uw-cmg/MAST-ML issues and pull requests

#250 - Optimize ElementalFeatureGenerator

Pull Request - State: closed - Opened by WillEngler 6 months ago

#249 - Dev lane

Pull Request - State: closed - Opened by leschultz over 1 year ago

#248 - Calibration File for Linear Regression Model

Issue - State: closed - Opened by negiutsav9 about 2 years ago - 1 comment

#247 - Merging dev to master

Pull Request - State: closed - Opened by rjacobs914 over 2 years ago - 1 comment

#246 - merge dev to master

Pull Request - State: closed - Opened by rjacobs914 over 2 years ago - 1 comment

#245 - Merge dev to master

Pull Request - State: closed - Opened by rjacobs914 over 2 years ago - 1 comment

#244 - Dissolve for loop that concatanet string to a Python str.join API as …

Pull Request - State: open - Opened by boneyag over 2 years ago

#243 - UQ Metrics to Consider

Issue - State: open - Opened by leschultz over 2 years ago

#242 - nested CV fails if X_extra is not included in splitter evaluate call

Issue - State: open - Opened by bafflerbach over 2 years ago - 1 comment
Labels: bug

#241 - update tutorials with pip install pyyaml==5.4.1 b/c for some reason i…

Pull Request - State: closed - Opened by rjacobs914 over 2 years ago - 1 comment

#240 - add init.py file

Pull Request - State: open - Opened by Avery2 over 3 years ago

#239 - Add google collab links

Pull Request - State: open - Opened by Avery2 over 3 years ago

#238 - docs: add google colab links in a README

Pull Request - State: closed - Opened by Avery2 over 3 years ago

#237 - docs: add google colab links in a README

Pull Request - State: closed - Opened by Avery2 over 3 years ago

#236 - Splitter Issue

Issue - State: closed - Opened by leschultz over 3 years ago - 2 comments

#235 - Merge dev branch

Pull Request - State: closed - Opened by hlkee over 3 years ago

#234 - Added Feature score and occurrence plots

Pull Request - State: closed - Opened by hlkee over 3 years ago

#233 - Add feature score and occurrence plots

Pull Request - State: closed - Opened by hlkee over 3 years ago

#232 - docs: center status badges

Pull Request - State: open - Opened by Avery2 over 3 years ago

#231 - Parallelization

Pull Request - State: closed - Opened by leschultz over 3 years ago

#230 - Suggestion

Issue - State: closed - Opened by leschultz over 3 years ago - 1 comment

#229 - Adding classification plots

Pull Request - State: closed - Opened by Avery2 over 3 years ago - 1 comment

#228 - Dev ryan 2020 12 21

Pull Request - State: closed - Opened by rjacobs914 almost 4 years ago

#227 - Add files via upload

Pull Request - State: closed - Opened by hlkee almost 4 years ago

#226 - Finish data twins

Pull Request - State: closed - Opened by Avery2 almost 4 years ago

#225 - name 'Composition' is not defined

Issue - State: closed - Opened by ramalakshmiklu almost 4 years ago - 1 comment

#224 - added unit test for LeaveOutTwinCV

Pull Request - State: closed - Opened by Avery2 almost 4 years ago

#223 - Added manual gridding for hyperparamter search

Pull Request - State: closed - Opened by leschultz about 4 years ago

#222 - Nested cross validation

Issue - State: closed - Opened by ddmorgan over 4 years ago - 1 comment

#221 - Some final TODO updates for EnsembleRegressor and RvE plots:

Issue - State: closed - Opened by alexp205 over 4 years ago - 1 comment

#220 - Dev alex 2020 07 20

Pull Request - State: open - Opened by alexp205 over 4 years ago - 6 comments

#219 - Dev ryan 2020 05 11

Pull Request - State: closed - Opened by rjacobs914 over 4 years ago

#218 - Dev ryan 2020 05 11

Pull Request - State: closed - Opened by rjacobs914 over 4 years ago

#217 - Dev ryan 2020 05 11

Pull Request - State: closed - Opened by rjacobs914 over 4 years ago

#216 - Your first MAST-ML run: " ValueError: 'X' and 'missing_values' types are expected to be both numerical. Got X.dtype=float64 and type(missing_values)=<class 'str'>. "

Issue - State: closed - Opened by Andrewwwwwong over 4 years ago - 7 comments

#215 - added init ensemble funcionality, proposed fix for nans issue in erro…

Pull Request - State: closed - Opened by alexp205 over 4 years ago - 2 comments

#214 - MAST-ML Installation

Issue - State: closed - Opened by ghost about 5 years ago - 2 comments

#213 - A runtime exception has occured

Issue - State: closed - Opened by Amir1361 about 5 years ago - 3 comments

#212 - Learning Curve should output final selection of features, or maybe features at all steps?

