waltsims/k-wave-python issues and pull requests

#538 - Release/v0.4.0

Pull Request - State: closed - Opened by waltsims 20 days ago - 1 comment

#537 - Bump scipy from 1.14.1 to 1.15.0

Pull Request - State: open - Opened by dependabot[bot] 26 days ago - 1 comment
Labels: dependencies

#536 - [BUG] kspaceFirstOrder-CUDA: error

Issue - State: open - Opened by mggonza about 1 month ago - 1 comment
Labels: bug

#535 - Bump coverage from 7.6.9 to 7.6.10

Pull Request - State: open - Opened by dependabot[bot] about 1 month ago - 1 comment
Labels: dependencies

#534 - [BUG] google colab installation issues

Issue - State: closed - Opened by elma16 about 1 month ago - 2 comments
Labels: bug

#533 - Speed-up kwavearray functions

Pull Request - State: open - Opened by faberno about 1 month ago

#532 - Bump deepdiff from 8.0.1 to 8.1.1

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago - 1 comment
Labels: dependencies

#531 - Migrate license to LGPL-3.0

Pull Request - State: closed - Opened by waltsims about 1 month ago - 1 comment

#530 - Bump matplotlib from 3.9.3 to 3.10.0

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago - 1 comment
Labels: dependencies

#529 - Update execution options APIs

Pull Request - State: closed - Opened by waltsims about 2 months ago - 4 comments

#527 - Update numpy requirement from <2.2.0,>=1.22.2 to >=1.22.2,<2.3.0

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago - 2 comments
Labels: dependencies

#526 - Bump coverage from 7.6.8 to 7.6.9

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago - 1 comment
Labels: dependencies

#524 - Bump matplotlib from 3.9.2 to 3.9.3

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago - 1 comment
Labels: dependencies

#523 - [Feature] Parallelize kwavearray functions

Issue - State: open - Opened by faberno 2 months ago - 7 comments
Labels: enhancement

#522 - Incorrect dimensions in us_bmode_phased_array.py plot

Issue - State: open - Opened by brubbel 2 months ago

#521 - reduce complexity of simulation options

Pull Request - State: open - Opened by waltsims 2 months ago

#520 - Update simulation_options.py

Pull Request - State: closed - Opened by waltsims 2 months ago - 1 comment

#519 - [BUG] Typo in option_factory

Issue - State: closed - Opened by brubbel 2 months ago

#518 - [BUG] Transmit apodization/window is never applied to transducer source.

Issue - State: open - Opened by brubbel 2 months ago - 2 comments
Labels: bug

#517 - Bump coverage from 7.6.7 to 7.6.8

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago - 1 comment
Labels: dependencies

#516 - [BUG] Mismatch Between p_max_all Size and Expected Grid Dimensions

Issue - State: open - Opened by mikaelhaji 2 months ago - 2 comments
Labels: bug

#515 - bump-version-0.3.7

Pull Request - State: closed - Opened by waltsims 2 months ago - 1 comment

#514 - Deactivate number of threads (-t) option on windows

Pull Request - State: closed - Opened by waltsims 2 months ago - 1 comment

#513 - [BUG] Windows CUDA binary fails with threads (-t) option in k-wave-python 0.3.6

Issue - State: closed - Opened by mikaelhaji 2 months ago
Labels: bug

#512 - Numpy v2.0 ruff linting

Pull Request - State: closed - Opened by waltsims 2 months ago - 1 comment

#511 - v0.3.6

Pull Request - State: closed - Opened by waltsims 2 months ago - 3 comments

#510 - Fix numpy warnings

Pull Request - State: closed - Opened by waltsims 2 months ago - 3 comments

#509 - bugfix simulation command options

Pull Request - State: closed - Opened by brubbel 2 months ago - 1 comment

#508 - Bump jaxtyping from 0.2.34 to 0.2.36

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 1 comment
Labels: dependencies

#507 - Bump coverage from 7.6.4 to 7.6.7

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 1 comment
Labels: dependencies

#506 - Bump3.13 drop3.9

Pull Request - State: closed - Opened by waltsims 3 months ago - 1 comment

#505 - bump python 3.13 drop python 3.9

Pull Request - State: closed - Opened by waltsims 3 months ago - 1 comment

#504 - Release v0.3.5

Pull Request - State: closed - Opened by waltsims 3 months ago - 1 comment

#503 - [ENHANCE] Automate release workflow through makefile rule

Issue - State: open - Opened by faridyagubbayli 3 months ago
Labels: enhancement

#502 - [ENHANCE] Add a CI action to run all examples on a fixed schedule

Issue - State: open - Opened by faridyagubbayli 3 months ago - 1 comment
Labels: enhancement

