Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / unipept/unipept-cli issues and pull requests
#212 - Bump eslint from 9.17.0 to 9.19.0
Pull Request -
State: closed - Opened by dependabot[bot] 7 days ago
Labels: dependencies
#212 - Bump eslint from 9.17.0 to 9.19.0
Pull Request -
State: closed - Opened by dependabot[bot] 7 days ago
Labels: dependencies
#211 - Bump commander from 12.1.0 to 13.1.0
Pull Request -
State: closed - Opened by dependabot[bot] 7 days ago
Labels: dependencies
#211 - Bump commander from 12.1.0 to 13.1.0
Pull Request -
State: closed - Opened by dependabot[bot] 7 days ago
Labels: dependencies
#210 - Bump typescript-eslint from 8.19.0 to 8.22.0
Pull Request -
State: closed - Opened by dependabot[bot] 7 days ago
Labels: dependencies
#209 - Bump np from 10.1.0 to 10.2.0
Pull Request -
State: closed - Opened by dependabot[bot] 7 days ago
Labels: dependencies
#208 - Bump @eslint/js from 9.18.0 to 9.19.0
Pull Request -
State: closed - Opened by dependabot[bot] 7 days ago
- 1 comment
Labels: dependencies
#208 - Bump @eslint/js from 9.18.0 to 9.19.0
Pull Request -
State: closed - Opened by dependabot[bot] 7 days ago
- 1 comment
Labels: dependencies
#207 - Bump typescript from 5.7.2 to 5.7.3
Pull Request -
State: closed - Opened by dependabot[bot] 7 days ago
Labels: dependencies
#206 - Bump @types/node from 22.10.3 to 22.13.0
Pull Request -
State: closed - Opened by dependabot[bot] 7 days ago
Labels: dependencies
#205 - Bump @eslint/js from 9.17.0 to 9.18.0
Pull Request -
State: closed - Opened by dependabot[bot] 18 days ago
Labels: dependencies
#204 - Bump globals from 15.12.0 to 15.14.0
Pull Request -
State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies
#204 - Bump globals from 15.12.0 to 15.14.0
Pull Request -
State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies
#203 - Bump commander from 12.1.0 to 13.0.0
Pull Request -
State: closed - Opened by dependabot[bot] about 1 month ago
- 1 comment
Labels: dependencies
#202 - Bump eslint from 9.16.0 to 9.17.0
Pull Request -
State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies
#202 - Bump eslint from 9.16.0 to 9.17.0
Pull Request -
State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies
#201 - Bump typescript-eslint from 8.16.0 to 8.19.0
Pull Request -
State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies
#201 - Bump typescript-eslint from 8.16.0 to 8.19.0
Pull Request -
State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies
#200 - Bump @types/node from 22.10.1 to 22.10.3
Pull Request -
State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies
#200 - Bump @types/node from 22.10.1 to 22.10.3
Pull Request -
State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies
#199 - Bump @eslint/js from 9.16.0 to 9.17.0
Pull Request -
State: closed - Opened by dependabot[bot] about 1 month ago
- 1 comment
Labels: dependencies
#199 - Bump @eslint/js from 9.16.0 to 9.17.0
Pull Request -
State: closed - Opened by dependabot[bot] about 1 month ago
- 1 comment
Labels: dependencies
#198 - Bump @eslint/js from 9.15.0 to 9.16.0
Pull Request -
State: closed - Opened by dependabot[bot] 2 months ago
- 1 comment
Labels: dependencies
#197 - Bump eslint from 9.15.0 to 9.16.0
Pull Request -
State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies
#196 - Bump @eslint/js from 9.5.0 to 9.15.0
Pull Request -
State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies
#195 - Bump ts-jest from 29.1.5 to 29.2.5
Pull Request -
State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies
#194 - Bump csv-stringify from 6.5.0 to 6.5.2
Pull Request -
State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies
#193 - Bump @types/jest from 29.5.12 to 29.5.14
Pull Request -
State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies
#192 - Bump eslint from 9.5.0 to 9.15.0
Pull Request -
State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies
#191 - Bump @types/node from 20.14.2 to 22.10.1
Pull Request -
State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies
#190 - Bump globals from 15.6.0 to 15.12.0
Pull Request -
State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies
#189 - Bump np from 10.0.7 to 10.1.0
Pull Request -
State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies
#188 - Bump typescript-eslint from 7.13.1 to 8.16.0
Pull Request -
State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies
#187 - Bump tsx from 4.15.6 to 4.19.2
Pull Request -
State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies
#186 - Bump typescript from 5.4.5 to 5.7.2
Pull Request -
State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies
#185 - Bump cross-spawn from 7.0.3 to 7.0.6
Pull Request -
State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies, javascript
#184 - Bump micromatch from 4.0.7 to 4.0.8
Pull Request -
State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies, javascript
#183 - Properly initialize "link" parameter for `taxa2tree` command
Pull Request -
State: closed - Opened by pverscha 6 months ago
- 1 comment
#182 - New line in the peptide column in unipept pept2lca with input file
Issue -
State: closed - Opened by dwishsan 6 months ago
- 1 comment
Labels: bug
#181 - Finalize implementation
Pull Request -
State: closed - Opened by bmesuere 6 months ago
#180 - Implement all unipept subcommands and tests
Pull Request -
State: closed - Opened by bmesuere 6 months ago
#179 - Add fasta support
Pull Request -
State: closed - Opened by bmesuere 6 months ago
#178 - implement xml and json formatters
Pull Request -
State: closed - Opened by bmesuere 6 months ago
#177 - Add pept2lca
Pull Request -
State: closed - Opened by bmesuere 7 months ago
#176 - Port prot2pept to typescript
Pull Request -
State: closed - Opened by bmesuere 8 months ago
#175 - Port peptfilter to typescript
Pull Request -
State: closed - Opened by bmesuere 8 months ago
#174 - Add linting, testing and type checks
Pull Request -
State: closed - Opened by bmesuere 8 months ago
#173 - Port the uniprot command
Pull Request -
State: closed - Opened by bmesuere 8 months ago
#172 - Reimplement the CLI in TypeScript
Pull Request -
State: closed - Opened by bmesuere 8 months ago
#171 - Drop Ruby 2.7 and add 3.3 support in tests
Pull Request -
State: closed - Opened by bmesuere about 1 year ago
#170 - Bump minitest from 5.18.1 to 5.20.0
Pull Request -
State: closed - Opened by dependabot[bot] over 1 year ago
- 5 comments
Labels: dependencies
#169 - Building the CLI in WSL2 (Ububtu 2204.2.33.0)
Issue -
State: closed - Opened by magnuspalmblad over 1 year ago
- 5 comments
#168 - Bump minitest from 5.18.1 to 5.19.0
Pull Request -
State: closed - Opened by dependabot[bot] over 1 year ago
- 1 comment
Labels: dependencies
#167 - Bump nokogiri from 1.13.10 to 1.15.3
Pull Request -
State: closed - Opened by dependabot[bot] over 1 year ago
- 1 comment
Labels: dependencies
#166 - Add a devcontainer
Pull Request -
State: closed - Opened by bmesuere over 1 year ago
#165 - Bump minitest from 5.18.0 to 5.18.1
Pull Request -
State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies
#164 - Add extra command for the protinfo endpoint
Pull Request -
State: closed - Opened by tibvdm over 1 year ago
- 1 comment
#163 - Bump git from 1.11.0 to 1.18.0
Pull Request -
State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies
#162 - Support ruby 3.2
Pull Request -
State: closed - Opened by bmesuere almost 2 years ago
#161 - Bump rubocop from 1.42.0 to 1.50.2
Pull Request -
State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies
#160 - Bump psych from 5.0.1 to 5.1.0
Pull Request -
State: closed - Opened by dependabot[bot] almost 2 years ago
- 1 comment
Labels: dependencies
#159 - Bump rack from 2.2.3.1 to 3.0.7
Pull Request -
State: closed - Opened by dependabot[bot] almost 2 years ago
- 1 comment
Labels: dependencies
#158 - Bump typhoeus from 1.3.1 to 1.4.0
Pull Request -
State: closed - Opened by dependabot[bot] almost 2 years ago
- 1 comment
Labels: dependencies
#157 - Bump minitest from 5.15.0 to 5.18.0
Pull Request -
State: closed - Opened by dependabot[bot] almost 2 years ago
- 1 comment
Labels: dependencies
#156 - Bump git from 1.8.1 to 1.17.2
Pull Request -
State: closed - Opened by dependabot[bot] almost 2 years ago
- 2 comments
Labels: dependencies