Issue - State: open - Opened by bafflerbach over 5 years ago
Labels: enhancement

#211 - Dependencies should be added to setup.py

Issue - State: closed - Opened by Nakzz over 5 years ago - 1 comment

#210 - Leave out group fails if a group has 1 member in it

Issue - State: open - Opened by bafflerbach over 5 years ago - 1 comment
Labels: bug

#209 - Installation instructions #207

Pull Request - State: open - Opened by Nakzz over 5 years ago

#208 - MAST-ML tutorial: Your first MAST-ML run

Issue - State: closed - Opened by KennyKangMPC over 5 years ago - 1 comment

#207 - Installation instructions

Issue - State: closed - Opened by mppolak over 5 years ago - 2 comments

#206 - Add complete error estimation framework

Issue - State: open - Opened by ddmorgan over 5 years ago

#205 - clean up requirements in setup.py

Pull Request - State: open - Opened by martin-hunt almost 6 years ago - 2 comments

#204 - Crashing with new CSV output update

Issue - State: closed - Opened by bafflerbach almost 6 years ago - 1 comment

#203 - Allow sklearn scoring object for MASTML Feature Selector

Issue - State: open - Opened by rjacobs914 almost 6 years ago

#202 - Error bar documentation and values

Issue - State: closed - Opened by ddmorgan almost 6 years ago - 1 comment

#201 - simultaneous explicit choice of features and not_input_features is allowed and produces an error instead of telling whats wrong

Issue - State: closed - Opened by mppolak almost 6 years ago - 3 comments

#199 - Check sigma value for model errors vs. calculated errors for error/sigma plots- different sigma values used for purple vs. green data plots?

Issue - State: closed - Opened by rjacobs914 almost 6 years ago - 1 comment

#195 - Lane

Pull Request - State: closed - Opened by leschultz about 6 years ago

#193 - Plot metric vs. size of groups

Issue - State: closed - Opened by rjacobs914 about 6 years ago - 1 comment

#192 - Figures for x/sigma residuals vs. analytic have bad formatting.

Issue - State: closed - Opened by ddmorgan over 6 years ago - 1 comment

#191 - Mixed forward selection method

Issue - State: closed - Opened by ddmorgan over 6 years ago - 1 comment

#189 - Preprocess to remove correlated features

Issue - State: closed - Opened by ddmorgan over 6 years ago - 1 comment

#186 - Add a Jupyter notebook based tool for MASTL to nanohub. Include widgets (needs updating to newest version).

Issue - State: closed - Opened by ddmorgan over 6 years ago - 1 comment

#185 - Add install guidance to documentation (installation file) to cover VisualC++ issue. Ben do this.

Issue - State: open - Opened by ddmorgan over 6 years ago - 2 comments

#174 - For clustering, add k-medoids method. Not in sklearn so will need to use another package, quick google search shows several options

Issue - State: closed - Opened by rjacobs914 over 6 years ago - 4 comments

#164 - Add Bootstrap Method

Issue - State: closed - Opened by ddmorgan over 6 years ago - 6 comments

#156 - In Feature Generation look for unitless combinations of features

Issue - State: open - Opened by bafflerbach over 6 years ago - 1 comment

#155 - Assess error bars by comparing predicted errors vs. cross validation actual errors

Issue - State: closed - Opened by ddmorgan over 6 years ago - 1 comment

#148 - ARD generalization of RBF Gaussian random process approach

Issue - State: closed - Opened by ddmorgan almost 7 years ago - 1 comment

#139 - Establish character limit on input strings and keywords to not have malicious code injection

Issue - State: closed - Opened by rjacobs914 almost 7 years ago - 3 comments

#131 - missingDataMaster

Pull Request - State: closed - Opened by zufw almost 7 years ago

#127 - Minh

Pull Request - State: closed - Opened by quyminh about 7 years ago

#121 - For CV best/worst parity plot add error bars when available (e.g., Gaussian process)

Issue - State: closed - Opened by ddmorgan about 7 years ago - 1 comment

#118 - Add post processing capability to plotting

Issue - State: closed - Opened by bafflerbach about 7 years ago - 2 comments
Labels: Feature Request