#501 - [BUG]Voxel Plot switched axes

Issue - State: open - Opened by faberno 3 months ago
Labels: bug

#500 - Add Modelling Sensor Directivity In 2D Example

Pull Request - State: closed - Opened by faridyagubbayli 3 months ago - 2 comments

#499 - [ENHANCE] add build and matlab reference download to makefile

Issue - State: open - Opened by waltsims 3 months ago
Labels: enhancement

#498 - Suppress the FileNotFound error when attempting to set the file mode

Pull Request - State: closed - Opened by faridyagubbayli 3 months ago - 3 comments

#497 - Bump scipy from 1.13.1 to 1.14.1

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 3 comments
Labels: dependencies

#496 - Update numpy requirement from <1.27.0,>=1.22.2 to >=1.22.2,<2.2.0

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 5 comments
Labels: dependencies

#495 - Add Focussed Detector In 3D Example

Pull Request - State: closed - Opened by faridyagubbayli 3 months ago - 1 comment

#494 - add python file and update description

Pull Request - State: closed - Opened by waltsims 3 months ago

#493 - Update environment variable generation for safer execution

Pull Request - State: closed - Opened by waltsims 3 months ago - 3 comments

#492 - Add Focussed Detector In 2D Example

Pull Request - State: closed - Opened by faridyagubbayli 3 months ago - 1 comment

#491 - [Enhancement] Improve the subprocess call robustness

Issue - State: closed - Opened by waltsims 3 months ago

#490 - Moving media - anisotropic speed of sound implementation

Issue - State: open - Opened by Ambr0K 3 months ago - 7 comments
Labels: question

#489 - Update executor.py to handle spaces in binary path

Pull Request - State: closed - Opened by djps 3 months ago - 1 comment

#488 - [BUG]str'ascii' codec can't encode characters in position 22-23: ordinal not in range(128)

Issue - State: closed - Opened by lxy-zjn 3 months ago - 3 comments
Labels: bug

#487 - Bump coverage from 7.6.3 to 7.6.4

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 1 comment
Labels: dependencies

#486 - Bump sphinx-tabs from 3.4.5 to 3.4.7

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 1 comment
Labels: dependencies

#485 - Bump sphinx-toolbox from 3.8.0 to 3.8.1

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 2 comments
Labels: dependencies

#484 - [BUG] Paths with spaces can cause executor to fail

Issue - State: closed - Opened by ebrahimebrahim 3 months ago - 6 comments
Labels: bug

#483 - Bump coverage from 7.6.1 to 7.6.3

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 1 comment
Labels: dependencies

#482 - Bump pre-commit from 3.8.0 to 4.0.1

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 1 comment
Labels: dependencies

#481 - Bump pre-commit from 3.8.0 to 4.0.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 2 comments
Labels: dependencies

#480 - add ability to run all examples

Pull Request - State: closed - Opened by waltsims 4 months ago - 4 comments

#479 - Bump h5py from 3.11.0 to 3.12.1

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 1 comment
Labels: dependencies

#478 - Bump beartype from 0.18.5 to 0.19.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 1 comment
Labels: dependencies

#477 - [ISSUE #473] Update simulation_execution_options.is_gpu_simulation() API

Pull Request - State: closed - Opened by waltsims 4 months ago - 6 comments

#476 - Do not bind process in MacOS

Pull Request - State: closed - Opened by faridyagubbayli 4 months ago - 3 comments

#475 - FFT + Time Reversal Reconstruction

Pull Request - State: closed - Opened by faberno 5 months ago - 14 comments

#474 - Typo in at_annular_array_3D script

Pull Request - State: closed - Opened by waltsims 5 months ago - 1 comment

#473 - [ENHANCE] Improve simulation_execution_options.is_gpu_

Issue - State: closed - Opened by waltsims 5 months ago - 3 comments
Labels: enhancement

#472 - [Enhancement] Improve p0 mutation behavior

Issue - State: open - Opened by waltsims 5 months ago - 1 comment
Labels: enhancement

