yoshidk6/survParamSim issues and pull requests

#43 - New functions to calculate average survival and hazard ratios

Pull Request - State: closed - Opened by yoshidk6 over 1 year ago

#42 - `calc_hr_pi()` doesn't work with ordered variable for grouping

Issue - State: closed - Opened by yoshidk6 over 2 years ago - 1 comment

#41 - Error with `calc_km_pi()` when trt and group has overlapping variables

Issue - State: closed - Opened by yoshidk6 about 3 years ago - 1 comment

#40 - Extract p-value of log-rank test in calc_hr_pi()

Issue - State: closed - Opened by yoshidk6 over 3 years ago - 1 comment

#39 - Function link broken

Issue - State: closed - Opened by yoshidk6 over 3 years ago - 1 comment

#38 - Error in km pi with trt==NULL

Issue - State: closed - Opened by yoshidk6 over 3 years ago - 1 comment

#37 - Document extract_median_delta

Issue - State: closed - Opened by yoshidk6 over 3 years ago - 1 comment

#36 - Make output column order consistent

Issue - State: closed - Opened by yoshidk6 over 3 years ago - 1 comment

#35 - extract_medsurv_delta_pi() with three treatment levels

Issue - State: closed - Opened by yoshidk6 over 3 years ago - 1 comment

#34 - Enable >2 levels of treatment for HR calculation

Pull Request - State: closed - Opened by yoshidk6 over 3 years ago

#33 - correctly export trt levels in summary.hrpi

Issue - State: closed - Opened by yoshidk6 over 3 years ago - 1 comment

#32 - Remove trt column names from the output trtterm variable

Issue - State: closed - Opened by yoshidk6 over 3 years ago - 1 comment

#31 - Add documentation - use factor for specifying which value to use as reference group

Issue - State: closed - Opened by yoshidk6 over 3 years ago

#30 - Allow subgroups not to have subjects in all trt levels for HR calculation?

Issue - State: closed - Opened by yoshidk6 over 3 years ago - 1 comment

#29 - Error with surv_param_sim_resample when generating hr_pi or km_pi with group variables not stratified for resampling?

Issue - State: closed - Opened by yoshidk6 over 3 years ago - 1 comment

#28 - Error with surv_param_sim_resample when some covariates have NA?

Issue - State: closed - Opened by yoshidk6 over 3 years ago - 1 comment

#27 - Require new tidyr versions

Issue - State: closed - Opened by yoshidk6 over 3 years ago

#26 - Add observed delta median survival time in outputs

Issue - State: closed - Opened by yoshidk6 over 3 years ago

#25 - Histogram for simulated delta of median survival time?

Issue - State: open - Opened by yoshidk6 over 3 years ago

#24 - Show warning when calculating PI of median survival time with immature survival prediction

Issue - State: closed - Opened by yoshidk6 over 3 years ago - 1 comment

#23 - Does this need distinct?

Issue - State: closed - Opened by yoshidk6 about 4 years ago - 1 comment

#22 - Show warning for slow km pi calculation

Issue - State: closed - Opened by yoshidk6 about 4 years ago - 1 comment

#21 - Allow more than two levels for hazard ratio calculation?

Issue - State: closed - Opened by yoshidk6 over 4 years ago - 1 comment

#20 - surv_param_sim_resample fails

Issue - State: closed - Opened by yoshidk6 over 4 years ago
Labels: bug

#19 - Show error when extra variable is included in calc_km_pi for sim from surv_param_sim_resample

Issue - State: closed - Opened by yoshidk6 almost 5 years ago - 2 comments
Labels: priority

#18 - Show N for extract_hr_pi?

Issue - State: open - Opened by yoshidk6 about 5 years ago - 1 comment

#17 - Include last observed timepoint for K-M PI simulation summary

Issue - State: open - Opened by yoshidk6 about 5 years ago

#16 - Is length.out = 100 sufficient for km_pi functions?

Issue - State: open - Opened by yoshidk6 about 5 years ago

#15 - Tests on other models than the default weibull distribution

Issue - State: open - Opened by yoshidk6 about 5 years ago

#14 - Make it work on exponential model

Issue - State: closed - Opened by yoshidk6 about 5 years ago - 1 comment

#13 - Correct observed K-M curve, there need to be two records for event timepoints to make the lines vertical

Issue - State: closed - Opened by yoshidk6 about 5 years ago - 2 comments

#12 - Add censoring information on the observed K-M curves

Issue - State: closed - Opened by yoshidk6 about 5 years ago - 1 comment

#11 - Simulate from point estimates

Issue - State: closed - Opened by Kagedal about 5 years ago - 1 comment

#10 - Replace km test for plots with simulated KM quantiles numbers

Issue - State: closed - Opened by yoshidk6 about 5 years ago

#9 - Rename summary functions to extract_hr_quantile

Issue - State: closed - Opened by yoshidk6 about 5 years ago - 1 comment

#8 - Add default plot method for survparamsim.hrpi and survparamsim.kmpi classes

Issue - State: open - Opened by yoshidk6 about 5 years ago

#7 - Throw error if not all groups have both treatment arms in `calc_hr_pi`

Issue - State: closed - Opened by yoshidk6 about 5 years ago - 1 comment

#6 - Export N per group somewhere in the output

Issue - State: closed - Opened by yoshidk6 about 5 years ago - 1 comment

#5 - Write test for calc_hr_pi

Issue - State: closed - Opened by yoshidk6 about 5 years ago - 1 comment

#4 - Write test for calc_km_pi for graphics

Issue - State: closed - Opened by yoshidk6 about 5 years ago - 1 comment

#3 - Create vignette

Issue - State: closed - Opened by yoshidk6 about 5 years ago

#2 - In summary(hi_pi), shows which is the control and which is the treatment

Issue - State: closed - Opened by yoshidk6 about 5 years ago - 1 comment

#1 - Implement get_data function to extract raw simulation results?

Issue - State: closed - Opened by yoshidk6 about 5 years ago - 1 comment

GitHub / yoshidk6/survParamSim issues and pull requests