Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / yardencsGitHub/tweetynet issues and pull requests
#223 - Training PREP error: AttributeError: 'Annotation' object has no attribute 'seq'
Issue -
State: closed - Opened by sfcooke96 9 months ago
- 4 comments
#222 - Deleted dependency detected
Issue -
State: closed - Opened by ashishbijlani 9 months ago
- 1 comment
Labels: wontfix
#221 - termination message
Issue -
State: closed - Opened by abscodeice 10 months ago
- 2 comments
#220 - ValueError: the following options from TRAIN section in the config file 'gy6or6_train.toml' are not valid: {'models'}
Issue -
State: closed - Opened by WalidERRAIS over 1 year ago
- 2 comments
#219 - CLN: Make fixes to work with vak 0.8.0, fixes #218
Pull Request -
State: closed - Opened by NickleDave over 1 year ago
#218 - Make TweetyNet work with vak 0.8.0
Issue -
State: closed - Opened by NickleDave over 1 year ago
#217 - CI: Fix ci.yml so we don't get spurious failures
Pull Request -
State: closed - Opened by NickleDave about 2 years ago
- 1 comment
#216 - Fix dependencies, remove logger arg
Pull Request -
State: closed - Opened by NickleDave about 2 years ago
#215 - DEV: raise lower bound on `vak` to 0.6.0, remove `logger` argument from `TweetyNet.from_config`
Issue -
State: closed - Opened by NickleDave about 2 years ago
- 1 comment
#214 - DEV: raise lower bound on Python to 3.8
Issue -
State: closed - Opened by NickleDave about 2 years ago
#213 - Pre-trained model
Issue -
State: closed - Opened by danstowell over 2 years ago
- 5 comments
#212 - document code in ./article/README.md, fix #197
Pull Request -
State: closed - Opened by NickleDave over 2 years ago
#211 - finish writing 'replicate-key-results/runall.sh'
Issue -
State: closed - Opened by NickleDave over 2 years ago
Labels: wontfix
#210 - add src/scripts/results-dataset-scripts
Pull Request -
State: closed - Opened by NickleDave over 2 years ago
#209 - add email + orcid for Emily to CITATION.cff
Pull Request -
State: closed - Opened by NickleDave over 2 years ago
#208 - Fix link to gif
Pull Request -
State: closed - Opened by NickleDave over 2 years ago
#207 - Add demo gif
Pull Request -
State: closed - Opened by NickleDave over 2 years ago
#206 - make more updates to README, fix #203
Pull Request -
State: closed - Opened by NickleDave over 2 years ago
#205 - make DVC dataset and add links to README
Issue -
State: closed - Opened by NickleDave over 2 years ago
- 1 comment
#204 - Error processing files with one annotation
Issue -
State: closed - Opened by vivinastase over 2 years ago
- 6 comments
Labels: BUG
#203 - add links to datasets in cloud storage, in article README
Issue -
State: closed - Opened by NickleDave over 2 years ago
- 1 comment
#202 - DOC: add CITATION.cff, fixes #162
Pull Request -
State: closed - Opened by NickleDave over 2 years ago
#201 - add src/scripts/replicate-key-result/runall.sh
Pull Request -
State: closed - Opened by NickleDave over 2 years ago
#200 - add .csv files generated by `vak prep`
Pull Request -
State: closed - Opened by NickleDave over 2 years ago
#199 - fix up conda env files for article
Issue -
State: closed - Opened by NickleDave over 2 years ago
- 1 comment
#198 - DOC: revise README, fixes #196
Pull Request -
State: closed - Opened by NickleDave over 2 years ago
#197 - finish documenting code in `./article`
Issue -
State: closed - Opened by NickleDave over 2 years ago
#196 - test conda-forge install and then update install instructions
Issue -
State: closed - Opened by NickleDave over 2 years ago
#195 - Prep for conda forge
Pull Request -
State: closed - Opened by NickleDave over 2 years ago
#194 - Clean up for version 0.7.0
Pull Request -
State: closed - Opened by NickleDave over 2 years ago
- 1 comment
#193 - Add env files and readme to article
Pull Request -
State: closed - Opened by NickleDave over 2 years ago
#192 - add files to `./article` that capture environment used for results in paper
Issue -
State: closed - Opened by NickleDave over 2 years ago
Labels: writing/paper
#191 - add README to `./article` that documents how to install / reproduce article results
Issue -
State: closed - Opened by NickleDave over 2 years ago
Labels: writing/paper, DOC
#190 - add latex files for submitted revision, fix #189
Pull Request -
State: closed - Opened by NickleDave over 2 years ago
#189 - add submitted revision, .tex, .bib, etc