#471 - [Enhancement] Update Recorder logic in kSim

Issue - State: open - Opened by waltsims 5 months ago
Labels: enhancement

#470 - [BUG] Axis-symmetric simulation not supported on Darwin

Issue - State: open - Opened by waltsims 5 months ago
Labels: bug

#469 - [BUG] make_multi_bowl

Issue - State: open - Opened by djps 5 months ago - 1 comment
Labels: documentation, enhancement

#468 - Handling p0 input in source

Issue - State: open - Opened by djps 5 months ago - 1 comment
Labels: bug

#467 - Bump sphinx-mdinclude from 0.6.1 to 0.6.2

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies

#466 - Bump deepdiff from 7.0.1 to 8.0.1

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies

#465 - Bump pre-commit from 3.7.1 to 3.8.0

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies

#464 - Bump jaxtyping from 0.2.31 to 0.2.34

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies

#463 - Small bug fixes

Pull Request - State: closed - Opened by faberno 5 months ago - 9 comments

#462 - 460 element equality

Pull Request - State: open - Opened by precicely 5 months ago - 5 comments

#461 - [ENHANCE] Warn User if kgrid does not allow for the resolution of cart2grid points

Issue - State: open - Opened by waltsims 5 months ago
Labels: enhancement

#460 - [ENHANCE] Element equality for numpy array attributes

Issue - State: open - Opened by precicely 5 months ago
Labels: enhancement

#459 - [Help Wanted]

Issue - State: closed - Opened by TullyMonster 5 months ago - 3 comments
Labels: example

#458 - update logger messages with f-strings

Pull Request - State: closed - Opened by waltsims 5 months ago - 1 comment

#457 - 454 element measure precision

Pull Request - State: closed - Opened by precicely 5 months ago - 9 comments

#456 - Bump furo from 2024.5.6 to 2024.8.6

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies

#455 - #454: measure no longer has enforced decimal places. Closes #454.

Pull Request - State: closed - Opened by precicely 5 months ago - 1 comment

#454 - [BUG] loss of precision in measure field of Element

Issue - State: closed - Opened by precicely 5 months ago - 5 comments
Labels: bug

#453 - clear ruff errors in examples

Pull Request - State: closed - Opened by waltsims 6 months ago - 1 comment

#452 - Bump sphinx-toolbox from 3.6.0 to 3.8.0

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies

#451 - Bump matplotlib from 3.9.0 to 3.9.2

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies

#450 - Elastic kmedium

Pull Request - State: closed - Opened by djps 6 months ago - 2 comments
Labels: enhancement, help wanted, development

#449 - Update ksource.py

Pull Request - State: closed - Opened by djps 6 months ago - 2 comments
Labels: enhancement, help wanted, development

#448 - [BUG] Indices for Recorder

Issue - State: open - Opened by djps 6 months ago - 1 comment
Labels: bug

#447 - [ENHANCE] Extend kSource to handle elastic wave propagation

Issue - State: open - Opened by djps 6 months ago
Labels: enhancement

#446 - [ENHANCE] Extend kMedium to handle elastic wave propagation

Issue - State: open - Opened by djps 6 months ago
Labels: enhancement

#445 - #441 Add us beams example

Pull Request - State: closed - Opened by gordon-n-stevenson 6 months ago - 14 comments

#444 - Bump matplotlib from 3.9.0 to 3.9.1.post1

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 2 comments
Labels: dependencies

#443 - Bump coverage from 7.5.4 to 7.6.1

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies

#442 - [ENHANCE] Investigate replacing dotdict with SimpleNamespace.

Issue - State: closed - Opened by waltsims 6 months ago - 1 comment
Labels: enhancement

#441 - [ENHANCE] Porting Simulating Ultrasound Beam Patterns Example

Issue - State: closed - Opened by KR616 7 months ago
Labels: enhancement

#440 - [ENHANCE] Unify repository documentation

Issue - State: closed - Opened by KR616 7 months ago - 1 comment
Labels: enhancement

#439 - Refactor kArray

Pull Request - State: open - Opened by waltsims 7 months ago

#438 - Bump coverage from 7.5.4 to 7.6.0

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago - 2 comments
Labels: dependencies

#437 - Refactor ktransducer

Pull Request - State: open - Opened by faridyagubbayli 7 months ago - 3 comments

GitHub / waltsims/k-wave-python issues and pull requests