Ecosyste.ms: Issues

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GitHub / ylab-hi/pxblat issues and pull requests

#344 - build(deps): bump pypa/cibuildwheel from 2.18.1 to 2.19.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 1 comment
Labels: dependencies, github_actions

#343 - build(deps-dev): bump cibuildwheel from 2.18.1 to 2.19.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 1 comment
Labels: dependencies, python

#342 - build(deps-dev): bump ruff from 0.4.6 to 0.4.8

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 1 comment
Labels: dependencies, python

#341 - build(deps-dev): bump pytest from 8.2.1 to 8.2.2

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 1 comment
Labels: dependencies, python

#340 - build(deps-dev): bump ruff from 0.4.6 to 0.4.7

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 2 comments
Labels: dependencies, python

#339 - build(deps-dev): bump ruff from 0.4.5 to 0.4.6

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 1 comment
Labels: dependencies, python

#338 - build(deps-dev): bump ruff from 0.4.4 to 0.4.5

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 2 comments
Labels: dependencies, python

#337 - build(deps-dev): bump sphinx-autoapi from 3.1.0 to 3.1.1

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 2 comments
Labels: dependencies, python

#336 - build(deps): bump setuptools from 69.5.1 to 70.0.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 2 comments
Labels: dependencies, python

#335 - build(deps): bump pypa/cibuildwheel from 2.17.0 to 2.18.1

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 2 comments
Labels: dependencies, github_actions

#334 - build(deps-dev): bump sphinx-autoapi from 3.0.0 to 3.1.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 2 comments
Labels: dependencies, python

#333 - build(deps-dev): bump cibuildwheel from 2.18.0 to 2.18.1

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 2 comments
Labels: dependencies, python

#332 - build(deps-dev): bump pytest from 8.2.0 to 8.2.1

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 2 comments
Labels: dependencies, python

#331 - build(deps): bump sphinx-click from 5.2.1 to 6.0.0

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 2 comments
Labels: dependencies, python

#330 - build(deps): bump sphinx-click from 5.2.2 to 6.0.0 in /docs

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 2 comments
Labels: dependencies, python

#326 - build(deps): bump pypa/cibuildwheel from 2.17.0 to 2.18.0

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 2 comments
Labels: dependencies, github_actions

#325 - build(deps-dev): bump cibuildwheel from 2.17.0 to 2.18.0

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 2 comments
Labels: dependencies, python

#324 - build(deps-dev): bump ruff from 0.4.2 to 0.4.4

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 2 comments
Labels: dependencies, python

#323 - build(deps): bump poetry from 1.8.2 to 1.8.3 in /.github/workflows

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#322 - build(deps-dev): bump ruff from 0.4.2 to 0.4.3

Pull Request - State: open - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#321 - build(deps): bump myst-parser from 3.0.0 to 3.0.1

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#320 - build(deps): bump mashumaro from 3.12 to 3.13

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#319 - build(deps): bump virtualenv from 20.26.0 to 20.26.1 in /.github/workflows

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#318 - build(deps): bump myst-parser from 3.0.0 to 3.0.1 in /docs

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#317 - build(deps-dev): bump pytest from 8.1.1 to 8.2.0

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#316 - build(deps-dev): bump pytest-xdist from 3.5.0 to 3.6.1

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#315 - build(deps): bump myst-parser from 3.0.0 to 3.0.1

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#314 - build(deps-dev): bump ruff from 0.4.1 to 0.4.2

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#313 - build(deps-dev): bump mypy from 1.9.0 to 1.10.0

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#312 - build(deps): bump virtualenv from 20.25.3 to 20.26.0 in /.github/workflows

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#311 - build(deps): bump myst-parser from 2.0.0 to 3.0.0 in /docs

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#310 - build(deps): bump myst-parser from 2.0.0 to 3.0.0

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#309 - build(deps-dev): bump ruff from 0.4.0 to 0.4.1

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#308 - build(deps): bump sphinx from 7.3.6 to 7.3.7

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies, python

#307 - build(deps-dev): bump ruff from 0.3.7 to 0.4.0

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies, python

#306 - build(deps): bump sphinx from 7.2.6 to 7.3.6

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies, python

#305 - build(deps): bump virtualenv from 20.25.2 to 20.25.3 in /.github/workflows

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies, python

#304 - build(deps): bump sphinx from 7.2.6 to 7.3.5

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 2 comments
Labels: dependencies, python

#303 - build(deps-dev): bump sphinx-autobuild from 2024.4.13 to 2024.4.16

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies, python

#302 - build(deps): bump virtualenv from 20.25.1 to 20.25.2 in /.github/workflows

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies, python

#301 - build(deps-dev): bump nox from 2024.3.2 to 2024.4.15

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies, python

#300 - build(deps): bump nox from 2024.3.2 to 2024.4.15 in /.github/workflows

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies, python

#299 - build(deps-dev): bump sphinx-autobuild from 2024.2.4 to 2024.4.13

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 2 comments
Labels: dependencies, python

#298 - build(deps): bump setuptools from 69.2.0 to 69.5.1

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 2 comments
Labels: dependencies, python

#297 - build(deps-dev): bump ruff from 0.3.4 to 0.3.7

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies, python

#296 - build(deps): bump typer from 0.12.0 to 0.12.3

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies, python

#295 - build(deps): bump typer from 0.12.0 to 0.12.2

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies, python

#294 - bump typer from 0.12.0 to 0.12.1

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment

#293 - build(deps-dev): bump ruff from 0.3.4 to 0.3.5

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies, python

#292 - build(deps): bump typer from 0.11.1 to 0.12.0

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago
Labels: dependencies, python

