waltsims/k-wave-python issues and pull requests

#167 - v1.4.0 [NewFunction] makeCartDisc

Issue - State: closed - Opened by waltsims about 2 years ago

#166 - Add make_cart_spherical_segment and test

Pull Request - State: closed - Opened by waltsims about 2 years ago

#165 - Add make_cart_disc

Pull Request - State: closed - Opened by waltsims about 2 years ago - 1 comment

#164 - Add make_cart_bowl

Pull Request - State: closed - Opened by waltsims about 2 years ago

#163 - Bump scipy from 1.10.1 to 1.11.1

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment
Labels: dependencies

#162 - updated makeCartBowl

Pull Request - State: closed - Opened by ameya1252 about 2 years ago - 2 comments

#161 - MATLAB data collector for testing kWaveArray

Pull Request - State: closed - Opened by faridyagubbayli about 2 years ago

#160 - Bump scipy from 1.10.1 to 1.11.0

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment
Labels: dependencies

#159 - `kspaceFirstOrder3D` always run on GPU, even when `kspaceFirstOrder3DC` is called

Issue - State: closed - Opened by guillaumedavidphd about 2 years ago - 1 comment

#158 - Clean up documentation

Pull Request - State: closed - Opened by waltsims about 2 years ago

#157 - Write MATLAB datacollector for testing kWaveArray

Issue - State: closed - Opened by waltsims about 2 years ago

#156 - v1.4.0 [NewFunction] kWaveArray

Issue - State: closed - Opened by waltsims about 2 years ago

#155 - v1.4.0 [NewFunction] makeCartSphericalSegment

Issue - State: closed - Opened by waltsims about 2 years ago

#154 - Update focus_bowl_oneil to return complex axial pressure

Pull Request - State: closed - Opened by waltsims about 2 years ago

#153 - v1.4.0 [Feature] focusedBowlONeil can now return the complex pressure on axis

Issue - State: closed - Opened by waltsims about 2 years ago

#152 - Migrate documentation to Readthedocs

Pull Request - State: closed - Opened by waltsims about 2 years ago

#151 - v1.4.0 [NewFunction] makeCartBowl

Issue - State: closed - Opened by waltsims about 2 years ago

#150 - Add get_delta_BLI and test

Pull Request - State: closed - Opened by waltsims about 2 years ago - 1 comment

#149 - Add makeCartArc and tests

Pull Request - State: closed - Opened by waltsims about 2 years ago

#148 - Update fwhm return values for v1.4.0

Pull Request - State: closed - Opened by waltsims about 2 years ago

#147 - Bump scikit-image from 0.19.3 to 0.21.0

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago
Labels: dependencies

#146 - New funcs: get_affine_matrix() and compute_linear_transform()

Pull Request - State: closed - Opened by faridyagubbayli about 2 years ago - 1 comment

#145 - Bump m2r2 from 0.3.2 to 0.3.3.post2

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 2 comments
Labels: dependencies

#144 - Bump deepdiff from 6.2.3 to 6.3.0

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment
Labels: dependencies

#143 - Bump gdown from 4.6.4 to 4.7.1

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago
Labels: dependencies

#142 - Bump furo from 2022.12.7 to 2023.5.20

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment
Labels: dependencies

#141 - v.1.4.0 [Feature] fwhm can now return the position of the leading and trailing edges

Issue - State: closed - Opened by waltsims about 2 years ago

#140 - v.1.4.0 [NewFunction] makeCartArc

Issue - State: closed - Opened by waltsims about 2 years ago

#139 - v1.4.0 [NewFunction] computeLinearTransform

Issue - State: closed - Opened by waltsims about 2 years ago

#138 - v1.4.0 [NewFunction] getAffineMatrix

Issue - State: closed - Opened by waltsims about 2 years ago

#137 - v1.4.0 [NewFunction] getDeltaBLI

Issue - State: closed - Opened by waltsims about 2 years ago

#136 - Migrate sphinx-build config to pyproject and switch github action

Issue - State: closed - Opened by waltsims about 2 years ago - 2 comments
Labels: documentation, good first issue