#155 - Bump rack from 2.2.3 to 3.0.6.1
Pull Request -
State: closed - Opened by dependabot[bot] almost 2 years ago
- 1 comment
Labels: dependencies
#154 - Bump rubocop from 1.27.0 to 1.48.1
Pull Request -
State: closed - Opened by dependabot[bot] almost 2 years ago
- 1 comment
Labels: dependencies
#153 - Bump rack from 3.0.4.1 to 3.0.4.2
Pull Request -
State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies
#152 - Bump rubocop from 1.44.1 to 1.47.0
Pull Request -
State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies
#151 - Bump psych from 5.0.2 to 5.1.0
Pull Request -
State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies
#150 - Bump psych from 5.0.1 to 5.0.2
Pull Request -
State: closed - Opened by dependabot[bot] about 2 years ago
Labels: dependencies
#149 - Bump rubocop from 1.42.0 to 1.44.1
Pull Request -
State: closed - Opened by dependabot[bot] about 2 years ago
Labels: dependencies
#148 - Bump rack from 2.2.3.1 to 3.0.4.1
Pull Request -
State: closed - Opened by dependabot[bot] about 2 years ago
Labels: dependencies
#147 - Bump git from 1.11.0 to 1.13.0
Pull Request -
State: closed - Opened by dependabot[bot] about 2 years ago
Labels: dependencies
#146 - Test Ruby 3.2
Pull Request -
State: closed - Opened by bmesuere about 2 years ago
#145 - Bump rubocop from 1.39.0 to 1.42.0
Pull Request -
State: closed - Opened by dependabot[bot] about 2 years ago
Labels: dependencies
#144 - Bump rubocop from 1.39.0 to 1.41.1
Pull Request -
State: closed - Opened by dependabot[bot] about 2 years ago
- 1 comment
Labels: dependencies
#143 - Bump minitest from 5.16.3 to 5.17.0
Pull Request -
State: closed - Opened by dependabot[bot] about 2 years ago
Labels: dependencies
#142 - Bump psych from 4.0.6 to 5.0.1
Pull Request -
State: closed - Opened by dependabot[bot] about 2 years ago
Labels: dependencies
#141 - Bump nokogiri from 1.13.9 to 1.13.10
Pull Request -
State: closed - Opened by dependabot[bot] about 2 years ago
Labels: dependencies
#140 - Bump typhoeus from 1.3.1 to 1.4.0
Pull Request -
State: closed - Opened by dependabot[bot] about 2 years ago
Labels: dependencies
#139 - Bump rubocop from 1.38.0 to 1.39.0
Pull Request -
State: closed - Opened by dependabot[bot] about 2 years ago
Labels: dependencies
#138 - Bump rubocop from 1.36.0 to 1.38.0
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies
#137 - Bump nokogiri from 1.13.6 to 1.13.9
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies
#136 - Bump psych from 4.0.4 to 4.0.6
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies
#135 - Bump rubocop from 1.32.0 to 1.36.0
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies
#134 - Bump minitest from 5.16.2 to 5.16.3
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies
#133 - Bump rubocop from 1.31.2 to 1.32.0
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies
#132 - Bump rubocop from 1.30.0 to 1.31.2
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies
#131 - Bump minitest from 5.15.0 to 5.16.2
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies
#130 - Fix UniProt command
Pull Request -
State: closed - Opened by bmesuere over 2 years ago
#129 - Bump rubocop from 1.30.0 to 1.31.1
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
- 2 comments
Labels: dependencies
#128 - Bump minitest from 5.15.0 to 5.16.1
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
- 2 comments
Labels: dependencies
#127 - Bump rack from 2.2.3 to 2.2.3.1
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies
#126 - Bump psych from 4.0.3 to 4.0.4
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies
#125 - Bump rubocop from 1.28.2 to 1.30.0
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies
#124 - Bump nokogiri from 1.13.4 to 1.13.6
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies
#123 - Should we run prot2pept automatically?
Issue -
State: closed - Opened by pverscha almost 3 years ago
- 1 comment
Labels: enhancement
#122 - Bump rubocop from 1.27.0 to 1.28.2
Pull Request -
State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies
#121 - Bump git from 1.8.1 to 1.11.0
Pull Request -
State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies