Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / undark-lab/swyft issues and pull requests

#149 - Lightning 2.x support

Issue - State: open - Opened by maxwelltsai about 2 months ago
Labels: enhancement

#148 - update autoregressive model

Pull Request - State: closed - Opened by NoemiAM 8 months ago

#146 - Register as buffer Gaussian ratio estimator parameters

Issue - State: open - Opened by NoemiAM about 1 year ago
Labels: bug, enhancement

#145 - Black

Pull Request - State: closed - Opened by cweniger about 1 year ago

#144 - Rc0.4.5

Pull Request - State: closed - Opened by cweniger about 1 year ago

#142 - Feat/better defaults

Pull Request - State: closed - Opened by cweniger about 1 year ago

#140 - Integrate GEDA and Gaussian Autoregressive models

Issue - State: open - Opened by cweniger over 1 year ago - 1 comment
Labels: enhancement

#139 - Combine nested sampler with Swyft infer statement

Issue - State: open - Opened by cweniger over 1 year ago
Labels: enhancement

#138 - Feat/plot cleanup

Pull Request - State: closed - Opened by cweniger over 1 year ago - 1 comment
Labels: consolidation

#137 - Consolidate plotting routines

Issue - State: open - Opened by cweniger over 1 year ago - 4 comments
Labels: consolidation

#136 - Bug fix for labels in corner plot

Pull Request - State: closed - Opened by anchal-009 over 1 year ago

#135 - Add OpenSSF Best Practices Badge

Issue - State: open - Opened by cweniger over 1 year ago
Labels: documentation

#134 - Release/v0.4.4

Pull Request - State: closed - Opened by cweniger over 1 year ago

#133 - Explore network modules that do not require A and B as input.

Issue - State: open - Opened by cweniger over 1 year ago
Labels: enhancement

#132 - Labels don't work in swift.corner

Issue - State: closed - Opened by cweniger over 1 year ago - 1 comment
Labels: bug

#131 - remove ns

Pull Request - State: closed - Opened by NoemiAM over 1 year ago

#130 - How to take samples from the posterior estimate

Issue - State: closed - Opened by GertKl over 1 year ago - 3 comments

#129 - Updates AUTHORS and LICENSE files

Pull Request - State: closed - Opened by cweniger over 1 year ago

#128 - Merge dev branch

Pull Request - State: closed - Opened by cweniger over 1 year ago - 1 comment

#127 - Merge current dev branch into master

Pull Request - State: closed - Opened by cweniger over 1 year ago

#126 - Update setup.cfg - pytorch-lightning <=1.9.5

Pull Request - State: closed - Opened by cweniger over 1 year ago

#125 - Documentation updates (citations, changelog)

Pull Request - State: closed - Opened by cweniger over 1 year ago

#124 - Feat/pl2 compatibility

Pull Request - State: closed - Opened by cweniger over 1 year ago - 1 comment

#123 - Minor documentation updates

Pull Request - State: closed - Opened by cweniger over 1 year ago

#122 - Feat/workshop tutorials

Pull Request - State: closed - Opened by cweniger over 1 year ago

#121 - Update README.rst

Pull Request - State: closed - Opened by cweniger over 1 year ago

#120 - Bug fix for ZarrStore dataloaders split

Pull Request - State: closed - Opened by NoemiAM over 1 year ago

#119 - Add support for pytorch-lightning 2.0.0

Issue - State: open - Opened by cweniger over 1 year ago - 3 comments
Labels: enhancement, help wanted

#118 - Update setup.cfg

Pull Request - State: closed - Opened by cweniger over 1 year ago

#117 - Update tutorial notebooks based on Swyft workshop 2023

Issue - State: closed - Opened by cweniger almost 2 years ago - 2 comments
Labels: documentation

#116 - Add method for diagnostic information for marginal posteriors

Issue - State: open - Opened by cweniger almost 2 years ago
Labels: enhancement

#115 - Merge current dev branch

Pull Request - State: closed - Opened by cweniger almost 2 years ago

#114 - Update README.rst

Pull Request - State: closed - Opened by bkmi almost 2 years ago

#113 - Add volume information to RectBoundSampler

Issue - State: open - Opened by cweniger almost 2 years ago
Labels: enhancement

#112 - Re-enable violin plots for large number of posteriors.

Issue - State: open - Opened by cweniger almost 2 years ago
Labels: enhancement

#111 - Remove necessity of "ax" from plotting routines.