#135 - `SimulationExecutionOptions` is not in kwave.options anymore

Issue - State: closed - Opened by astanziola about 2 years ago - 3 comments

#134 - Python implementation of `trimCartPoints`

Pull Request - State: closed - Opened by faridyagubbayli about 2 years ago

#133 - v1.4.0 [NewFunction] trimCartPoints

Issue - State: closed - Opened by faridyagubbayli about 2 years ago

#132 - Linting with Ruff

Issue - State: closed - Opened by waltsims about 2 years ago
Labels: development

#131 - Create ruff.yml

Pull Request - State: closed - Opened by waltsims about 2 years ago - 1 comment
Labels: enhancement

#130 - v1.4.0 [NewFunction] offGridPoints

Issue - State: closed - Opened by waltsims about 2 years ago
Labels: enhancement

#129 - missing artifact download link/testing/instruction/script for local testing.

Issue - State: open - Opened by waltsims about 2 years ago
Labels: documentation

#128 - Add trim_zeros function and test

Pull Request - State: closed - Opened by waltsims about 2 years ago - 2 comments

#127 - v1.4.0 [NewFunction] trimZeros

Issue - State: closed - Opened by waltsims about 2 years ago
Labels: enhancement

#126 - Python implementation of `makeCartRect`

Pull Request - State: closed - Opened by faridyagubbayli about 2 years ago

#125 - v.1.4.0 [NewFunction] makeCartRect

Issue - State: closed - Opened by faridyagubbayli about 2 years ago
Labels: enhancement

#124 - Vectorize variables

Pull Request - State: closed - Opened by faridyagubbayli about 2 years ago

#123 - Update README.md to fix broken docs link

Pull Request - State: closed - Opened by waltsims about 2 years ago

#122 - Time reversal example

Issue - State: closed - Opened by hhapk about 2 years ago - 5 comments
Labels: example

#121 - Bump sphinx-copybutton from 0.5.1 to 0.5.2

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#120 - Bump scikit-image from 0.19.3 to 0.20.0

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 2 comments
Labels: dependencies

#119 - rename pages to publish_pages

Pull Request - State: closed - Opened by waltsims over 2 years ago

#118 - Replace Array class with numpy-based Vector class

Pull Request - State: closed - Opened by faridyagubbayli over 2 years ago

#117 - kwave.Array operator support ( + - * / etc...)

Issue - State: closed - Opened by faridyagubbayli over 2 years ago

#116 - Bump k-Wave test version to v1.4.0

Pull Request - State: closed - Opened by waltsims over 2 years ago - 3 comments

#115 - @dataclass usage inconsistent

Issue - State: closed - Opened by bshieh-bfly over 2 years ago - 4 comments
Labels: enhancement, development

#114 - Bump matplotlib from 3.6.3 to 3.7.1

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#113 - Bump h5py from 3.6.0 to 3.8.0

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 2 comments
Labels: dependencies

#112 - Bump opencv-python from 4.7.0.68 to 4.7.0.72

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 2 comments
Labels: dependencies

#111 - Bump matplotlib from 3.6.3 to 3.7.0

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#110 - Bump gdown from 4.6.0 to 4.6.4

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#109 - Bump scipy from 1.7.3 to 1.10.1

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 6 comments
Labels: dependencies

#108 - Example script refactor and added testing

Pull Request - State: closed - Opened by waltsims over 2 years ago - 1 comment

#107 - Refactor kSpaceFirstOrder inputs

Pull Request - State: closed - Opened by faridyagubbayli over 2 years ago - 3 comments

