Ecosyste.ms: Issues

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GitHub / weecology/DeepForest issues and pull requests

#334 - Has anyone tried to run Deepforest on Torchserve?

Issue - State: closed - Opened by jeroenVerdonschot over 2 years ago - 4 comments
Labels: enhancement

#333 - Model Checkpointing

Issue - State: closed - Opened by nilsleh over 2 years ago - 4 comments

#332 - IoU Evaluation Default Value

Issue - State: closed - Opened by nilsleh over 2 years ago - 2 comments

#330 - Resample image and evaluating them accordingly

Pull Request - State: closed - Opened by dassaniansh over 2 years ago - 2 comments

#329 - Adding image path, Fixes #328

Pull Request - State: closed - Opened by dassaniansh over 2 years ago - 3 comments

#328 - predict_image does not return image_path within the dataframe

Issue - State: closed - Opened by dassaniansh over 2 years ago - 2 comments

#327 - Dependency Errors

Issue - State: closed - Opened by devinmk over 2 years ago

#326 - Best way to do augmentations

Issue - State: closed - Opened by mjb-oz over 2 years ago - 8 comments

#325 - freeze backbone layers to do transfer learning?

Issue - State: closed - Opened by easz over 2 years ago - 5 comments

#324 - How to use my own trained model for conducting inference?

Issue - State: closed - Opened by landkwon94 over 2 years ago - 1 comment

#323 - GitHub Actions tests failing on Ubuntu due to issue with conda setup

Issue - State: closed - Opened by ethanwhite over 2 years ago - 3 comments

#322 - Model according to freezeing regression head

Pull Request - State: closed - Opened by dassaniansh over 2 years ago

#321 - Ask user if they want to download the latest model.

Issue - State: open - Opened by bw4sz over 2 years ago - 8 comments
Labels: good first issue

#320 - Create a workflow for downstream classification of crops.

Issue - State: open - Opened by bw4sz over 2 years ago - 1 comment
Labels: Machine Learning

#319 - Documentation and functions should be more inclusive to other languages

Issue - State: open - Opened by bw4sz over 2 years ago - 2 comments
Labels: help wanted

#318 - Model should be less sensitive to resolution

Issue - State: open - Opened by bw4sz over 2 years ago - 6 comments
Labels: help wanted, Machine Learning

#317 - Model library

Issue - State: open - Opened by bw4sz over 2 years ago - 5 comments
Labels: dependencies, Docs, API

#316 - Allow users to make a new classification model using existing regression head

Issue - State: closed - Opened by bw4sz over 2 years ago - 7 comments
Labels: help wanted

#315 - Clarify that input data is in RGB

Pull Request - State: closed - Opened by ethanwhite over 2 years ago - 2 comments

#314 - Return actual labels (not numeric codes) in predictions

Pull Request - State: closed - Opened by ethanwhite over 2 years ago - 5 comments

#313 - Issue in model traning in custom dataset KeyError: 'tree'

Issue - State: closed - Opened by sachin22225 over 2 years ago - 2 comments

#312 - Predict a single image

Issue - State: closed - Opened by Kikihqq over 2 years ago

#311 - Can not process GeoTIFF

Issue - State: closed - Opened by elock4567 almost 3 years ago - 2 comments

#310 - Error 'preload_images' when training model

Issue - State: closed - Opened by JoelMet almost 3 years ago - 8 comments

#309 - Saving/loading trained model issue

Issue - State: closed - Opened by liliana175 almost 3 years ago - 3 comments
Labels: wontfix

#308 - C

Issue - State: closed - Opened by urgis-git almost 3 years ago

#307 - Add conda/mamba install instructions

Pull Request - State: closed - Opened by ethanwhite almost 3 years ago

#306 - confusing document about image convention

Issue - State: closed - Opened by easz almost 3 years ago

#305 - Improve conftest

Pull Request - State: closed - Opened by bw4sz almost 3 years ago - 6 comments

#304 - add min pytorch-lightning version to allow checkpoint override

Pull Request - State: closed - Opened by bw4sz almost 3 years ago - 2 comments

#303 - DeepForest showcase in the EnvDS book

Issue - State: closed - Opened by acocac almost 3 years ago

#302 - add missing config variables

Pull Request - State: closed - Opened by easz almost 3 years ago - 3 comments

#301 - remove checkpoint_callback=False to be able to set up checkpointing

Issue - State: closed - Opened by easz almost 3 years ago - 4 comments

#300 - missing variables in DeepForest/deepforest/data/deepforest_config.yml

Issue - State: closed - Opened by saadmazouzi almost 3 years ago - 3 comments

#299 - fixed basename extraction

Pull Request - State: closed - Opened by easz almost 3 years ago

#298 - remove hard-coded checkpoint_callback flag

Pull Request - State: closed - Opened by easz almost 3 years ago - 2 comments

#297 - Are there any species annotation data available in the NEON Crowns dataset?

