Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / vanvalenlab/deepcell-label issues and pull requests

#51 - scale image display to fill available space

Issue - State: closed - Opened by geneva-miller over 5 years ago - 3 comments

#49 - add keybind to cycle backwards through channels

Issue - State: closed - Opened by geneva-miller over 5 years ago - 2 comments

#49 - add keybind to cycle backwards through channels

Issue - State: closed - Opened by geneva-miller over 5 years ago - 2 comments

#48 - Corrupted .npz file after sending to S3 bucket

Issue - State: closed - Opened by jannieyu over 5 years ago - 3 comments

#48 - Corrupted .npz file after sending to S3 bucket

Issue - State: closed - Opened by jannieyu over 5 years ago - 3 comments

#47 - Update readme with corrected docker instructions

Issue - State: closed - Opened by geneva-miller over 5 years ago - 2 comments

#47 - Update readme with corrected docker instructions

Issue - State: closed - Opened by geneva-miller over 5 years ago - 2 comments

#45 - display channel names

Issue - State: closed - Opened by ngreenwald over 5 years ago - 3 comments
Labels: enhancement

#44 - change watershed to work on currently selected channel

Issue - State: closed - Opened by ngreenwald over 5 years ago - 2 comments

#44 - change watershed to work on currently selected channel

Issue - State: closed - Opened by ngreenwald over 5 years ago - 2 comments

#43 - watershed only works when multiple cells selected

Issue - State: closed - Opened by ngreenwald over 5 years ago - 2 comments

#43 - watershed only works when multiple cells selected

Issue - State: closed - Opened by ngreenwald over 5 years ago - 2 comments

#42 - implement highlight mode for npz mode

Issue - State: closed - Opened by ngreenwald over 5 years ago - 1 comment

#42 - implement highlight mode for npz mode

Issue - State: closed - Opened by ngreenwald over 5 years ago - 1 comment

#41 - zoom in and out

Issue - State: closed - Opened by ngreenwald over 5 years ago - 6 comments
Labels: PRIORITY

#41 - zoom in and out

Issue - State: closed - Opened by ngreenwald over 5 years ago - 6 comments
Labels: PRIORITY

#40 - fixed typo

Pull Request - State: closed - Opened by ngreenwald over 5 years ago - 1 comment

#40 - fixed typo

Pull Request - State: closed - Opened by ngreenwald over 5 years ago - 1 comment

#39 - rendering problems with large images

Issue - State: closed - Opened by ngreenwald over 5 years ago

#38 - display channels and labels simultaneously

Issue - State: closed - Opened by ngreenwald over 5 years ago - 1 comment

#38 - display channels and labels simultaneously

Issue - State: closed - Opened by ngreenwald over 5 years ago - 1 comment

#37 - cell_display info crashes when cell 1 not present

Issue - State: closed - Opened by ngreenwald over 5 years ago - 1 comment

#36 - Feature/trk feature updates

Pull Request - State: closed - Opened by geneva-miller over 5 years ago

#36 - Feature/trk feature updates

Pull Request - State: closed - Opened by geneva-miller over 5 years ago

#34 - fix typo

Pull Request - State: closed - Opened by geneva-miller over 5 years ago

#34 - fix typo

Pull Request - State: closed - Opened by geneva-miller over 5 years ago

#33 - Fix syntax in mode.py

Pull Request - State: closed - Opened by jannieyu over 5 years ago

#32 - 3D features should be ported to track side

Issue - State: closed - Opened by MekWarrior over 5 years ago - 1 comment
Labels: enhancement

#32 - 3D features should be ported to track side

Issue - State: closed - Opened by MekWarrior over 5 years ago - 1 comment
Labels: enhancement

#31 - Feature/zstack editor mode

Pull Request - State: closed - Opened by geneva-miller over 5 years ago - 1 comment

#31 - Feature/zstack editor mode

Pull Request - State: closed - Opened by geneva-miller over 5 years ago - 1 comment

#30 - Dockerize Caliban

Pull Request - State: closed - Opened by jannieyu over 5 years ago - 2 comments

#30 - Dockerize Caliban

Pull Request - State: closed - Opened by jannieyu over 5 years ago - 2 comments

#29 - Readme should have more information for users

Issue - State: closed - Opened by geneva-miller over 5 years ago - 1 comment
Labels: enhancement

#29 - Readme should have more information for users

Issue - State: closed - Opened by geneva-miller over 5 years ago - 1 comment
Labels: enhancement

