zakandrewking/escher issues and pull requests

#396 - Unable to Merge Metabolites by Overlapping Them in Escher Webtool

Issue - State: open - Opened by emarquezz 8 days ago

#395 - The rotation mode of the web tool does not work

Issue - State: open - Opened by SizheQiu 22 days ago

#394 - add color modifcation for node

Pull Request - State: open - Opened by forxhunter 3 months ago - 1 comment

#393 - Feature/test for opencobra

Pull Request - State: closed - Opened by jambo0624 4 months ago

#392 - Feat: flux animation & support for Python 3.10

Pull Request - State: closed - Opened by jambo0624 5 months ago

#391 - streamlit BIGG

Issue - State: closed - Opened by gauravcodepro 5 months ago - 2 comments

#390 - How can we turn up the javasprict？

Issue - State: open - Opened by wpg13 11 months ago

#389 - Hi, I tried to install Escher in Python 3.12 but the installation failed through both conda and pip. Is Escher in Python 3.12 supported?

Issue - State: open - Opened by dg712831 12 months ago - 2 comments

#388 - Python 3.12 support

Issue - State: open - Opened by mretier about 1 year ago - 1 comment

#387 - Map database?

Issue - State: open - Opened by dalbabur about 1 year ago

#386 - [draft] Support for Python 3.10

Pull Request - State: open - Opened by kharmabum about 1 year ago - 1 comment

#385 - Is there a way to display all reactions from a model?

Issue - State: open - Opened by MauroBattipede over 1 year ago - 1 comment

#384 - When I loaded my model, it was on escher's website, and I couldn't load it.

Issue - State: open - Opened by ChenCongZ over 1 year ago

#383 - Not compatible with the latest version of MarkupSafe (2.1.2)

Issue - State: open - Opened by ahoiching over 1 year ago

#382 - Feat/publish

Pull Request - State: closed - Opened by JanNiklasWeder almost 2 years ago

#381 - Bump express from 4.17.1 to 4.18.2

Pull Request - State: open - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#380 - Bump qs from 6.5.2 to 6.5.3

Pull Request - State: open - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#379 - Bump decode-uri-component from 0.2.0 to 0.2.2

Pull Request - State: open - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#378 - Is it possible to automatically calculate the layout of maps?

Issue - State: open - Opened by junjiecai about 2 years ago

#377 - Is it possible to update Jinja2 dependency to >= 3?

Issue - State: open - Opened by eladnoor over 2 years ago - 3 comments

#376 - Bump terser from 4.1.2 to 4.8.1

Pull Request - State: open - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#375 - Bump moment from 2.24.0 to 2.29.4

Pull Request - State: open - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#374 - Bump jsdom from 15.1.1 to 16.5.0

Pull Request - State: open - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#373 - Bump eventsource from 1.0.7 to 1.1.1

Pull Request - State: open - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#372 - Bump moment from 2.24.0 to 2.29.2

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#371 - Importing text into tooltips

Issue - State: open - Opened by ParsaGhadermazi almost 3 years ago

#370 - Bump follow-redirects from 1.7.0 to 1.14.8

Pull Request - State: open - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies

#369 - Bump pathval from 1.1.0 to 1.1.1

Pull Request - State: open - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies

#368 - Bump node-fetch from 2.6.0 to 2.6.7

Pull Request - State: open - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies

#367 - Bump follow-redirects from 1.7.0 to 1.14.7

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago - 1 comment
Labels: dependencies

#366 - Using Escher in Google Colab

Issue - State: open - Opened by thuanguyen almost 3 years ago - 1 comment

#365 - Migration from Goodtables to Frictionless Repository

Issue - State: open - Opened by sapetti9 about 3 years ago

#364 - Comparison methods for reactions & metabolites with multiple data sets

Issue - State: open - Opened by jacobmartin2022 about 3 years ago

#363 - Reactions "Absolute value" resets when running in loop in python

Issue - State: closed - Opened by jacobmartin2022 about 3 years ago - 1 comment

#362 - Is there a way to draw all reactions from a model?

Issue - State: open - Opened by bananabenana about 3 years ago

#361 - Bump tar from 4.4.10 to 4.4.19

Pull Request - State: open - Opened by dependabot[bot] about 3 years ago
Labels: dependencies

#360 - Bump path-parse from 1.0.6 to 1.0.7

Pull Request - State: open - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#359 - Bump tar from 4.4.10 to 4.4.15

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#358 - visualize an SMBL model?

