Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / wellcometrust/WellcomeML issues and pull requests

#386 - Feature/nice heatmap

Pull Request - State: closed - Opened by aCampello about 2 years ago - 2 comments

#385 - Release 2.0.3

Pull Request - State: closed - Opened by nsorros over 2 years ago

#384 - Unpin tokenizers to update transformers

Pull Request - State: closed - Opened by nsorros over 2 years ago - 1 comment

#380 - Release 2.0.2

Pull Request - State: closed - Opened by aCampello over 2 years ago

#379 - Move flake8 and black to tests

Pull Request - State: closed - Opened by aCampello over 2 years ago - 1 comment

#377 - Release 2.0.1

Pull Request - State: closed - Opened by aCampello over 2 years ago - 2 comments

#374 - Release 2.0.0

Pull Request - State: closed - Opened by nsorros over 2 years ago - 3 comments

#372 - Breakdown extras

Pull Request - State: closed - Opened by aCampello over 2 years ago - 5 comments

#371 - Feature/delete init

Pull Request - State: closed - Opened by aCampello over 2 years ago - 2 comments

#368 - Expand LOGGING_LEVEL to cpp tensorflow logger

Pull Request - State: closed - Opened by nsorros over 2 years ago
Labels: Hacktoberfest

#367 - Add Windows tests in travis

Pull Request - State: closed - Opened by nsorros over 2 years ago - 3 comments

#365 - Investigate why codecov breaks

Pull Request - State: closed - Opened by nsorros over 2 years ago - 2 comments

#364 - Fix write_jsonl docstring to call for list of dicts

Pull Request - State: closed - Opened by nsorros over 2 years ago - 2 comments

#363 - Replace trello with Notion in PR template

Pull Request - State: closed - Opened by nsorros over 2 years ago - 1 comment

#362 - Add use_gpu flag to CNN

Pull Request - State: closed - Opened by nsorros over 2 years ago

#359 - Loosen numpy to version tensorflow 2.4.0 asks

Pull Request - State: closed - Opened by nsorros over 2 years ago - 3 comments

#358 - Do not initialize model if it exists in CNN

Pull Request - State: closed - Opened by nsorros over 2 years ago - 2 comments

#357 - Pin sent2vec

Pull Request - State: closed - Opened by aCampello over 2 years ago - 2 comments

#355 - Bump numpy

Pull Request - State: closed - Opened by aCampello almost 3 years ago - 1 comment

#351 - Feature/viz as extra

Pull Request - State: closed - Opened by aCampello almost 3 years ago - 1 comment

#350 - add filter button

Pull Request - State: closed - Opened by federikovi almost 3 years ago - 1 comment

#349 - Change version file

Pull Request - State: closed - Opened by aCampello almost 3 years ago - 1 comment

#348 - Add legend

Pull Request - State: closed - Opened by federikovi almost 3 years ago - 1 comment

#347 - Update viz function

Pull Request - State: closed - Opened by federikovi almost 3 years ago - 1 comment

#346 - Fix/tf idf fit transform

Pull Request - State: closed - Opened by aCampello almost 3 years ago - 10 comments

#341 - Add tokenize to KerasTokenizer

Pull Request - State: closed - Opened by nsorros almost 3 years ago - 1 comment

#337 - Pin spacy to 3.0.6

Pull Request - State: closed - Opened by aCampello almost 3 years ago - 4 comments

#336 - Fix/remove datalabs

Pull Request - State: closed - Opened by aCampello almost 3 years ago - 1 comment

#334 - Release 1.2.0

Pull Request - State: closed - Opened by nsorros almost 3 years ago - 2 comments

#333 - Refactor CNN and BiLSTM to BaseNN

Pull Request - State: closed - Opened by nsorros almost 3 years ago - 4 comments

#332 - Feature/visualisation

Pull Request - State: closed - Opened by aCampello almost 3 years ago - 3 comments

#331 - Add small test for clustering

Pull Request - State: closed - Opened by aCampello almost 3 years ago - 2 comments

#329 - create example for visualize_clusters function

Pull Request - State: closed - Opened by federikovi almost 3 years ago - 1 comment

