Ecosyste.ms: Issues

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GitHub / vocalpy/crowsetta issues and pull requests

#284 - Add chipper format

Issue - State: open - Opened by NickleDave 3 months ago
Labels: ENH: enhancement, annotation format

#280 - Version 5.1

Pull Request - State: closed - Opened by NickleDave 4 months ago

#277 - Rename `Sequence` to `Segments`

Issue - State: open - Opened by NickleDave 4 months ago
Labels: ENH: enhancement

#276 - ENH: Add `__len__` to `Sequence`

Issue - State: closed - Opened by NickleDave 4 months ago
Labels: ENH: enhancement

#275 - DOC: Add how-to showing how to work with unannotated segmentation in a csv file

Issue - State: closed - Opened by NickleDave 4 months ago
Labels: DOC: documentation

#274 - ENH: Add csv file from Jourjine et al 2023 as test data and example

Issue - State: closed - Opened by NickleDave 4 months ago
Labels: ENH: enhancement

#273 - ENH/CLN: Import format classes at package level

Issue - State: closed - Opened by NickleDave 4 months ago
Labels: ENH: enhancement

#272 - ENH: Have SimpleSeq *only* map columns specified in `columns_map`, throw away others

Issue - State: closed - Opened by NickleDave 4 months ago
Labels: ENH: enhancement

#270 - ENH: consider adding support for GUANO audio metadata parsing/writing

Issue - State: open - Opened by sammlapp 4 months ago - 5 comments
Labels: ENH: enhancement, annotation format

#269 - DEV/CLN: Drop pandera dependency?

Issue - State: open - Opened by NickleDave 7 months ago - 1 comment

#268 - DEV: Bump lower bound on requires python to >=3.10

Pull Request - State: closed - Opened by NickleDave 7 months ago

#267 - DEV/CLN: Bump lower bound on requires_python to 3.10

Issue - State: closed - Opened by NickleDave 7 months ago
Labels: DEV: development, CLN: clean/refactor, dependencies

#266 - BUG: Rename `pandera.SchemaModel` -> DataFrameModel, fix #265

Pull Request - State: closed - Opened by NickleDave 7 months ago

#265 - BUG: fresh install results in ImportError / Pandera AttributeError

Issue - State: closed - Opened by NickleDave 7 months ago - 3 comments
Labels: BUG: bug

#264 - ENH: Make SimpleSeq work with empty annotations

Issue - State: closed - Opened by NickleDave 9 months ago - 1 comment
Labels: ENH: enhancement

#263 - CLN/MAINT: Vendor code, fix #262

Pull Request - State: closed - Opened by NickleDave about 1 year ago - 1 comment

#262 - Vendor evfuncs/birdsong-recognition code

Issue - State: closed - Opened by NickleDave about 1 year ago

#261 - BUG: Issue converting raven.txt file to simple-seq

Issue - State: closed - Opened by sfcooke96 about 1 year ago - 3 comments

#260 - docs: add sammlapp as a contributor for ideas

Pull Request - State: closed - Opened by allcontributors[bot] over 1 year ago

#259 - ENH: Store Annotation data in consistent format

Issue - State: open - Opened by sammlapp over 1 year ago - 3 comments
Labels: ENH: enhancement

#258 - BUG: Use validated dataframe in `generic.csv2annot`, fix #257

Pull Request - State: closed - Opened by NickleDave over 1 year ago - 1 comment

#256 - Revert "Remove exceptions from birdsongrec.py"

Pull Request - State: closed - Opened by NickleDave over 1 year ago - 1 comment

#255 - Revert remove birdsongrec exceptions

Pull Request - State: closed - Opened by NickleDave over 1 year ago - 1 comment

#254 - Remove exceptions from birdsongrec.py

Pull Request - State: closed - Opened by NickleDave over 1 year ago

#253 - Remove birdsongrec exceptions

Pull Request - State: closed - Opened by NickleDave over 1 year ago - 1 comment

#252 - DOC: Finish munging howto fixup, other clean-ups

Pull Request - State: closed - Opened by NickleDave almost 2 years ago - 1 comment

#251 - DOC: Rewrite remove-silent-labels-textgrid.md, fix #244

Pull Request - State: closed - Opened by NickleDave almost 2 years ago - 1 comment

