Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / wolberlab/dynophores issues and pull requests
#64 - Update package w.r.t. new black & pandas versions
Pull Request -
State: closed - Opened by dominiquesydow over 1 year ago
- 1 comment
#63 - Update GHA CI.yml file
Pull Request -
State: closed - Opened by dominiquesydow almost 2 years ago
- 1 comment
#62 - Update CI config file (use latest `cookiecutter-cms` template)
Issue -
State: open - Opened by dominiquesydow almost 2 years ago
#61 - Update CI schedule to Mondays 3 am UTC
Pull Request -
State: closed - Opened by dominiquesydow about 2 years ago
#60 - Pin `ipywidgets` < 8 to solve #59
Pull Request -
State: closed - Opened by dominiquesydow about 2 years ago
- 1 comment
#59 - Broken notebooks using ipywidget -> nglview (`AttributeError`)
Issue -
State: open - Opened by dominiquesydow about 2 years ago
#58 - Ignored linting errors for ipynb not ignored anymore (`flake8-nb`)
Issue -
State: closed - Opened by dominiquesydow about 2 years ago
- 1 comment
#57 - Fix docs CI
Pull Request -
State: closed - Opened by dominiquesydow over 2 years ago
- 1 comment
#56 - Trigger CI
Pull Request -
State: closed - Opened by dominiquesydow over 2 years ago
- 1 comment
#55 - Update install details with conda-forge channel
Pull Request -
State: closed - Opened by dominiquesydow almost 3 years ago
#54 - Installation docs assume conda-forge channel already in conda config
Issue -
State: closed - Opened by dominiquesydow almost 3 years ago
#53 - Add docs on how to save figures
Pull Request -
State: closed - Opened by dominiquesydow almost 3 years ago
- 1 comment
#52 - `seaborn` heatmaps not shown with `%matplotlib widget`
Issue -
State: open - Opened by dominiquesydow almost 3 years ago
- 1 comment
Labels: bug
#51 - Integrate dynophore generation and visualization
Pull Request -
State: open - Opened by dominiquesydow almost 3 years ago
Labels: enhancement
#50 - Input Data
Issue -
State: closed - Opened by hl2500 almost 3 years ago
- 2 comments
#49 - Upgrade codecov-action to v2
Pull Request -
State: closed - Opened by dominiquesydow about 3 years ago
- 1 comment
#48 - Link CodeCov to wolberlab/dynophores repo
Issue -
State: closed - Opened by dominiquesydow about 3 years ago
- 2 comments
#47 - Replace in GH URLs dominiquesydow with wolberlab
Pull Request -
State: closed - Opened by dominiquesydow about 3 years ago
#46 - Improve documentation
Pull Request -
State: closed - Opened by dominiquesydow about 3 years ago
- 1 comment
#45 - Move repo to wolberlab organization
Issue -
State: closed - Opened by dominiquesydow about 3 years ago
#44 - NGLview: Check type for sphere center
Issue -
State: closed - Opened by dominiquesydow about 3 years ago
- 1 comment
#43 - Fix CLI usage in docs
Pull Request -
State: closed - Opened by dominiquesydow about 3 years ago
- 1 comment
#42 - Update user guide in docs
Pull Request -
State: closed - Opened by dominiquesydow about 3 years ago
#41 - Docker container for dynophores?
