vivarium-collective/bigraph-schema issues and pull requests

#66 - Add queue and stack types

Issue - State: open - Opened by prismofeverything 6 months ago - 1 comment

#65 - Provide a fold to remove units

Issue - State: open - Opened by prismofeverything 6 months ago

#64 - Validate inputs and outputs to the call to `update()` with the inputs and outputs schema

Issue - State: open - Opened by prismofeverything 6 months ago - 2 comments

#63 - Look for caching during access and view/project

Issue - State: open - Opened by prismofeverything 6 months ago

#62 - A "place" type which is a tree with an additional type parameter for the value of the node

Issue - State: open - Opened by prismofeverything 6 months ago

#61 - Notebook

Pull Request - State: closed - Opened by eagmon 7 months ago

#60 - generate dataclass by registry

Pull Request - State: open - Opened by eagmon 7 months ago

#59 - Remove hydrate_state in favor of making deserialize work in general

Issue - State: closed - Opened by prismofeverything 7 months ago

#58 - hydrate_state removes type keys - we need to be able to use schemas in config

Issue - State: open - Opened by prismofeverything 7 months ago

#57 - Emit needs to call serialize

Issue - State: open - Opened by prismofeverything 8 months ago

#56 - On complete, provide nodes for each unconnected edge input or output

Issue - State: open - Opened by prismofeverything 8 months ago

#55 - core.import for type packages (register multiple definitions)

Issue - State: open - Opened by prismofeverything 8 months ago

#54 - Provide a way to import type packages into core

Issue - State: open - Opened by prismofeverything 8 months ago

#53 - Provide a way to parameterize fold methods

Issue - State: closed - Opened by prismofeverything 8 months ago

#52 - Implement `add_method` to add a new method to existing types

Issue - State: closed - Opened by prismofeverything 8 months ago - 1 comment

#51 - Emitting should be able to be defined based on ports

Issue - State: open - Opened by prismofeverything 8 months ago

#50 - Make apply_schema work with tuple types

Issue - State: closed - Opened by prismofeverything 8 months ago

#49 - fixing fill_ports to get the expected results in bigraph-viz

Pull Request - State: closed - Opened by eagmon 8 months ago

#48 - remove repeated bindings from the schema

Issue - State: closed - Opened by eagmon 8 months ago

#47 - create function for resolving '..' paths

Issue - State: open - Opened by prismofeverything 8 months ago

#46 - add enum type

Issue - State: open - Opened by prismofeverything 8 months ago

#45 - types access raises exception if type_key not found

Pull Request - State: closed - Opened by eagmon 8 months ago - 1 comment

#44 - implement check/serialize/deserialize edge

Issue - State: closed - Opened by prismofeverything 8 months ago

#43 - Move some form of Composite into bigraph-schema

Issue - State: open - Opened by prismofeverything 8 months ago

#42 - update `tree` type to allow a value of its leaf type to be a valid tree

Issue - State: closed - Opened by prismofeverything 8 months ago

#41 - Provide a `_path` key when wiring that allows us to wire ports from the same schema to different places

Issue - State: open - Opened by prismofeverything 8 months ago

#40 - create a way to address the top-level of the tree in a schema (for eg emitter)

Issue - State: closed - Opened by prismofeverything 8 months ago

#39 - keep symbol of function as key in registry in addition to full module name

Issue - State: closed - Opened by prismofeverything 9 months ago

#38 - provide some way to query the type parameters for a given type

Issue - State: closed - Opened by prismofeverything 9 months ago

#37 - Easy register of new types

Issue - State: closed - Opened by eagmon 9 months ago

#36 - wires --> inputs/outputs

Pull Request - State: closed - Opened by prismofeverything 10 months ago

#35 - `check` / `match` / `react`

Pull Request - State: closed - Opened by prismofeverything 10 months ago - 1 comment

#34 - Make all edges have inputs/outputs

Issue - State: closed - Opened by prismofeverything 10 months ago

#33 - feat: updated base_types to include boolean type with functions

Pull Request - State: closed - Opened by AlexPatrie 10 months ago

#32 - Support recursive/self-referential types

Issue - State: closed - Opened by prismofeverything 11 months ago

#31 - Numpy array type

Issue - State: closed - Opened by eagmon about 1 year ago - 1 comment

#30 - make tests for complex wiring

Issue - State: open - Opened by eagmon about 1 year ago