#250 - Dev cleanup

Pull Request - State: closed - Opened by NickleDave almost 2 years ago - 2 comments

#249 - docs: add shaupert as a contributor for userTesting

Pull Request - State: closed - Opened by allcontributors[bot] almost 2 years ago

#248 - docs: add rhine3 as a contributor for userTesting, and ideas

Pull Request - State: closed - Opened by allcontributors[bot] almost 2 years ago

#246 - ENH: Add `to_file` method for TextGrid

Issue - State: open - Opened by NickleDave almost 2 years ago
Labels: ENH: enhancement, annotation format

#245 - Further cleanups for pyOS review

Pull Request - State: closed - Opened by NickleDave almost 2 years ago

#243 - Finish pyOpenSci review

Pull Request - State: closed - Opened by NickleDave almost 2 years ago - 2 comments

#242 - ENH: Add support for TextGrid files in binary format

Issue - State: open - Opened by NickleDave almost 2 years ago
Labels: ENH: enhancement, annotation format

#241 - ENH: Better handle Praat TextGrids

Issue - State: closed - Opened by NickleDave almost 2 years ago
Labels: ENH: enhancement

#240 - DOC/CLN: Fix cross-refs in docstrings, style. Fixes #239

Pull Request - State: closed - Opened by NickleDave almost 2 years ago

#239 - DOC: Fix/add cross-references in docstrings

Issue - State: closed - Opened by NickleDave almost 2 years ago
Labels: DOC: documentation

#238 - Make fixes for Windows / CI

Pull Request - State: closed - Opened by NickleDave almost 2 years ago - 1 comment

#237 - BUG: Coerce GenericSeq path attributes to str

Pull Request - State: closed - Opened by NickleDave almost 2 years ago - 1 comment

#236 - DEV/CI: Change nox session 'coverage' to not run tests in parallel

Pull Request - State: closed - Opened by NickleDave almost 2 years ago - 1 comment

#235 - Add more docstring examples, fix #234

Pull Request - State: closed - Opened by NickleDave almost 2 years ago

#234 - DOC: Add examples in docstrings where missing

Issue - State: closed - Opened by NickleDave almost 2 years ago
Labels: DOC: documentation

#233 - CI: Fix failing Windows CI (that does not fail locally)

Issue - State: closed - Opened by NickleDave almost 2 years ago - 1 comment

#232 - CLN: Remove unused Segment.from_row method, fix #231

Pull Request - State: closed - Opened by NickleDave almost 2 years ago - 1 comment

#231 - Remove `Segment.from_row` method, no longer used

Issue - State: closed - Opened by NickleDave almost 2 years ago

#230 - Final pyos review cleanup

Pull Request - State: closed - Opened by NickleDave almost 2 years ago

#229 - DOC: Add tutorial on writing a new bbox class similar to the one for a seq class

Issue - State: open - Opened by NickleDave almost 2 years ago
Labels: DOC: documentation

#228 - docs: add shaupert as a contributor for code, and ideas

Pull Request - State: closed - Opened by allcontributors[bot] almost 2 years ago - 2 comments

#227 - Fix vignettes for PyOpenSci review, fix #220

Pull Request - State: closed - Opened by NickleDave almost 2 years ago - 1 comment

#226 - Add format class for Audacity extended label track, fix #213

Pull Request - State: closed - Opened by NickleDave almost 2 years ago - 3 comments

#225 - DOC: Add data file download to howto-user-format.md

Pull Request - State: closed - Opened by NickleDave almost 2 years ago - 1 comment

#224 - Add / fix linting

Pull Request - State: closed - Opened by NickleDave almost 2 years ago - 1 comment

#223 - docs: add rhine3 as a contributor for doc, and bug

Pull Request - State: closed - Opened by allcontributors[bot] almost 2 years ago

#222 - ENH: create a class AudacityBbox to be able to handle the non standard format with bbox

Issue - State: closed - Opened by shaupert almost 2 years ago - 1 comment
Labels: ENH: enhancement

#221 - BUG: test in crowsetta/tests/test_data.py failed

Issue - State: closed - Opened by shaupert almost 2 years ago - 5 comments

#220 - BUG: Some Vignettes don't run

Issue - State: closed - Opened by rhine3 almost 2 years ago - 4 comments

#219 - DEV/TST: Parallelize tests?

