Ecosyste.ms: Issues

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GitHub / weecology/Metabarcoding issues and pull requests

#36 - update Rmd file to github doc for easier viewing

Pull Request - State: closed - Opened by bleds22e almost 4 years ago
Labels: hacktoberfest-accepted

#35 - plants by treatment markdown file

Pull Request - State: closed - Opened by bleds22e almost 4 years ago
Labels: hacktoberfest-accepted

#34 - Split 2017 data

Pull Request - State: closed - Opened by bleds22e about 4 years ago

#33 - trnL files with same structure

Pull Request - State: closed - Opened by bleds22e almost 5 years ago

#32 - Finding trnL plant vouchers

Pull Request - State: closed - Opened by bleds22e almost 5 years ago

#31 - [WIP] Making OTU library key

Pull Request - State: closed - Opened by bleds22e almost 5 years ago

#30 - update vial_id csv

Pull Request - State: closed - Opened by bleds22e almost 5 years ago

#29 - Restructure repo

Pull Request - State: closed - Opened by bleds22e almost 5 years ago

#28 - trnL fecal data in proportions

Pull Request - State: closed - Opened by bleds22e about 7 years ago

#27 - add total reads to voucher collection file

Pull Request - State: closed - Opened by skmorgane about 7 years ago

#26 - Merge millet OTU info into vouchers

Issue - State: open - Opened by skmorgane about 7 years ago

#25 - Convert voucher data to raw reads

Issue - State: closed - Opened by skmorgane about 7 years ago - 2 comments

#24 - Format fecal data to relative reads

Issue - State: open - Opened by skmorgane about 7 years ago

#23 - [WIP] Standardize plant names

Pull Request - State: open - Opened by bleds22e about 7 years ago

#22 - Clean plant taxonomy

Issue - State: open - Opened by bleds22e over 7 years ago

#21 - fix hard file paths for plant_species_master_list.R

Pull Request - State: closed - Opened by bleds22e over 7 years ago

#20 - Should we keep the original files they send us somewhere?

Issue - State: closed - Opened by bleds22e over 7 years ago - 1 comment

#19 - Keep trnL blast info and remove old plant folder

Pull Request - State: closed - Opened by bleds22e over 7 years ago

#18 - Reads vs. proportions

Issue - State: closed - Opened by bleds22e over 7 years ago - 1 comment

#17 - Prune finished branches

Issue - State: closed - Opened by skmorgane over 7 years ago - 2 comments

#16 - Load Portal plant list from repo?

Issue - State: closed - Opened by skmorgane over 7 years ago

#15 - Remove hard paths

Issue - State: open - Opened by skmorgane over 7 years ago - 6 comments

#14 - Create ITS OTU pipeline

Issue - State: open - Opened by skmorgane over 7 years ago - 1 comment

#13 - Trap and bait test

Pull Request - State: closed - Opened by bleds22e over 7 years ago

#12 - Its re blast

Pull Request - State: closed - Opened by bleds22e over 7 years ago

#11 - Master of plants

Pull Request - State: closed - Opened by bleds22e over 7 years ago - 1 comment

#10 - Clean/dirty millet/oatmeal data

Issue - State: closed - Opened by bleds22e over 7 years ago

#9 - Put newly formed data files into "SequencedData" folder

Pull Request - State: closed - Opened by bleds22e over 7 years ago - 2 comments

#8 - General Metabarcoding Tutoring

Issue - State: open - Opened by skmorgane over 7 years ago

#7 - Loop in Data Analyst

Issue - State: closed - Opened by skmorgane over 7 years ago - 1 comment

#6 - Create ITS OTU-Taxon linker

Issue - State: open - Opened by skmorgane over 7 years ago

#5 - Check ITS Taxon data

Issue - State: open - Opened by skmorgane over 7 years ago

#4 - Metabarcoding Database Creation

Issue - State: closed - Opened by skmorgane over 7 years ago - 2 comments

#3 - Create Master of all Master Plant Species Lists

Issue - State: closed - Opened by skmorgane over 7 years ago - 1 comment

#2 - ITS Plant Coverage

Issue - State: open - Opened by skmorgane over 7 years ago

#1 - TrnL Plant Coverage

Issue - State: open - Opened by skmorgane over 7 years ago