Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / wdecoster/nanocomp issues and pull requests
#78 - NanoComp_quals_violin question
Issue -
State: open - Opened by MariBGO 3 months ago
- 1 comment
#77 - Compare reads in two FASTQ files based on ReadID
Issue -
State: closed - Opened by LogCrab 5 months ago
- 2 comments
#76 - Error printing whole nanocomp report
Issue -
State: closed - Opened by NikoLichi 6 months ago
- 11 comments
#75 - Empty JSON files / want to format and edit font along plot axes
Issue -
State: open - Opened by HornDW 9 months ago
- 4 comments
#74 - multiple fastq files
Issue -
State: open - Opened by lfrangeu 11 months ago
- 3 comments
#73 - Got negative values on weighted histogram plot
Issue -
State: open - Opened by najohink about 1 year ago
- 7 comments
#72 - A process in the process pool was terminated abruptly while the future was running or pending.
Issue -
State: closed - Opened by HornDW about 1 year ago
- 8 comments
#71 - No static plots are saved due to some kaleido problem
Issue -
State: open - Opened by prasundutta87 about 1 year ago
- 4 comments
#70 - Scaling problem in OverlayHistograms?
Issue -
State: open - Opened by jd3234 about 1 year ago
- 1 comment
#69 - non-normalised histogram comparison?
Issue -
State: open - Opened by celine304 about 1 year ago
- 4 comments
#68 - barcodes missing
Issue -
State: closed - Opened by MarieLataretu over 1 year ago
- 3 comments
#67 - Length of values (5) does not match length of index (2)
Issue -
State: closed - Opened by Ulle22 over 1 year ago
- 3 comments
#66 - Error running NanoComp
Issue -
State: closed - Opened by ekushele over 1 year ago
- 2 comments
#65 - Barcodes in wrong order
Issue -
State: closed - Opened by cmfield over 1 year ago
- 3 comments
#64 - Change plot(ly) plot theme
Issue -
State: open - Opened by sejmodha over 1 year ago
- 2 comments
Labels: enhancement
#63 - Fix license string after license change in 6849e36
Pull Request -
State: closed - Opened by cbrueffer over 1 year ago
- 1 comment
#62 - different total reads for fastq and bam file
Issue -
State: closed - Opened by prasundutta87 almost 2 years ago
- 2 comments
#61 - Static png files not created
Issue -
State: open - Opened by lvann almost 2 years ago
#60 - Weighted Histograms?
Issue -
State: closed - Opened by adramir4 almost 2 years ago
- 2 comments
#59 - Incorrect order and naming
Issue -
State: open - Opened by shannoneagle about 2 years ago
- 4 comments
#58 - Bar labels swapped for 'total_throughput' graph
Issue -
State: closed - Opened by cdebuck about 2 years ago
- 1 comment
#57 - Different timestamp formats causes crash
Issue -
State: closed - Opened by schorlton about 2 years ago
- 3 comments
#56 - about extreme base call quality score
Issue -
State: closed - Opened by prasundutta87 over 2 years ago
- 2 comments
#55 - Autoscale outputs
Issue -
State: closed - Opened by schorlton over 2 years ago
- 3 comments
#54 - NanoStats read number does not match other tools
Issue -
State: open - Opened by callumparr over 2 years ago
- 1 comment
#53 - kaleido problem with unsupported format random 'p' format?
Issue -
State: closed - Opened by callumparr over 2 years ago
- 4 comments
#52 - How to modify axis limits/or reduce read length
Issue -
State: closed - Opened by albuskilili over 2 years ago
- 1 comment
#51 - Use .txt file of filepaths to multiple fastq files as input
Issue -
State: closed - Opened by ew367 over 2 years ago
- 2 comments
#50 - Feature Request: Pore and cumulative yield comparisons?
Issue -
State: closed - Opened by schorlton over 2 years ago
- 11 comments
#49 - ValueError
Issue -
State: closed - Opened by dKlee99 about 3 years ago
- 19 comments
#48 - added sorting of the read counts
Pull Request -
State: closed - Opened by iliasbukraa about 3 years ago
#47 - Legend colors
Issue -
State: closed - Opened by sefayten about 3 years ago
- 2 comments
Labels: enhancement
#46 - NanoComp: error: unrecognized arguments: --names
Issue -
State: closed - Opened by arz19893 about 3 years ago
- 3 comments
#45 - added plotting of phred graphs and some small reformatting of code
Pull Request -
State: closed - Opened by iliasbukraa over 3 years ago
#44 - html changes when table overflows, different colors for violin/box, format option added and readme/test script changes
Pull Request -
State: closed - Opened by iliasbukraa over 3 years ago
#43 - Seaborn requirement should be added to setup
Issue -
State: closed - Opened by seanrj-conagen over 3 years ago
- 3 comments
#42 - added html styling (same as NanoPlot)
Pull Request -
State: closed - Opened by iliasbukraa over 3 years ago
- 1 comment
#41 - Error when using multiple threads for NanoComp
Issue -
State: closed - Opened by callumparr over 3 years ago
- 9 comments
#40 - TypeError: write_stats() got an unexpected keyword argument 'as_tsv'
Issue -
State: closed - Opened by Annie-msi over 3 years ago
- 3 comments
#39 - removed subsample function, which is now imported from nanoplotter
Pull Request -
State: closed - Opened by iliasbukraa over 3 years ago
#38 - removed subsample_datasets function (added in NanoPlot package) and a…
Pull Request -
State: closed - Opened by iliasbukraa over 3 years ago
#37 - modified compare_sequencing_speed function in compplots.py to plot li…
Pull Request -
State: closed - Opened by iliasbukraa over 3 years ago
- 1 comment
#36 - rewrote functions n50_barplot/output_barplot/violin_or_box_plot
Pull Request -
State: closed - Opened by iliasbukraa over 3 years ago
#35 - DeprecationWarning for nanomath
Issue -
State: closed - Opened by PanZiwei almost 4 years ago
- 1 comment
#34 - NanoComp fails with ValueError
Issue -
State: closed - Opened by utrivedi almost 4 years ago
- 4 comments
#33 - Overlaying histograms of percent identity
Issue -
State: closed - Opened by wdecoster about 4 years ago
- 1 comment
Labels: enhancement
#32 - release tag?
