to create a zarr array

Issue - State: open - Opened by d-v-b about 2 months ago
Labels: enhancement, V3

#2082 - Re-enable dependabot on main branch

Pull Request - State: closed - Opened by dstansby about 2 months ago

#2081 - Failure to encode `object` types when used with `zarr.full`

Issue - State: open - Opened by sneakers-the-rat about 2 months ago - 8 comments
Labels: bug, V2

#2080 - chore: update pre-commit hooks

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 2 months ago

#2079 - User attributes not being saved to file

Issue - State: closed - Opened by dstansby about 2 months ago - 9 comments
Labels: bug

#2078 - feature(store): V3 ZipStore

Pull Request - State: closed - Opened by jhamman about 2 months ago - 8 comments
Labels: V3

#2077 - parallel append broken with ProcessSynchronizer

Issue - State: open - Opened by jasonkena about 2 months ago - 5 comments
Labels: bug, V2

#2076 - Keys not URL-decoded when loaded over the network

Issue - State: open - Opened by aeisenbarth about 2 months ago
Labels: bug, V2

#2075 - Enforce Repo-Review rules

Pull Request - State: closed - Opened by DimitriPapadopoulos about 2 months ago

#2074 - [v2] Drop support for Python 3.9

Pull Request - State: closed - Opened by dstansby about 2 months ago - 3 comments

#2073 - [v2] Fix doctests with numpy 2.0

Pull Request - State: closed - Opened by dstansby about 2 months ago - 3 comments

#2072 - [v3] reorganize package - move most modules to zarr.core

Pull Request - State: closed - Opened by jhamman about 2 months ago - 2 comments
Labels: V3

#2071 - Update TEAM.md

Pull Request - State: closed - Opened by jhamman about 2 months ago - 5 comments

#2070 - Stateful store tests

Pull Request - State: closed - Opened by e-marshall about 2 months ago - 6 comments
Labels: V3

#2069 - Updated test dependencies in pyproject.toml

Pull Request - State: closed - Opened by TomAugspurger about 2 months ago - 3 comments
Labels: V3

#2068 - pytest is an unnecessary dependency?

Issue - State: closed - Opened by TomAugspurger about 2 months ago - 4 comments
Labels: bug

#2067 - data wiped from `MemoryStore` after `store.close` + `array[:]`

Pull Request - State: open - Opened by d-v-b about 2 months ago - 6 comments
Labels: V3

#2066 - Boolean array uses same amount of space as uint8

Issue - State: closed - Opened by haarisr about 2 months ago - 2 comments
Labels: bug

#2065 - Add array storage helpers

Pull Request - State: open - Opened by d-v-b about 2 months ago - 7 comments
Labels: V3

#2064 - implement `store.list_prefix` and `store._set_many`

Pull Request - State: closed - Opened by d-v-b about 2 months ago - 3 comments
Labels: V3

#2063 - Make consolidate_metadata for DirectoryStore following symlinks

Pull Request - State: open - Opened by ctamluu about 2 months ago - 2 comments
Labels: V2

#2062 - Make zarr.config private (> zarr._config)

Pull Request - State: closed - Opened by dstansby about 2 months ago - 1 comment
Labels: V3

#2061 - Make zarr.group private (> zarr._group)

Pull Request - State: closed - Opened by dstansby about 2 months ago - 1 comment
Labels: V3

#2060 - write_empty_chunks and zarr.zeros

Issue - State: open - Opened by AlexHenderson 2 months ago - 1 comment
Labels: V2

#2059 - refactor metadata into `metadata.v2` and `metadata.v3` modules

Pull Request - State: closed - Opened by d-v-b 2 months ago - 1 comment
Labels: V3

#2058 - Handle missing attributes key from metadata, and other fixes

Pull Request - State: closed - Opened by d-v-b 2 months ago - 1 comment

#2057 - chore: update pre-commit hooks

Pull Request - State: closed - Opened by pre-commit-ci[bot] 2 months ago

#2056 - zarr-python cannot read arrays saved by tensorstore using the zstd compressor