Issue -
State: open - Opened by cap-jmk about 3 years ago
- 6 comments
Labels: enhancement
#40 - Update documentation
Issue -
State: open - Opened by dominiquesydow about 3 years ago
Labels: documentation
#39 - Update dyno notebook
Pull Request -
State: closed - Opened by dominiquesydow about 3 years ago
- 2 comments
#38 - More documention in dynophore Jupyter notebook
Issue -
State: closed - Opened by dominiquesydow about 3 years ago
#37 - Enable CLI tests in CI
Issue -
State: closed - Opened by dominiquesydow about 3 years ago
- 1 comment
Labels: question
#36 - Collapse envpartners with same residue and superfeature
Pull Request -
State: closed - Opened by dominiquesydow about 3 years ago
- 2 comments
Labels: enhancement
#35 - Distance plots: Show interaction-relevant distances
Pull Request -
State: closed - Opened by dominiquesydow about 3 years ago
- 2 comments
#34 - Prettify notebook plots
Issue -
State: open - Opened by dominiquesydow about 3 years ago
Labels: question
#33 - Fix interactive widgets
Pull Request -
State: closed - Opened by dominiquesydow about 3 years ago
- 2 comments
#32 - Color clouds by frame
Pull Request -
State: closed - Opened by dominiquesydow over 3 years ago
- 2 comments
#31 - Simplify rdkit molecule generation for ligand
Pull Request -
State: closed - Opened by dominiquesydow over 3 years ago
- 2 comments
#30 - Plots: Collapse all feature per envpartner
Issue -
State: closed - Opened by dominiquesydow over 3 years ago
Labels: enhancement
#29 - Plots notebook: Save widget state
Pull Request -
State: closed - Opened by dominiquesydow over 3 years ago
- 2 comments
#28 - Extend NGL dynophore visualization
Pull Request -
State: closed - Opened by dominiquesydow over 3 years ago
- 2 comments
#27 - Dynophore 3D viz: NGL PointBuffer artifacts
Issue -
State: open - Opened by dominiquesydow over 3 years ago
- 1 comment
Labels: enhancement
#26 - Move to JupyterLab 3
Issue -
State: closed - Opened by dominiquesydow over 3 years ago
#25 - Open tech tasks for v1.0.0
Issue -
State: open - Opened by dominiquesydow over 3 years ago
#24 - Improve 2D ligand view
Issue -
State: open - Opened by dominiquesydow over 3 years ago
- 1 comment
Labels: enhancement
#23 - Use plt.eventplot for superfeature/envpartner occurrences
Pull Request -
State: closed - Opened by dominiquesydow over 3 years ago
- 1 comment
#22 - Replace hardcoded feature colors with superfeature color attribute
Pull Request -
State: closed - Opened by dominiquesydow over 3 years ago
#21 - Update core classes w.r.t. dynophore 0.2 output
Pull Request -
State: closed - Opened by dominiquesydow over 3 years ago
- 1 comment
#20 - Visualisation with d3.js
Pull Request -
State: closed - Opened by nadja-mansurov over 3 years ago
- 5 comments
#19 - Extend cloud information
Pull Request -
State: closed - Opened by dominiquesydow over 3 years ago
- 2 comments
#18 - Add dependency to env variables
Pull Request -
State: closed - Opened by nadja-mansurov over 3 years ago
- 9 comments
#17 - Add ligand 2D view
Pull Request -
State: closed - Opened by dominiquesydow over 3 years ago
- 4 comments
#16 - Add instruction for failed pip-installation
Pull Request -
State: closed - Opened by nadja-mansurov over 3 years ago
- 8 comments
#15 - Optimize plotting (i.e. core classes)
Pull Request -
State: closed - Opened by dominiquesydow over 3 years ago
- 2 comments
#14 - Simplify input
Pull Request -
State: closed - Opened by dominiquesydow over 3 years ago
- 1 comment
#13 - Extend CLI with `dynoviz demo`
Pull Request -
State: closed - Opened by dominiquesydow over 3 years ago
- 1 comment
#12 - Read dynophores from JSON (will become default)
Pull Request -
State: closed - Opened by dominiquesydow over 3 years ago
- 1 comment
#11 - Allow deprecated DynophoreApp file structure + enhance plotting
Pull Request -
State: closed - Opened by dominiquesydow over 3 years ago
- 2 comments
#10 - Add user notebook to package (not only docs)
Pull Request -
State: closed - Opened by dominiquesydow over 3 years ago
- 2 comments
#9 - Correct installation steps in docs
Pull Request -
State: closed - Opened by dominiquesydow over 3 years ago
#8 - Open tasks for v1.0.0
Issue -
State: closed - Opened by dominiquesydow over 3 years ago
- 5 comments
#7 - Add CLI
Pull Request -
State: closed - Opened by dominiquesydow over 3 years ago
- 2 comments
#6 - Enable dynophores.readthedocs.io
Pull Request -
State: closed - Opened by dominiquesydow over 3 years ago
#5 - Add tutorials/docs + interactive plots + 3D visualization
Pull Request -
State: closed - Opened by dominiquesydow over 3 years ago
- 2 comments
#4 - Refactor code and add unit tests
Pull Request -
State: closed - Opened by dominiquesydow over 3 years ago
- 1 comment
#3 - Set up CI
Pull Request -
State: closed - Opened by dominiquesydow over 3 years ago
- 1 comment
#2 - Add webapp module
Pull Request -
State: closed - Opened by dominiquesydow about 4 years ago
- 1 comment
#1 - Add module skeleton
Pull Request -
State: closed - Opened by dominiquesydow about 4 years ago
- 1 comment