Issue -
State: closed - Opened by NickleDave almost 3 years ago
#188 - CLN: factor out source data code, fixes #187
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
#187 - factor out source data code
Issue -
State: closed - Opened by NickleDave almost 3 years ago
#186 - docs: add NickleDave as a contributor for code, bug, data, doc, ideas, question, tool, test, tutorial, talk
Pull Request -
State: closed - Opened by allcontributors[bot] almost 3 years ago
#185 - docs: add yardencsGitHub as a contributor for code, bug, data, doc, ideas, question, tool, test, tutorial, talk
Pull Request -
State: closed - Opened by allcontributors[bot] almost 3 years ago
#184 - docs: add zhehao-nkd as a contributor for bug
Pull Request -
State: closed - Opened by allcontributors[bot] almost 3 years ago
#183 - Fix packaging, fixes #177
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
#182 - EXPT: run a couple more window size experiments
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
- 2 comments
#181 - make threshold lines thicker in annotation figure
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
- 1 comment
#180 - add separate README to article/ that documents how to install
Issue -
State: closed - Opened by NickleDave almost 3 years ago
Labels: DOC
#179 - Create annotation figure spectrograms with matlab
Pull Request -
State: closed - Opened by yardencsGitHub almost 3 years ago
- 3 comments
#178 - fix panel + tweak layout of bf-behavior.ai and .png
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
#177 - fix packaging
Issue -
State: closed - Opened by NickleDave almost 3 years ago
- 2 comments
Labels: BUG, DEV
#176 - swapping panels A,B
Pull Request -
State: closed - Opened by yardencsGitHub almost 3 years ago
#175 - FIG: change 'unl' to 'bg' in schematic figure
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
#174 - Tweetynet v svm stats
Pull Request -
State: closed - Opened by yardencsGitHub almost 3 years ago
- 1 comment
#173 - Run filter size and number expts #130
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
#172 - Vak crashes when .cbin files dont have corresponding .rec files
Issue -
State: closed - Opened by avanikop almost 3 years ago
- 2 comments
#171 - adopt all-contributors
Issue -
State: closed - Opened by NickleDave almost 3 years ago
- 2 comments
Labels: ENH, DOC
#170 - BUG: remove 'padding' from kwargs to fix #166
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
- 4 comments
#169 - fix y limits in tweetynet-v-svm figure
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
#168 - add a code of conduct
Issue -
State: closed - Opened by NickleDave almost 3 years ago
- 1 comment
Labels: DOC
#167 - add a contributing.md
Issue -
State: closed - Opened by NickleDave almost 3 years ago
- 1 comment
Labels: wontfix, DOC
#166 - fix "Invalid padding string 'SAME'" error that pytorch > 1.7.1 raises
Issue -
State: closed - Opened by NickleDave almost 3 years ago
- 1 comment
Labels: BUG
#165 - add demo GIF
Issue -
State: closed - Opened by NickleDave almost 3 years ago
- 1 comment
Labels: DOC
#164 - fix link in README, tweak text slightly
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
#163 - make further tweaks to architecture figures
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
#162 - add citation.cff file
Issue -
State: closed - Opened by NickleDave almost 3 years ago
- 1 comment
Labels: DOC
#161 - regenerate tweetynet-v-svm fig with final results
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
#160 - Add final canary tweetynet v svm results
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
#159 - commit tweaks I forgot to commit
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
#158 - rewrite post-processing + hyperparams fig
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
#157 - BUG: fix how 'semi-automated cleaning' works in `hvc.resegment`
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
#156 - Tweak figs
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
#155 - Fix make error curve seg params arg
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
#154 - move example + schematic to top of bf-behavior figure
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
#153 - add .ai and .png file of post-processing figure
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
#152 - update fig files after adding updated canary csvs
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
#151 - Rerun canary error vak040b5
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
#150 - add scripts to estimate audio segmenting parameters for canaries, fix #142
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
#149 - Add spect to bf behav fig
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
#148 - Make article eval add data lineage metadata
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
#147 - Update annotation fig panel numbering
Pull Request -
State: closed - Opened by yardencsGitHub almost 3 years ago
- 1 comment
#146 - perform statistical test on SVM v TweetyNet accuracy at largest data point
Issue -
State: closed - Opened by NickleDave almost 3 years ago
- 4 comments
Labels: wontfix, experiment, writing/paper
#145 - modify first annotation figure as discussed
Issue -
State: closed - Opened by NickleDave almost 3 years ago
- 2 comments
Labels: figure, writing/paper
#144 - make sure source data csv files include data lineage / metadata
Issue -
State: closed - Opened by NickleDave almost 3 years ago
- 1 comment
#143 - update figure code with tweaks: src/scripts/fig-post-process-error-rates.ipynb
Pull Request -
State: closed - Opened by NickleDave almost 3 years ago
#142 - add "least bad" segmenting parameters for canaries + script to compute them
Issue -
State: closed - Opened by NickleDave almost 3 years ago
#140 - add "representative examples" to results figures
Issue -
State: closed - Opened by NickleDave almost 3 years ago
- 3 comments
Labels: figure, writing/paper
#139 - recompute syllable error rate for canary experiments
Issue -
State: closed - Opened by NickleDave almost 3 years ago
- 1 comment
#132 - 3.2 better integration with parallel work
Issue -
State: closed - Opened by NickleDave over 3 years ago
- 1 comment
Labels: writing/paper, essential-revision
#131 - Add hvc expt scripts + results + figure
Pull Request -
State: closed - Opened by NickleDave over 3 years ago
- 5 comments
#130 - test # of features (maps) + filter sizes for BFs
Issue -
State: closed - Opened by NickleDave over 3 years ago
- 1 comment
Labels: experiment, minor-point-revision
#108 - plot training histories for different hidden size models
Issue -
State: closed - Opened by NickleDave over 3 years ago
- 1 comment
#107 - plot examples of predictions on bl26lb16 from models trained w/diff spect params
Issue -
State: closed - Opened by NickleDave over 3 years ago
- 1 comment
#106 - fix + test canary npz files
Issue -
State: closed - Opened by NickleDave over 3 years ago
- 2 comments
#104 - change run_eval script so it can run without eval config files
Issue -
State: closed - Opened by NickleDave over 3 years ago
- 1 comment
#101 - add language in intro to emphasize problems resulting from segmentation
Issue -
State: closed - Opened by NickleDave over 3 years ago
- 2 comments
Labels: writing/paper, essential-revision
#99 - rewrite title/abstract to emphasize end-to-end segmentation free model
Issue -
State: closed - Opened by NickleDave over 3 years ago
- 1 comment
Labels: writing/paper
#93 - rerun summary data results scripts after final re-factoring
Issue -
State: closed - Opened by NickleDave over 3 years ago
- 1 comment
Labels: wontfix, experiment, essential-revision
#78 - 10. relationship to the issue of potential under/overfitting is not
Issue -
State: closed - Opened by NickleDave over 3 years ago
- 2 comments
Labels: writing/paper, minor-point-revision
#74 - clarify in methods we use "concatenate" method with BiLSTM output
Issue -
State: closed - Opened by NickleDave over 3 years ago
- 1 comment
Labels: writing/paper
#72 - 1.4 discuss choice of bin size
Issue -
State: closed - Opened by NickleDave over 3 years ago
- 3 comments
Labels: writing/paper, essential-revision
#69 - 1.4 Relative influence of sequential versus local features
Issue -
State: closed - Opened by NickleDave over 3 years ago
- 3 comments
Labels: experiment, writing/paper, essential-revision
#66 - 1.2a performance comparison to other potential types of pooling that justifies the choice
Issue -
State: closed - Opened by NickleDave over 3 years ago
- 4 comments
Labels: experiment, essential-revision
#65 - 1.2a add details regarding choice of pooling operation
Issue -
State: closed - Opened by NickleDave over 3 years ago
- 5 comments
Labels: writing/paper, essential-revision