Issue - State: closed - Opened by EdwardHiscoke almost 3 years ago - 2 comments

#296 - Will unannotated trees impact training?

Issue - State: closed - Opened by EdwardHiscoke almost 3 years ago - 3 comments

#295 - num_classes usage is not consistent with torhcvision's doc

Issue - State: closed - Opened by easz almost 3 years ago - 1 comment

#294 - fixed basename extraction

Pull Request - State: closed - Opened by easz almost 3 years ago - 1 comment

#293 - No predication can be made after training

Issue - State: closed - Opened by easz almost 3 years ago - 3 comments

#292 - save hyperparams to allow clean multi-class model reload, closes #287

Pull Request - State: closed - Opened by bw4sz almost 3 years ago - 1 comment

#291 - suggestion on training large dataset regarding to insufficient GPU memory

Issue - State: closed - Opened by easz almost 3 years ago - 3 comments

#290 - Initial model to load for multi-class training

Issue - State: closed - Opened by pbugnet almost 3 years ago - 8 comments

#289 - Update main.py

Pull Request - State: closed - Opened by cbudac-fwig almost 3 years ago - 1 comment

#288 - new conda package for the latest version of deepforest

Issue - State: closed - Opened by easz almost 3 years ago - 11 comments
Labels: question, installation

#287 - Improve multi-class model reloading

Issue - State: closed - Opened by bw4sz almost 3 years ago - 4 comments

#286 - GPU detected but not usedf despite setting on model for training

Issue - State: closed - Opened by Ciaran1981 almost 3 years ago - 8 comments

#285 - allow a user to output the original crops and predictions from predict tile

Pull Request - State: closed - Opened by bw4sz almost 3 years ago

#284 - Make config file path customizable

Pull Request - State: closed - Opened by ethanwhite almost 3 years ago - 1 comment

#283 - Pass config path into constructor

Issue - State: closed - Opened by a-orn almost 3 years ago - 3 comments

#282 - Getting issue while importing main from deepforest

Issue - State: closed - Opened by PravinM83 almost 3 years ago - 6 comments

#280 - Warnings about "Image type is {}" and "torch.meshgrid: in an upcoming release"

Issue - State: closed - Opened by EdwardHiscoke almost 3 years ago - 2 comments

#279 - add on epoch end val metric

Pull Request - State: closed - Opened by bw4sz almost 3 years ago - 4 comments

#278 - Are weights updated here?

Issue - State: closed - Opened by bw4sz almost 3 years ago - 1 comment

#277 - DeepForest or DeepTreeAttention

Issue - State: closed - Opened by EdwardHiscoke almost 3 years ago - 1 comment

#276 - Retraining for other resolutions. Which resolutions will work?

Issue - State: closed - Opened by EdwardHiscoke almost 3 years ago - 7 comments

#275 - Retraining: transfer learning or from scratch?

Issue - State: closed - Opened by EdwardHiscoke almost 3 years ago - 3 comments

#274 - preload images to dataset, closes #272

Pull Request - State: closed - Opened by bw4sz almost 3 years ago

#273 - Add in-training reporting of micro and macro F1

Issue - State: closed - Opened by ethanwhite almost 3 years ago

#272 - Allow pin to memory

Issue - State: closed - Opened by bw4sz almost 3 years ago

#271 - What loss functions are used in DeepForest?