#117 - Consider fast hyperparameter optimizer using local optimizer (BFGS? Other) maybe + GA

Issue - State: closed - Opened by ddmorgan over 7 years ago - 1 comment

#116 - Make sure we can optimize hyperparameters every CV step as an option

Issue - State: closed - Opened by ddmorgan over 7 years ago - 1 comment

#113 - Formatting summary page

Issue - State: closed - Opened by ddmorgan over 7 years ago - 1 comment

#105 - fix random for testing may not work in GA

Issue - State: closed - Opened by cmgtam over 7 years ago

#103 - target_error if set fails for extrapolating data

Issue - State: closed - Opened by cmgtam over 7 years ago

#102 - save max error CV test

Issue - State: closed - Opened by cmgtam over 7 years ago - 1 comment

#101 - add mit license to docs

Issue - State: closed - Opened by cmgtam over 7 years ago - 1 comment

#99 - Warn when GA converges to boundary of Grid

Issue - State: closed - Opened by bafflerbach over 7 years ago

#98 - param opt warn for zero population size and doc param_xxx better

Issue - State: closed - Opened by cmgtam over 7 years ago - 2 comments

#96 - create heatmap jupyter notebook

Issue - State: closed - Opened by cmgtam over 7 years ago - 3 comments

#95 - gridsearch jupyter notebook series names

Issue - State: closed - Opened by cmgtam over 7 years ago - 1 comment

#94 - fix random state

Issue - State: closed - Opened by cmgtam over 7 years ago

#91 - add favorites for grid search

Issue - State: closed - Opened by cmgtam over 7 years ago

#88 - include documentation on making custom features.

Issue - State: closed - Opened by bafflerbach over 7 years ago - 1 comment
Labels: Documentation

#86 - cluster plotting fails (fix with user setup)

Issue - State: closed - Opened by cmgtam over 7 years ago - 1 comment

#84 - Add local optimization into GA workflow

Issue - State: closed - Opened by cmgtam over 7 years ago

#83 - Add local optimizer to GA

Issue - State: closed - Opened by cmgtam over 7 years ago

#81 - change GA choices for different parameters

Issue - State: closed - Opened by cmgtam over 7 years ago

#79 - jupyter notebook incomplete ticklabels

Issue - State: closed - Opened by bafflerbach over 7 years ago - 4 comments
Labels: bug

#70 - paramoptga adding columns gives Unnamed columns

Issue - State: closed - Opened by cmgtam over 7 years ago - 1 comment
Labels: bug

#69 - pickle and unpickle model, also to notebook

Issue - State: closed - Opened by cmgtam over 7 years ago - 1 comment
Labels: Feature Request

#57 - Target_error_feature

Issue - State: closed - Opened by ddmorgan over 7 years ago - 2 comments
Labels: bug

#51 - categorical features

Issue - State: closed - Opened by cmgtam over 7 years ago - 1 comment
Labels: Feature Request

#44 - Document output for LeaveOutGroup not writing predicted values for each of the different groups

Issue - State: closed - Opened by cmgtam over 7 years ago - 2 comments
Labels: bug

#42 - PredictionVsFeature crashes if plot_filter_out isn't set

Issue - State: closed - Opened by bafflerbach over 7 years ago - 2 comments
Labels: bug

#40 - doc note multiprocessing and ParamOptGA

Issue - State: closed - Opened by cmgtam over 7 years ago - 1 comment
Labels: Feature Request, notes

#39 - Enable storage and updates of previous models

Issue - State: closed - Opened by bafflerbach over 7 years ago
Labels: Feature Request

#31 - meta-readme at top level as html

Issue - State: closed - Opened by cmgtam over 7 years ago - 1 comment
Labels: Feature Request

#28 - allow precision of printing statistics to change

Issue - State: closed - Opened by cmgtam over 7 years ago - 1 comment
Labels: Feature Request

#16 - dbtt - composition dependent features for optimization

Issue - State: closed - Opened by cmgtam over 7 years ago - 1 comment
Labels: Feature Request

#15 - dbtt - composition dependent p

Issue - State: closed - Opened by cmgtam over 7 years ago - 1 comment
Labels: Feature Request

#12 - look at how we are passing information through the workflow

Issue - State: closed - Opened by cmgtam over 7 years ago - 1 comment
Labels: Feature Request

GitHub / uw-cmg/MAST-ML issues and pull requests