Issue - State: open - Opened by mkitti 2 months ago - 1 comment
Labels: bug

#2054 - Enforce ruff/tryceratops rules (TRY)

Pull Request - State: closed - Opened by DimitriPapadopoulos 2 months ago
Labels: V3

#2053 - Apply and enforce more ruff rules

Pull Request - State: closed - Opened by DimitriPapadopoulos 2 months ago - 10 comments
Labels: V3

#2051 - chore: update pre-commit hooks

Pull Request - State: closed - Opened by pre-commit-ci[bot] 2 months ago

#2049 - Apply ruff/flake8-bandit rule B006

Pull Request - State: closed - Opened by DimitriPapadopoulos 2 months ago - 3 comments

#2048 - Redundant list comprehension

Pull Request - State: closed - Opened by DimitriPapadopoulos 2 months ago - 1 comment

#2047 - Multiple imports for an import name

Pull Request - State: closed - Opened by DimitriPapadopoulos 2 months ago - 1 comment

#2046 - Bump fsspec version in tests

Pull Request - State: closed - Opened by dstansby 2 months ago - 1 comment

#2045 - Re-enable dependabot on `main` branch

Issue - State: closed - Opened by dstansby 2 months ago - 2 comments

#2044 - Fix version number in built docs

Pull Request - State: closed - Opened by dstansby 2 months ago - 1 comment
Labels: V3

#2043 - Make zarr.array private (> zarr._array)

Pull Request - State: closed - Opened by dstansby 2 months ago - 1 comment
Labels: V3

#2042 - [v2 / v3 compat] add `Group.array` and `data` kwarg to array creation

Pull Request - State: closed - Opened by d-v-b 2 months ago - 9 comments

#2041 - Adding GPU CI

Issue - State: closed - Opened by akshaysubr 2 months ago - 7 comments

#2039 - chore: update pre-commit hooks

Pull Request - State: closed - Opened by pre-commit-ci[bot] 3 months ago

#2038 - _merge_chunk_array could allocate memory more carefully

Issue - State: open - Opened by rabernat 3 months ago - 5 comments

#2037 - `zarr.{array,config,group}` are both modules and functions

Issue - State: closed - Opened by dstansby 3 months ago - 5 comments

#2036 - Implement legacy vlen-utf8 codec

Pull Request - State: open - Opened by rabernat 3 months ago - 3 comments
Labels: V3

#2035 - Add Codec unit tests

Pull Request - State: open - Opened by rabernat 3 months ago - 2 comments
Labels: V3

#2034 - [v3] benchmarks and performance tools

Issue - State: open - Opened by d-v-b 3 months ago - 1 comment

#2033 - http zarr proxy

Issue - State: open - Opened by d-v-b 3 months ago - 4 comments

#2032 - zarr import fails with undefined numcodecs.Zstd

Issue - State: open - Opened by mschubert 3 months ago - 3 comments
Labels: bug

#2031 - ArrowRecordBatchCodec and vlen string support

Pull Request - State: open - Opened by rabernat 3 months ago - 4 comments
Labels: V3

#2030 - [v3] `ShardingCodec` allows user to violate the `index_codecs` invariant.

Issue - State: open - Opened by zoj613 3 months ago - 6 comments
Labels: bug

#2029 - v3: array written by tensorstore returns all nulls

Issue - State: open - Opened by joshmoore 3 months ago - 4 comments
Labels: bug, V3

#2028 - [v3] Missing `array` method on groups

Issue - State: closed - Opened by tomwhite 3 months ago - 5 comments
Labels: bug

#2027 - [v3] Missing array attributes: nbytes, nchunks, nchunks_initialized

Issue - State: open - Opened by tomwhite 3 months ago - 6 comments
Labels: bug

#2026 - Fancy reprs for groups and arrays

Issue - State: open - Opened by d-v-b 3 months ago