Issue - State: closed - Opened by landkwon94 almost 3 years ago - 3 comments

#270 - small docs spell fix

Pull Request - State: closed - Opened by davidnyberg almost 3 years ago - 1 comment

#269 - Train at multiple levels of backbone resnet blocks

Issue - State: closed - Opened by bw4sz about 3 years ago

#268 - Improve image dtype warnings

Pull Request - State: closed - Opened by ethanwhite about 3 years ago

#267 - USe docutils<0.18 due to backward compatibility

Pull Request - State: closed - Opened by henrykironde about 3 years ago

#266 - add seperate val albumentations transform

Pull Request - State: closed - Opened by bw4sz about 3 years ago

#265 - add bbox transform for val dataset

Pull Request - State: closed - Opened by bw4sz about 3 years ago

#264 - Update badge url

Pull Request - State: closed - Opened by henrykironde about 3 years ago

#263 - Export predictions for detailed analysis

Pull Request - State: closed - Opened by ethanwhite about 3 years ago - 1 comment

#262 - Multi-class classification model training issue

Issue - State: closed - Opened by nikiemapp about 3 years ago - 4 comments

#261 - Albumentations dependency issue

Issue - State: closed - Opened by ethanwhite about 3 years ago

#260 - TIF / CSV file? Which one should I input to predict a single image?

Issue - State: closed - Opened by philipperemy about 3 years ago - 3 comments

#259 - Visualizations of Predictions for entire image

Issue - State: closed - Opened by PravinM83 about 3 years ago - 4 comments

#258 - Fail to use validation dataset while training

Issue - State: closed - Opened by sharonorbica about 3 years ago - 3 comments

#257 - Use latest sphinx

Pull Request - State: closed - Opened by henrykironde about 3 years ago - 2 comments

#256 - Add documentation for deepforestr

Pull Request - State: closed - Opened by henrykironde about 3 years ago - 1 comment

#255 - ValueError: Caught ValueError in DataLoader worker process 0.

Issue - State: closed - Opened by PravinM83 about 3 years ago - 4 comments

#254 - [TEST]: Update README.md

Pull Request - State: closed - Opened by henrykironde about 3 years ago

#253 - predicted boxes to geopandas dataframe(UTM coordinate value)

Issue - State: closed - Opened by spermking93 about 3 years ago - 2 comments

#252 - Getting Started (no plot?)

Issue - State: closed - Opened by brentwilder about 3 years ago - 3 comments

#251 - To save the model trained by ourselves

Issue - State: closed - Opened by XUYIRS about 3 years ago - 2 comments

#250 - improve project_boxes

Issue - State: closed - Opened by sdtaylor about 3 years ago - 3 comments

#249 - Bounding boxes on the edges of tiles

Issue - State: closed - Opened by janjatovic about 3 years ago - 2 comments
Labels: question

#248 - Fix typos in project_boxes docstring

Pull Request - State: closed - Opened by ethanwhite about 3 years ago

#247 - Georeferencing issue

Issue - State: closed - Opened by NicolasBarbier1 about 3 years ago - 3 comments
Labels: stale

#246 - Add documentation for deepforestr

Pull Request - State: closed - Opened by ethanwhite about 3 years ago - 2 comments
Labels: test&review

#245 - Fix typos in getting started doc

Pull Request - State: closed - Opened by ethanwhite about 3 years ago

#244 - Getting error while using >> my_model.use_release()

Issue - State: closed - Opened by PravinM83 over 3 years ago - 2 comments
Labels: tensorflow

#243 - Negative Samples error

Issue - State: closed - Opened by sethhenrymorgan over 3 years ago - 5 comments

#242 - Remove pytorch channel from conda setup to fix testing

Pull Request - State: closed - Opened by ethanwhite over 3 years ago - 4 comments

#241 - Bounding boxes not overlaying on Image and prediction

Issue - State: closed - Opened by Ruphai over 3 years ago - 8 comments

#240 - Add custom color & thickness for predicted bounding boxes

Pull Request - State: closed - Opened by ethanwhite over 3 years ago - 4 comments

#239 - Bounding boxes visibility

Issue - State: closed - Opened by aditis1204 over 3 years ago - 9 comments

#238 - Multi class training problem

Issue - State: closed - Opened by Smart133594 over 3 years ago - 7 comments

#237 - Add sub tittle for jupyter notebook

Pull Request - State: closed - Opened by henrykironde over 3 years ago

#236 - Normalize paths for all OS systems

Pull Request - State: closed - Opened by henrykironde over 3 years ago

#235 - Train issue

Issue - State: closed - Opened by luforestal over 3 years ago - 3 comments
Labels: question, stale