#327 - Add tensorboard_log_path and verbose param to CNN

Pull Request - State: closed - Opened by nsorros almost 3 years ago - 2 comments

#322 - Feature/federica/cluster viz

Pull Request - State: closed - Opened by federikovi almost 3 years ago - 1 comment
Labels: viz

#319 - Fix flake8 action

Pull Request - State: closed - Opened by nsorros almost 3 years ago - 1 comment
Labels: bug

#318 - Implement multilabel attention in CNN

Pull Request - State: closed - Opened by nsorros almost 3 years ago - 9 comments
Labels: enhancement

#315 - Extend tokenizers to accomodate shap text explainer

Pull Request - State: closed - Opened by nsorros almost 3 years ago - 2 comments
Labels: enhancement

#313 - Fix concat feature approach in CNN

Pull Request - State: closed - Opened by nsorros almost 3 years ago - 1 comment
Labels: bug

#312 - Add pip freeze after tox so we can see all dependencies installed by tox

Pull Request - State: closed - Opened by aCampello almost 3 years ago - 1 comment

#308 - Add EPMC client

Pull Request - State: closed - Opened by nsorros almost 3 years ago - 6 comments

#307 - Create plot.py

Pull Request - State: closed - Opened by federikovi about 3 years ago - 3 comments
Labels: viz

#306 - DS-2 Feature/extras

Pull Request - State: closed - Opened by aCampello about 3 years ago - 4 comments

#302 - Add a Windows specific Makefile and some instructions

Pull Request - State: closed - Opened by SamDepardieu about 3 years ago - 6 comments
Labels: enhancement

#301 - Add github action to run tox

Pull Request - State: closed - Opened by nsorros about 3 years ago - 9 comments

#299 - DS-52 Feature/new clustering docs

Pull Request - State: closed - Opened by aCampello about 3 years ago - 1 comment

#297 - Fix OOM error during CNN predict

Pull Request - State: closed - Opened by nsorros about 3 years ago - 7 comments

#292 - DS-44 Fix/clustering pipeline

Pull Request - State: closed - Opened by aCampello about 3 years ago

#289 - Use scipy's save by default

Pull Request - State: closed - Opened by aCampello about 3 years ago - 1 comment

#286 - DS-2 Add spacy as extra

Pull Request - State: closed - Opened by aCampello about 3 years ago

#283 - Import umap during init and if needed

Pull Request - State: closed - Opened by nsorros about 3 years ago - 3 comments

#279 - Extend logger to more external libraries

Pull Request - State: closed - Opened by nsorros about 3 years ago - 1 comment

#278 - Release 1.1.0

Pull Request - State: closed - Opened by aCampello about 3 years ago - 6 comments

#277 - Release 1.1.0

Pull Request - State: closed - Opened by aCampello about 3 years ago

#276 - Feature/clustering improvements

Pull Request - State: closed - Opened by aCampello about 3 years ago - 3 comments

#275 - Fix flake8 action and other instances of 'master' instead of 'main'

Pull Request - State: closed - Opened by aCampello about 3 years ago - 3 comments

#273 - Feature/speed up tests

Pull Request - State: closed - Opened by aCampello about 3 years ago - 23 comments

#272 - Spacy lemmatizer to use blank model

Pull Request - State: closed - Opened by lizgzil about 3 years ago - 8 comments

#269 - Enable tagger which is necessary on V3

Pull Request - State: closed - Opened by aCampello over 3 years ago - 3 comments

#267 - Fix Doc2VecVectorizer tests

Pull Request - State: closed - Opened by nsorros over 3 years ago

#262 - Add debug stack trace in wellcome/ml.__init__

Pull Request - State: closed - Opened by nsorros over 3 years ago - 3 comments

#260 - Update gitignore to ignore tox and pyenv local version

Pull Request - State: closed - Opened by nsorros over 3 years ago - 3 comments

#255 - Improve memory efficiency of TransformersTokenizer by buffering encodings

Pull Request - State: closed - Opened by nsorros over 3 years ago - 4 comments
Labels: enhancement

#252 - Update make test to use tox

Pull Request - State: closed - Opened by nsorros over 3 years ago - 8 comments

#250 - Test codecov

Pull Request - State: closed - Opened by nsorros over 3 years ago - 2 comments

#249 - Upgrade docs

Pull Request - State: closed - Opened by aCampello over 3 years ago - 1 comment

#246 - Use tox for tests

Pull Request - State: closed - Opened by nsorros over 3 years ago - 6 comments
Labels: enhancement