Issue - State: closed - Opened by NickleDave almost 2 years ago - 1 comment
Labels: TST: testing, DEV: development

#218 - BUG: tests in test_formats/test_seq/test_generic.py failed

Issue - State: closed - Opened by rhine3 almost 2 years ago - 9 comments

#217 - DOC/CLN: Revise + clean up index.md and 3 how-tos

Pull Request - State: closed - Opened by NickleDave about 2 years ago - 1 comment

#216 - Add / revise vignettes

Pull Request - State: closed - Opened by NickleDave about 2 years ago - 1 comment

#215 - CLN: Fix `GenericSeq.__repr__` to be more concise

Issue - State: open - Opened by NickleDave about 2 years ago

#213 - bbox annotation format: Audacity Extended LabelTrack

Issue - State: closed - Opened by NickleDave about 2 years ago - 2 comments
Labels: annotation format

#212 - Add contributing + dev info, fixes #30

Pull Request - State: closed - Opened by NickleDave about 2 years ago - 1 comment

#211 - DOC: Add vignette of inspecting distribution/ratios of classes in a dataset using simple-seq

Issue - State: open - Opened by NickleDave about 2 years ago
Labels: DOC: documentation

#210 - ENH: Add warbleR / extended selection tables format

Issue - State: open - Opened by NickleDave about 2 years ago
Labels: ENH: enhancement, annotation format

#209 - ENH: Add `seq` format that allows `onset_sample` + `offset_sample`

Issue - State: open - Opened by NickleDave about 2 years ago
Labels: ENH: enhancement

#208 - ENH: Add `from_annot` and/or `from_seq` / `from_bbox` classmethods to format classes?

Issue - State: open - Opened by NickleDave about 2 years ago
Labels: ENH: enhancement

#207 - ENH: Add (back) `to_file` method to `NotMat` class?

Issue - State: open - Opened by NickleDave about 2 years ago
Labels: ENH: enhancement

#206 - ENH: Add Sonic Visualizer annotation format

Issue - State: open - Opened by NickleDave over 2 years ago - 2 comments
Labels: ENH: enhancement, annotation format

#204 - Fix codecov

Pull Request - State: closed - Opened by NickleDave over 2 years ago - 1 comment

#202 - Fixup readme more

Pull Request - State: closed - Opened by NickleDave over 2 years ago

#201 - Fix readme, index, crowsetta name

Pull Request - State: closed - Opened by NickleDave over 2 years ago

#200 - to-do list for 4.1.0

Issue - State: closed - Opened by NickleDave over 2 years ago - 1 comment

#199 - DOC: fix up README

Issue - State: closed - Opened by NickleDave over 2 years ago
Labels: DOC: documentation

#198 - Add logo

Pull Request - State: closed - Opened by NickleDave over 2 years ago

#196 - Add 'elan' format

Issue - State: open - Opened by NickleDave over 2 years ago - 2 comments
Labels: annotation format

#195 - BUG: Make `data.get` return example after extracting, fixes #186

Pull Request - State: closed - Opened by NickleDave over 2 years ago

#194 - ENH: Make `formats.as_list` return sorted, fixes #187

Pull Request - State: closed - Opened by NickleDave over 2 years ago

#193 - CLN: Remove Meta class, now unused. Fixes #190

Pull Request - State: closed - Opened by NickleDave over 2 years ago

#192 - ENH: add `'generic-bbox'` format

Issue - State: open - Opened by NickleDave over 2 years ago
Labels: ENH: enhancement, annotation format

#191 - Rewrite docs fixes #152

Pull Request - State: closed - Opened by NickleDave over 2 years ago - 4 comments
Labels: DOC: documentation

#190 - CLN: Remove `Meta` class, no longer used

Issue - State: closed - Opened by NickleDave over 2 years ago
Labels: CLN: clean/refactor

#189 - DEV: Add .github/ISSUE_TEMPLATE, fixes #188 [skip ci]

Pull Request - State: closed - Opened by NickleDave over 2 years ago

#188 - Add issue templates

Issue - State: closed - Opened by NickleDave over 2 years ago

#187 - Make `crowsetta.formats.as_list` alphabetize the list

Issue - State: closed - Opened by NickleDave over 2 years ago
Labels: ENH: enhancement

#185 - Unpack example data locally

Pull Request - State: closed - Opened by NickleDave over 2 years ago