Ecosyste.ms: Issues

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GitHub / weecology/EvergladesSpeciesModel issues and pull requests

#42 - Try new run with hand picked empty frames

Issue - State: open - Opened by ethanwhite about 1 year ago

#41 - Add data visualization code, data, and results

Pull Request - State: closed - Opened by ethanwhite over 1 year ago

#40 - Shrink bounding boxes for smaller species & increase NMS threshold

Pull Request - State: closed - Opened by ethanwhite over 1 year ago - 1 comment

#38 - Handle "Unknown White" labels in species evaluation

Issue - State: closed - Opened by ethanwhite over 1 year ago - 1 comment

#37 - Fix unlabeled point in cleaned test set

Issue - State: open - Opened by ethanwhite over 1 year ago

#36 - Great Blue Heron off nests

Issue - State: open - Opened by bw4sz over 1 year ago

#35 - Save output in same location as model

Pull Request - State: closed - Opened by ethanwhite almost 2 years ago

#34 - Save evaluation output in correct location

Pull Request - State: closed - Opened by ethanwhite almost 2 years ago - 1 comment

#33 - Evaluation code erroring before producing output files

Issue - State: closed - Opened by ethanwhite almost 2 years ago

#32 - No longer generating confusion matrices

Issue - State: closed - Opened by ethanwhite almost 2 years ago

#31 - Merge experiments into main

Pull Request - State: closed - Opened by bw4sz about 2 years ago - 2 comments

#30 - Do we need to be training on full size images?

Issue - State: open - Opened by bw4sz about 2 years ago

#29 - Use currated empty frames in separate directories

Pull Request - State: closed - Opened by ethanwhite over 2 years ago

#28 - Add some white cypress empty frames

Issue - State: open - Opened by ethanwhite over 2 years ago

#27 - Store predictions on the test data for later analysis

Pull Request - State: closed - Opened by ethanwhite over 2 years ago

#26 - Refactor to support experimentation

Pull Request - State: closed - Opened by ethanwhite almost 3 years ago - 1 comment

#25 - zoom augmentation

Issue - State: open - Opened by bw4sz almost 3 years ago

#24 - Empty frame detection

Issue - State: open - Opened by bw4sz almost 3 years ago - 2 comments

#23 - Allow one vs all classifiers

Pull Request - State: closed - Opened by ethanwhite almost 3 years ago

#22 - Add support for weighted sampling to address class imbalance

Pull Request - State: closed - Opened by ethanwhite almost 3 years ago - 1 comment

#21 - revisit imbalance sampling

Issue - State: closed - Opened by bw4sz almost 3 years ago - 1 comment

#20 - Use global bird detector as pretraining for species model

Pull Request - State: closed - Opened by ethanwhite about 3 years ago

#19 - Start from global bird detector + empty frames

Pull Request - State: closed - Opened by ethanwhite about 3 years ago

#18 - expand the bounding box slightly.

Issue - State: closed - Opened by bw4sz about 3 years ago - 5 comments

#17 - label autoencoder for outlier detection on the training set

Issue - State: open - Opened by bw4sz about 3 years ago

#16 - temporal species prediction for bird bird bird

Issue - State: open - Opened by bw4sz about 3 years ago

#15 - site specific metadata

Issue - State: open - Opened by bw4sz about 3 years ago

#14 - balance dataset

Issue - State: open - Opened by bw4sz about 3 years ago - 4 comments

#13 - Clean test set for species model

Issue - State: closed - Opened by ethanwhite about 3 years ago - 1 comment

#12 - Create a cleaned test data

Issue - State: closed - Opened by bw4sz about 3 years ago

#11 - Neighbor attention network.

Issue - State: closed - Opened by bw4sz about 3 years ago

#10 - Global view during species classfication

Issue - State: open - Opened by bw4sz about 3 years ago

#9 - Confusion visualization

Pull Request - State: closed - Opened by ethanwhite about 3 years ago

#8 - Add script for running experiments using SLURM

Pull Request - State: closed - Opened by ethanwhite about 3 years ago

#7 - Add script for starting experiments using SLURM

Pull Request - State: closed - Opened by ethanwhite about 3 years ago

#6 - Directly convert predicted labels using label_dict

Pull Request - State: closed - Opened by ethanwhite about 3 years ago

#5 - Don't convert predictions to categories using numpy

Pull Request - State: closed - Opened by ethanwhite about 3 years ago

#4 - Fix confusion matrix

Pull Request - State: closed - Opened by ethanwhite about 3 years ago

#3 - Make conda install more robust

Pull Request - State: closed - Opened by ethanwhite about 3 years ago

#2 - Make conda install more robust

Pull Request - State: closed - Opened by ethanwhite about 3 years ago

#1 - Make conda install more robust

Pull Request - State: closed - Opened by ethanwhite about 3 years ago