#245 - VotingClassifier extras

Pull Request - State: closed - Opened by lizgzil over 3 years ago - 11 comments

#244 - Loosen spacy requirements to less than 3.1.0 and more than 3.0.0

Pull Request - State: closed - Opened by nsorros over 3 years ago

#242 - Feature/examples/semantic example

Pull Request - State: closed - Opened by aCampello over 3 years ago

#240 - Feature/antonio/multi gpu bert equivalence

Pull Request - State: closed - Opened by aCampello over 3 years ago - 1 comment

#237 - Fix keras vectorizer by inferring sequence length from data

Pull Request - State: closed - Opened by nsorros over 3 years ago - 1 comment

#235 - Release 1.0.2

Pull Request - State: closed - Opened by aCampello over 3 years ago - 2 comments

#233 - Fix CNN predict when X tf.data.Dataset

Pull Request - State: closed - Opened by nsorros over 3 years ago - 1 comment

#231 - Release 1.0.1

Pull Request - State: closed - Opened by aCampello over 3 years ago - 10 comments

#229 - Silence tensorflow in travis logs

Pull Request - State: closed - Opened by nsorros over 3 years ago - 1 comment

#228 - Pin dev python version to 3.8

Pull Request - State: closed - Opened by nsorros over 3 years ago - 12 comments

#227 - Fix flake8 action

Pull Request - State: closed - Opened by nsorros over 3 years ago

#226 - Fix BertClassifier load

Pull Request - State: closed - Opened by nsorros over 3 years ago

#219 - Fix error caught when hdbscan is missing

Pull Request - State: closed - Opened by nsorros over 3 years ago

#218 - fix: typo

Pull Request - State: closed - Opened by ivyleavedtoadflax over 3 years ago - 2 comments

#216 - Multi gpu for bert equivalence

Pull Request - State: closed - Opened by nsorros over 3 years ago - 1 comment

#214 - Feature/configurable logger

Pull Request - State: closed - Opened by aCampello over 3 years ago - 1 comment

#211 - Fix/semantic similarity predict

Pull Request - State: closed - Opened by aCampello over 3 years ago

#208 - Enable multi gpu setup when more than one GPUs

Pull Request - State: closed - Opened by nsorros over 3 years ago - 9 comments

#205 - Fix version to latest version on PyPi

Pull Request - State: closed - Opened by nsorros over 3 years ago - 3 comments

#204 - Efficient CNN

Pull Request - State: closed - Opened by nsorros over 3 years ago - 2 comments

#203 - Add flag and warning for when hdbscan not installed

Pull Request - State: closed - Opened by nsorros over 3 years ago - 2 comments

#201 - Release 2021.2.0

Pull Request - State: closed - Opened by aCampello over 3 years ago

#199 - Investigate travis build

Pull Request - State: closed - Opened by nsorros over 3 years ago - 2 comments

#196 - Disable HDBscan to resolve C header issue temporarily

Pull Request - State: closed - Opened by nsorros over 3 years ago - 3 comments

#194 - Fix pip dependency resolver

Pull Request - State: closed - Opened by nsorros over 3 years ago - 4 comments

#193 - Adds TransformersTokenizer

Pull Request - State: closed - Opened by nsorros over 3 years ago - 2 comments

#191 - Rewrite BertClassifier using transformers

Pull Request - State: closed - Opened by nsorros over 3 years ago - 2 comments

#184 - Upgrade spacy v3

Pull Request - State: closed - Opened by nsorros over 3 years ago - 5 comments

#170 - Multi gpu predict

Pull Request - State: closed - Opened by nsorros over 3 years ago - 4 comments

#169 - Enable snapshot ensemble

Pull Request - State: closed - Opened by nsorros over 3 years ago - 1 comment

#165 - Investigate test fail

Pull Request - State: closed - Opened by nsorros over 3 years ago - 1 comment

#164 - Temp release 2020.9.2

Pull Request - State: closed - Opened by nsorros over 3 years ago

#152 - BiLSTM and CNN now accept X, Y to be lists

Pull Request - State: closed - Opened by Xx-Ashutosh-xX almost 4 years ago - 2 comments