Issue -
State: closed - Opened by smoe about 4 years ago
- 2 comments
#31 - Update license classifier
Pull Request -
State: closed - Opened by cbrueffer about 4 years ago
- 1 comment
#30 - Running NanoComp with a pickle file
Issue -
State: closed - Opened by AMTZ-ssi about 4 years ago
- 3 comments
#28 - reads above quality cutoffs
Issue -
State: closed - Opened by LeilyR over 4 years ago
- 4 comments
#27 - Add option to get stats with --pickle analogous to NanoPlot
Issue -
State: closed - Opened by Sophie-Gallina over 4 years ago
- 5 comments
#26 - Calculating N50?
Issue -
State: closed - Opened by Mailinnia over 4 years ago
- 4 comments
#25 - illumina bam
Issue -
State: closed - Opened by aspitaleri over 4 years ago
- 7 comments
#24 - Add args.ubam & args.cram
Pull Request -
State: closed - Opened by ChristinaPapastolopoulou over 4 years ago
- 1 comment
#23 - ValueError: max_workers must be greater than 0
Issue -
State: closed - Opened by Nazeeefa over 4 years ago
- 5 comments
#22 - Pysam UnicodeDecodeError: 'ascii' codec can't decode byte 0xc3 in position 499: ordinal not in range(128)
Issue -
State: closed - Opened by Markestine almost 5 years ago
- 8 comments
#20 - Normalized log transformed read length histogram seems wrong
Issue -
State: closed - Opened by mldmort about 5 years ago
- 4 comments
#19 - Comulativeyieldplot_gigabases raw data
Issue -
State: closed - Opened by anja999 about 5 years ago
- 14 comments
#18 - NanoComp raw data
Issue -
State: closed - Opened by aspitaleri over 5 years ago
- 9 comments
#17 - NanoStats "Number of reads" greater than input fastq reads
Issue -
State: closed - Opened by kkowalden over 5 years ago
- 2 comments
#16 - connection to Plotly-orca fail
Issue -
State: closed - Opened by callumparr over 5 years ago
- 3 comments
#15 - Barchart throughput should use aligned bases when using bam input
Issue -
State: closed - Opened by wdecoster over 5 years ago
Labels: enhancement
#14 - Add cram support
Issue -
State: closed - Opened by wdecoster almost 6 years ago
- 3 comments
Labels: enhancement
#13 - Discrepancies in stats output between different bam alignments of same fasta file
Issue -
State: closed - Opened by ggstatgen almost 6 years ago
- 4 comments
Labels: question
#12 - log scale histograms
Issue -
State: closed - Opened by tolot27 about 6 years ago
- 2 comments
Labels: enhancement
#11 - Number of threads not controlled when using bam input
Issue -
State: closed - Opened by wdecoster about 6 years ago
- 1 comment
#10 - adding dynamic overlay histograms from plotly
Pull Request -
State: closed - Opened by wdecoster over 6 years ago
#9 - Name order not kept in final graphical outputs
Issue -
State: closed - Opened by damientully over 6 years ago
- 2 comments
Labels: enhancement
#8 - NanoStats.txt file output
Issue -
State: closed - Opened by devonorourke over 6 years ago
- 2 comments
Labels: bug
#7 - color control
Issue -
State: closed - Opened by devonorourke over 6 years ago
- 2 comments
Labels: enhancement
#6 - TypeError: 'NoneType' object is not iterable
Issue -
State: closed - Opened by SAMtoBAM over 6 years ago
- 13 comments
#5 - TypeError: write_stats() got an unexpected keyword argument 'datadfs'
Issue -
State: closed - Opened by GabyBG almost 7 years ago
- 1 comment
#4 - feature request?
Issue -
State: closed - Opened by devonorourke almost 7 years ago
- 16 comments
#3 - adding boxplots
Pull Request -
State: closed - Opened by wdecoster almost 7 years ago
#2 - moving get input to nanoget
Pull Request -
State: closed - Opened by wdecoster almost 7 years ago
#1 - Adding args.names
Pull Request -
State: closed - Opened by wdecoster almost 7 years ago