#28 - Fixes bug with empty tracks persisting in trk file

Pull Request - State: closed - Opened by Tyler4p over 5 years ago

#28 - Fixes bug with empty tracks persisting in trk file

Pull Request - State: closed - Opened by Tyler4p over 5 years ago

#27 - Fill holes in annotation mask

Issue - State: closed - Opened by geneva-miller over 5 years ago - 1 comment

#27 - Fill holes in annotation mask

Issue - State: closed - Opened by geneva-miller over 5 years ago - 1 comment

#26 - Single Frame Swap Feature

Pull Request - State: closed - Opened by Tyler4p over 5 years ago

#26 - Single Frame Swap Feature

Pull Request - State: closed - Opened by Tyler4p over 5 years ago

#25 - Cell highlighting feature

Pull Request - State: closed - Opened by Tyler4p over 5 years ago

#25 - Cell highlighting feature

Pull Request - State: closed - Opened by Tyler4p over 5 years ago

#24 - Fixed bug with screen scaling with large files

Pull Request - State: closed - Opened by Tyler4p over 5 years ago

#24 - Fixed bug with screen scaling with large files

Pull Request - State: closed - Opened by Tyler4p over 5 years ago

#23 - Fixed text formatting in UI prompts

Pull Request - State: closed - Opened by Tyler4p over 5 years ago

#23 - Fixed text formatting in UI prompts

Pull Request - State: closed - Opened by Tyler4p over 5 years ago

#22 - Cell deletion feature

Pull Request - State: closed - Opened by Tyler4p over 5 years ago

#22 - Cell deletion feature

Pull Request - State: closed - Opened by Tyler4p over 5 years ago

#21 - Fixed watershed track creation

Pull Request - State: closed - Opened by Tyler4p over 5 years ago

#21 - Fixed watershed track creation

Pull Request - State: closed - Opened by Tyler4p over 5 years ago

#20 - Add new mask to annotation

Issue - State: closed - Opened by geneva-miller over 5 years ago - 1 comment
Labels: enhancement

#20 - Add new mask to annotation

Issue - State: closed - Opened by geneva-miller over 5 years ago - 1 comment
Labels: enhancement

#19 - Highlight cell

Issue - State: closed - Opened by geneva-miller over 5 years ago - 1 comment
Labels: enhancement

#19 - Highlight cell

Issue - State: closed - Opened by geneva-miller over 5 years ago - 1 comment
Labels: enhancement

#18 - Tracks created by watershed not the same as tracked created with c

Issue - State: closed - Opened by geneva-miller over 5 years ago - 1 comment
Labels: bug

#18 - Tracks created by watershed not the same as tracked created with c

Issue - State: closed - Opened by geneva-miller over 5 years ago - 1 comment
Labels: bug

#17 - Fixed the window server issue

Pull Request - State: closed - Opened by willgraf over 5 years ago

#17 - Fixed the window server issue

Pull Request - State: closed - Opened by willgraf over 5 years ago

#16 - Caliban should never make an empty track

Issue - State: closed - Opened by MekWarrior almost 6 years ago - 2 comments
Labels: bug

#16 - Caliban should never make an empty track

Issue - State: closed - Opened by MekWarrior almost 6 years ago - 2 comments
Labels: bug

#15 - Feature/screen scaling

Pull Request - State: closed - Opened by Tyler4p almost 6 years ago

#15 - Feature/screen scaling

Pull Request - State: closed - Opened by Tyler4p almost 6 years ago

#14 - Color range of annotated labels can now be adjusted via scrolling

Pull Request - State: closed - Opened by Tyler4p about 6 years ago

#13 - Delete annotation option

Issue - State: closed - Opened by geneva-miller about 6 years ago
Labels: enhancement

#13 - Delete annotation option

Issue - State: closed - Opened by geneva-miller about 6 years ago
Labels: enhancement

#12 - Image scaling option and/or larger display

Issue - State: closed - Opened by geneva-miller about 6 years ago - 1 comment
Labels: enhancement

#12 - Image scaling option and/or larger display

Issue - State: closed - Opened by geneva-miller about 6 years ago - 1 comment
Labels: enhancement

#11 - Faster scroll through images option

Issue - State: closed - Opened by geneva-miller about 6 years ago
Labels: enhancement

#11 - Faster scroll through images option

Issue - State: closed - Opened by geneva-miller about 6 years ago
Labels: enhancement

#10 - Scroll wheel also changes LUT of annotations

Issue - State: closed - Opened by geneva-miller about 6 years ago
Labels: enhancement

#9 - add requirements.txt

Pull Request - State: closed - Opened by geneva-miller about 6 years ago

#8 - Investigate Containerization

Issue - State: closed - Opened by MekWarrior about 6 years ago - 1 comment
Labels: enhancement

#7 - Watershed struggles to seperate labels with low contrast raw

Issue - State: closed - Opened by MekWarrior about 6 years ago - 2 comments
Labels: bug, enhancement

#6 - Correct for single pixel segmentation errors

Issue - State: closed - Opened by MekWarrior about 6 years ago - 2 comments
Labels: enhancement

#5 - Text Editing

Issue - State: closed - Opened by MekWarrior about 6 years ago - 1 comment
Labels: enhancement

#4 - Swap cell masks in just one frame

Issue - State: closed - Opened by geneva-miller about 6 years ago - 1 comment
Labels: enhancement

#3 - Watershed clears nearby cell masks

Issue - State: closed - Opened by geneva-miller about 6 years ago - 1 comment
Labels: bug

#2 - Separate non-adjacent cell masks

Issue - State: closed - Opened by geneva-miller about 6 years ago - 1 comment
Labels: enhancement

#1 - Initial commits

Pull Request - State: closed - Opened by MekWarrior about 6 years ago