waldronlab/doppelgangR issues and pull requests

#21 - Failing R CMD check

Issue - State: closed - Opened by jwokaty over 1 year ago - 2 comments

#20 - fit=mst.mle(design, response, start=para, fixed.df=NA, trace=FALSE, algorithm="BFGS", control = list(fnscale=-1) )

Issue - State: closed - Opened by reem-hassan over 4 years ago - 1 comment
Labels: needs information

#19 - Use tidy version of coords (xrobin/pROC#54)

Pull Request - State: closed - Opened by xrobin over 5 years ago

#18 - Add colFinder and update doc with roxygen2

Pull Request - State: closed - Opened by maddahi93 almost 7 years ago
Labels: enhancement

#17 - Bug in phenoDist()

Issue - State: closed - Opened by maddahi93 almost 7 years ago

#16 - Place to keep the confirmed duplicates file not in the package.

Issue - State: closed - Opened by lwaldron about 9 years ago - 1 comment
Labels: wontfix

#15 - BiocParallel not invoked properly

Issue - State: open - Opened by lwaldron almost 10 years ago
Labels: enhancement

#14 - Not working with single ExpressionSet input or list of two identical ExpressionSets

Issue - State: closed - Opened by lwaldron about 10 years ago - 1 comment
Labels: enhancement

#13 - errors with smokingFinder only and cache.dir=TRUE

Issue - State: closed - Opened by lwaldron about 10 years ago - 1 comment
Labels: bug

#12 - inst/CRC.R as wrap-up error.

Issue - State: closed - Opened by lwaldron about 10 years ago - 1 comment
Labels: bug

#11 - plot method should show skew-t fit and red vertical line showing threshold

Issue - State: closed - Opened by lwaldron over 10 years ago - 2 comments

#10 - NAs in @summaryresults

Issue - State: closed - Opened by lwaldron almost 11 years ago - 3 comments
Labels: enhancement

#9 - parallelize

Issue - State: closed - Opened by lwaldron almost 11 years ago - 1 comment
Labels: enhancement

#8 - Try to speed up by sampling genes.

Issue - State: closed - Opened by lwaldron almost 11 years ago - 3 comments
Labels: enhancement

#7 - ?doppelgangR

Issue - State: closed - Opened by lima1 almost 11 years ago - 1 comment

#6 - Number of potential doppelgangers isn't properly counted when outlierFinder.pheno.args=NULL

Issue - State: closed - Opened by lwaldron about 11 years ago - 1 comment
Labels: bug

#5 - summary method for DoppelGang class

Issue - State: closed - Opened by lwaldron about 11 years ago - 1 comment
Labels: enhancement

#4 - Separate batch correction / correlation calculations from outlier calling