#291 - build(deps): bump typer from 0.11.0 to 0.11.1

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago
Labels: dependencies, python

#290 - build(deps-dev): bump pybind11-stubgen from 2.5 to 2.5.1

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago
Labels: dependencies, python

#289 - build(deps): bump pybind11 from 2.11.1 to 2.12.0

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago
Labels: dependencies, python

#288 - build(deps): bump typer from 0.10.0 to 0.11.0

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago
Labels: dependencies, python

#287 - build(deps): bump typer from 0.9.0 to 0.10.0

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago
Labels: dependencies, python

#286 - build(deps-dev): bump delocate from 0.10.7 to 0.11.0

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago
Labels: dependencies, python

#285 - build(deps-dev): bump ruff from 0.3.3 to 0.3.4

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago
Labels: dependencies, python

#284 - build(deps-dev): bump ruff from 0.3.2 to 0.3.3

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, python

#283 - build(deps): bump setuptools from 69.1.1 to 69.2.0

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, python

#282 - build(deps-dev): bump cibuildwheel from 2.16.5 to 2.17.0

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, python

#281 - build(deps): bump pypa/cibuildwheel from 2.16.5 to 2.17.0

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, github_actions

#280 - build(deps-dev): bump sphinx-immaterial from 0.11.10 to 0.11.11

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago - 1 comment
Labels: dependencies, python

#279 - build(deps-dev): bump ruff from 0.3.1 to 0.3.2

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, python

#278 - build(deps-dev): bump pytest from 8.1.0 to 8.1.1

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, python

#277 - build(deps-dev): bump mypy from 1.8.0 to 1.9.0

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, python

#276 - build(deps): bump pypa/gh-action-pypi-publish from 1.8.12 to 1.8.14

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, github_actions

#275 - build(deps-dev): bump ruff from 0.3.0 to 0.3.1

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, python

#274 - build(deps-dev): bump pybind11-stubgen from 2.4.2 to 2.5

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, python

#273 - build(deps): bump poetry from 1.8.1 to 1.8.2 in /.github/workflows

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, python

#272 - build(deps): bump nox from 2023.4.22 to 2024.3.2 in /.github/workflows

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, python

#271 - build(deps-dev): bump pytest from 8.0.2 to 8.1.0

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, python

#270 - build(deps-dev): bump nox from 2023.4.22 to 2024.3.2

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, python

#269 - build(deps-dev): bump ruff from 0.2.2 to 0.3.0

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, python

#268 - build(deps): bump rich from 13.7.0 to 13.7.1

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, python

#267 - build(deps): bump pypa/gh-action-pypi-publish from 1.8.11 to 1.8.12

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, github_actions

#266 - build(deps): bump poetry from 1.8.0 to 1.8.1 in /.github/workflows

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, python

#265 - build(deps): bump poetry from 1.7.1 to 1.8.0 in /.github/workflows

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, python

#264 - build(deps-dev): bump pytest from 8.0.1 to 8.0.2

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, python

#263 - build(deps): bump setuptools from 69.1.0 to 69.1.1

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, python

#262 - build(deps): bump virtualenv from 20.25.0 to 20.25.1 in /.github/workflows

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies, python

#261 - build(deps-dev): bump ruff from 0.2.1 to 0.2.2

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies, python

#260 - build(deps-dev): bump pytest from 8.0.0 to 8.0.1

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies, python

#259 - build(deps): bump urllib3 from 2.2.0 to 2.2.1

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies, python

#258 - build(deps): bump setuptools from 69.0.3 to 69.1.0

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies, python

#257 - build(deps-dev): bump ruff from 0.2.0 to 0.2.1

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies, python

#256 - build(deps): bump pysimdjson from 5.0.2 to 6.0.2

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies, python

#255 - build(deps): bump linkify-it-py from 2.0.2 to 2.0.3

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies, python

#254 - Benchmark

Pull Request - State: closed - Opened by cauliyang 8 months ago

#253 - build(deps): bump linkify-it-py from 2.0.2 to 2.0.3 in /docs

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies, python

#252 - build(deps): bump pip from 23.3.2 to 24.0 in /.github/workflows

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies, python

#251 - build(deps-dev): bump sphinx-autobuild from 2021.3.14 to 2024.2.4

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies, python

#250 - build(deps): bump linkify-it-py from 2.0.2 to 2.0.3

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies, python

#249 - build(deps): bump release-drafter/release-drafter from 5.25.0 to 6.0.0

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies, github_actions

#248 - build(deps-dev): bump ruff from 0.1.15 to 0.2.0

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies, python

#247 - build(deps-dev): bump pytest-sugar from 0.9.7 to 1.0.0

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies, python

#246 - fix #244: Simplify conditional statement in query_server() function

Pull Request - State: closed - Opened by cauliyang 8 months ago - 3 comments
Labels: Bug fix, Other, Review effort [1-5]: 2

#245 - [Bug]: gfClient error exit

Issue - State: open - Opened by anderdnavarro 8 months ago - 11 comments
Labels: bug

#244 - [Bug]: Output is not a QueryResult

Issue - State: closed - Opened by anderdnavarro 8 months ago - 15 comments
Labels: bug

#243 - build(deps): bump codecov/codecov-action from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies, github_actions

#242 - build(deps-dev): bump cibuildwheel from 2.16.4 to 2.16.5

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies, python