Issue - State: open - Opened by parsanayyara over 3 years ago - 1 comment

#357 - issue with loading a model

Issue - State: closed - Opened by elvis-217 over 3 years ago

#356 - Bump postcss from 7.0.17 to 7.0.36

Pull Request - State: open - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#355 - Bump ws from 7.1.0 to 7.4.6

Pull Request - State: open - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#354 - Bump dns-packet from 1.3.1 to 1.3.4

Pull Request - State: open - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#353 - Bump hosted-git-info from 2.7.1 to 2.8.9

Pull Request - State: open - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#352 - Bump lodash from 4.17.14 to 4.17.21

Pull Request - State: open - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#351 - Bump handlebars from 4.1.2 to 4.7.7

Pull Request - State: open - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#350 - Bump underscore from 1.9.1 to 1.12.1

Pull Request - State: open - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#349 - Bump ssri from 6.0.1 to 6.0.2

Pull Request - State: open - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#348 - Is the Escher widget compatible with JupyterLab 3?

Issue - State: open - Opened by danolson1 over 3 years ago - 11 comments

#347 - escher git dependency

Issue - State: open - Opened by danolson1 over 3 years ago

#346 - Bump y18n from 3.2.1 to 3.2.2

Pull Request - State: open - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#345 - Using my own metabolic map that I drew on escher

Issue - State: open - Opened by abshah1 over 3 years ago - 1 comment

#344 - Bump elliptic from 6.5.0 to 6.5.4

Pull Request - State: open - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#343 - Needed: Method for evaluating AND: MAX

Issue - State: open - Opened by NicWir almost 4 years ago

#342 - Issue when HTML element's id string is passed to Builder constructor

Issue - State: open - Opened by pitkunait almost 4 years ago

#341 - Bump ini from 1.3.5 to 1.3.7

Pull Request - State: open - Opened by dependabot[bot] almost 4 years ago
Labels: dependencies

#340 - merging two pathways with common metabolite node

Issue - State: closed - Opened by chiwwong about 4 years ago

#339 - Bump node-fetch from 2.6.0 to 2.6.1

Pull Request - State: closed - Opened by dependabot[bot] about 4 years ago - 1 comment
Labels: dependencies

#338 - Bump http-proxy from 1.17.0 to 1.18.1

Pull Request - State: open - Opened by dependabot[bot] about 4 years ago
Labels: dependencies

#337 - Bump handlebars from 4.1.2 to 4.7.6

Pull Request - State: closed - Opened by dependabot[bot] about 4 years ago - 1 comment
Labels: dependencies

#336 - Bump elliptic from 6.5.0 to 6.5.3

Pull Request - State: closed - Opened by dependabot[bot] over 4 years ago - 1 comment
Labels: dependencies

#335 - Bump lodash from 4.17.14 to 4.17.19

Pull Request - State: closed - Opened by dependabot[bot] over 4 years ago - 1 comment
Labels: dependencies

#334 - Error installing Jupyter widget

Issue - State: open - Opened by wrcannon over 4 years ago

#333 - Jupyter Widget not working?

Issue - State: closed - Opened by LauraMagorium over 4 years ago

#332 - Bump websocket-extensions from 0.1.3 to 0.1.4

Pull Request - State: open - Opened by dependabot[bot] over 4 years ago
Labels: dependencies

#331 - Cannot import escher

Issue - State: closed - Opened by gretagecse over 4 years ago

#330 - Bump jquery from 3.4.1 to 3.5.0

Pull Request - State: open - Opened by dependabot[bot] over 4 years ago
Labels: dependencies

#329 - Question on using gene_data for Builder() in python API

Issue - State: closed - Opened by forestrywhale over 4 years ago - 3 comments

#328 - Bump acorn from 6.2.0 to 6.4.1

Pull Request - State: open - Opened by dependabot[bot] over 4 years ago
Labels: dependencies

#327 - Metabolic pathway network layout style changes

Issue - State: open - Opened by liudongliangHI almost 5 years ago

#326 - Bump handlebars from 4.1.2 to 4.5.3

Pull Request - State: closed - Opened by dependabot[bot] almost 5 years ago - 1 comment
Labels: dependencies

#325 - Graphical element symbolizing enzyme

Issue - State: open - Opened by denisshepelin almost 5 years ago

#324 - Bump eslint-utils from 1.3.1 to 1.4.3

Pull Request - State: open - Opened by dependabot[bot] about 5 years ago
Labels: dependencies

#323 - Absolute value automatically turns on when setting reaction data

Issue - State: open - Opened by z-haiman about 5 years ago - 2 comments

#322 - PYK flux on core map not showing

Issue - State: closed - Opened by Karrenbelt about 5 years ago - 1 comment

#321 - installing escher jupyter notebook extension

Issue - State: closed - Opened by glucksfall about 5 years ago - 5 comments

#320 - Cannot read property 'apply_metabolite_data_to_map' or 'apply_reaction_data_to_map' error | When trying to set both metabolite and reaction data at the same time.

Issue - State: closed - Opened by alperdokay about 5 years ago - 5 comments

GitHub / zakandrewking/escher issues and pull requests