#106 - Bump gdown from 4.6.0 to 4.6.3

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#105 - v0.2.1 release

Pull Request - State: closed - Opened by waltsims over 2 years ago

#104 - Install_path_bugfix

Pull Request - State: closed - Opened by waltsims over 2 years ago

#103 - v0.2.0 release

Pull Request - State: closed - Opened by waltsims over 2 years ago

#101 - V0.2.0 release

Pull Request - State: closed - Opened by waltsims over 2 years ago

#99 - Bump sphinx-toolbox from 3.2.0 to 3.4.0

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#98 - Bump m2r2 from 0.3.2 to 0.3.3.post2

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#97 - Extend resize test to nerest neighbor interpolation

Issue - State: closed - Opened by waltsims over 2 years ago

#96 - Attention Compensation: implementation & test

Pull Request - State: closed - Opened by faridyagubbayli over 2 years ago - 1 comment

#95 - Angular Spectrum CW: implementation & test

Pull Request - State: closed - Opened by faridyagubbayli over 2 years ago

#94 - Remove branches automatically when merging a PR

Issue - State: closed - Opened by faridyagubbayli over 2 years ago - 1 comment

#93 - Bump m2r2 from 0.3.2 to 0.3.3

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#92 - Bump opencv-python from 4.6.0.66 to 4.7.0.68

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#91 - Bump matplotlib from 3.6.1 to 3.6.3

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#90 - Update License

Pull Request - State: closed - Opened by waltsims over 2 years ago

#89 - [WIP] Lazy binary install strategy

Pull Request - State: closed - Opened by waltsims over 2 years ago - 5 comments

#88 - Bump scipy from 1.7.3 to 1.10.0

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#87 - Bump deepdiff from 5.2.3 to 6.2.3

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#86 - Download binares at install time from github relsease

Issue - State: closed - Opened by waltsims over 2 years ago

#83 - angular_spectrum: implementation & test

Pull Request - State: closed - Opened by faridyagubbayli over 2 years ago

#82 - [WIP] Docs cleanup

Pull Request - State: closed - Opened by waltsims over 2 years ago - 4 comments

#81 - Updated documentation of utility functions.

Issue - State: closed - Opened by waltsims over 2 years ago

#80 - Misssing collectors cleanup

Pull Request - State: closed - Opened by waltsims over 2 years ago

#79 - ImportError: cannot import name 'ChannelData' from 'uff'

Issue - State: closed - Opened by hhapk over 2 years ago - 3 comments

#78 - Download binaries at install time

Issue - State: closed - Opened by waltsims over 2 years ago

#77 - support darwin cpu execution.

Pull Request - State: closed - Opened by waltsims over 2 years ago - 4 comments
Labels: enhancement, help wanted

#76 - remove all import-alls

Pull Request - State: closed - Opened by waltsims over 2 years ago

#75 - Simplify pml and pml alpha logic

Issue - State: closed - Opened by waltsims over 2 years ago - 3 comments

#74 - update readme to look better

Issue - State: closed - Opened by waltsims over 2 years ago

#73 - Fix import cycles... imports are a mess!

Issue - State: closed - Opened by waltsims over 2 years ago

#72 - support NVIDIA sm => 8.0.

Issue - State: closed - Opened by waltsims over 2 years ago - 2 comments

#71 - refactor option string parsing.

Issue - State: closed - Opened by waltsims over 2 years ago - 1 comment

#70 - Technical debt collectors from add testing PR

Issue - State: closed - Opened by waltsims over 2 years ago

#69 - Support Darwin.

Issue - State: closed - Opened by waltsims over 2 years ago - 2 comments

#68 - Update numpy requirement from ~=1.22.2 to >=1.22.2,<1.25.0

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#67 - Bump deepdiff from 5.2.3 to 6.2.2

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#66 - add docs dependency version requirements

Pull Request - State: closed - Opened by waltsims over 2 years ago

#65 - Unskip tests

Pull Request - State: closed - Opened by waltsims over 2 years ago - 1 comment

#64 - Options refactor

Pull Request - State: closed - Opened by waltsims over 2 years ago - 1 comment

GitHub / waltsims/k-wave-python issues and pull requests