Ecosyste.ms: Issues

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GitHub / xryanglab/RiboMiner issues and pull requests

#17 - hg38.longest.transcripts.info.txt error

Issue - State: closed - Opened by junjunlab 3 months ago - 6 comments

#16 - OutputTranscriptInfo function error

Issue - State: closed - Opened by junjunlab 3 months ago - 2 comments

#15 - Update Periodicity.py

Pull Request - State: closed - Opened by sherkinglee 9 months ago

#14 - Periodicity

Issue - State: closed - Opened by cmichellew 10 months ago - 2 comments
Labels: bug, help wanted

#13 - KeyError in OutputTranscriptInfo function

Issue - State: closed - Opened by chenghongdeng 10 months ago - 1 comment

#12 - PlotMetageneAnalysis for CDS and UTR for more than two groups

Issue - State: closed - Opened by nitishkumarmishra over 1 year ago - 1 comment

#11 - DuplicateHeaderException' from 'pyfasta' in prepare_transcripts

Issue - State: closed - Opened by nitishkumarmishra over 1 year ago - 5 comments

#10 - KeyError when running OutputTranscriptInfo

Issue - State: closed - Opened by yeroslaviz over 2 years ago - 1 comment

#9 - ribo density on each position or codons?

Issue - State: closed - Opened by junjunlab over 2 years ago - 2 comments

#8 - Metagene plot error!

Issue - State: closed - Opened by Raoyugithub almost 3 years ago - 10 comments
Labels: help wanted

#7 - RiboDensityAtEachPosition: coverage and density most of are 0

Issue - State: closed - Opened by junjunlab almost 3 years ago - 2 comments

#6 - Enrichment analysis for single transcript error

Issue - State: closed - Opened by junjunlab almost 3 years ago - 3 comments

#5 - Error in Periodicity

Issue - State: closed - Opened by lbwfff about 3 years ago - 2 comments

#4 - RiboMiner Polarity Calculation

Issue - State: closed - Opened by StevenWingett over 3 years ago - 2 comments

#3 - Sample Swapping with PolarityCalculation

Issue - State: closed - Opened by StevenWingett over 3 years ago - 4 comments
Labels: bug, help wanted

#2 - How do I export the read density for each bin in the function (MetageneAnalysisForTheWholeRegions)?

Issue - State: closed - Opened by cornecu over 3 years ago - 4 comments
Labels: enhancement

#1 - How to plot a individual transcript for reads densities ?

Issue - State: closed - Opened by junjunlab almost 4 years ago - 2 comments
Labels: enhancement