Issue - State: closed - Opened by cweniger almost 2 years ago - 1 comment
Labels: enhancement

#110 - Tracking of individual validation losses

Issue - State: open - Opened by cweniger almost 2 years ago
Labels: enhancement

#109 - Fix plot_zz and plot_pp to deal with N-dim posteriors

Pull Request - State: closed - Opened by cweniger almost 2 years ago

#108 - Correct way to use Dask on a cluster

Issue - State: closed - Opened by GertKl about 2 years ago - 17 comments
Labels: v0.3

#107 - Get marginal classifier with more than one observation key

Issue - State: closed - Opened by erinaldi over 2 years ago - 4 comments
Labels: v0.3

#105 - Enable online data generation and some simulation reuse

Pull Request - State: closed - Opened by adam-coogan over 2 years ago

#104 - improve violin plot parameter labels

Issue - State: closed - Opened by bkmi over 2 years ago
Labels: enhancement

#102 - using custom datasets documentation

Issue - State: closed - Opened by bkmi almost 3 years ago - 1 comment
Labels: documentation, v0.3

#101 - Merging stores

Issue - State: closed - Opened by GertKl almost 3 years ago - 3 comments
Labels: enhancement, v0.3

#100 - incorrect loss for picking best network

Issue - State: closed - Opened by bkmi almost 3 years ago
Labels: bug

#99 - Fix Dask simulator performance issue

Pull Request - State: closed - Opened by fnattino almost 3 years ago - 1 comment

#98 - Truncation - Store does not contain enough samples

Issue - State: closed - Opened by samgagnon almost 3 years ago - 4 comments

#97 - Dask - Long running time and exceeding memory budget

Issue - State: closed - Opened by GertKl almost 3 years ago - 5 comments
Labels: bug

#96 - composite priors do not work in stores

Issue - State: closed - Opened by elidub almost 3 years ago - 3 comments

#94 - Rst vs md

Pull Request - State: closed - Opened by bkmi almost 3 years ago

#93 - create a function for easily combining truncation bounds

Issue - State: closed - Opened by bkmi almost 3 years ago - 1 comment
Labels: v0.3

#92 - update store/simulator notebooks following refactoring

Pull Request - State: closed - Opened by fnattino almost 3 years ago - 2 comments

#91 - store to pytorch dataset feature

Issue - State: closed - Opened by bkmi almost 3 years ago - 1 comment
Labels: enhancement, v0.3

#89 - create a weighted samples dataclass

Issue - State: closed - Opened by bkmi almost 3 years ago - 1 comment
Labels: enhancement

#88 - fix stochastic behavior in simulator test

Pull Request - State: closed - Opened by rogerkuou almost 3 years ago

#87 - simulator test still not passing (sometimes)

Issue - State: closed - Opened by bkmi almost 3 years ago - 1 comment

#86 - Add random state for reproducibility

Pull Request - State: closed - Opened by fnattino almost 3 years ago - 6 comments
Labels: enhancement

#85 - remove unstable simulator tests

Pull Request - State: closed - Opened by fnattino almost 3 years ago

#84 - Refactor directory/memory stores as single objects

Pull Request - State: closed - Opened by fnattino almost 3 years ago - 3 comments

#83 - reintroduce codecov badge, increase percentage, AKA make tests!

Issue - State: closed - Opened by bkmi about 3 years ago - 3 comments

#82 - The future of swyft

Pull Request - State: closed - Opened by bkmi about 3 years ago - 1 comment

#81 - added eScience examples Ext. Sim, Dir. Store, Dask Sim

Pull Request - State: closed - Opened by meiertgrootes about 3 years ago - 3 comments

#80 - make ensemble predictions simple, in an effort to produce more conservative posterior approimations

Issue - State: open - Opened by bkmi about 3 years ago - 2 comments
Labels: enhancement

#79 - Double check for head, type, second should be tail

Issue - State: closed - Opened by CHBKoenders about 3 years ago - 1 comment

#78 - Small difference between actual loss and defined loss

Issue - State: closed - Opened by CHBKoenders about 3 years ago - 3 comments

#77 - Fix simulator test warnings

Pull Request - State: closed - Opened by fnattino about 3 years ago - 3 comments

#76 - warnings / assertions in simulator test (and folder left behind)

Issue - State: closed - Opened by bkmi about 3 years ago - 4 comments

#75 - Fix unit test

Pull Request - State: closed - Opened by rogerkuou about 3 years ago - 4 comments

#74 - Simulator and store clean up

Pull Request - State: closed - Opened by fnattino about 3 years ago - 8 comments

#73 - remove interpolated specification of prior

Issue - State: closed - Opened by bkmi about 3 years ago - 4 comments
Labels: v0.3

#72 - support dependent priors

Issue - State: closed - Opened by bkmi about 3 years ago - 3 comments
Labels: v0.3

#71 - example for eScience contributions

Issue - State: closed - Opened by bkmi about 3 years ago - 2 comments

#70 - eScience contribution double check tests

Issue - State: closed - Opened by bkmi about 3 years ago - 3 comments

#69 - Clean up store and simulator

Issue - State: closed - Opened by fnattino about 3 years ago

#68 - review checklist + submit paper

Issue - State: closed - Opened by bkmi about 3 years ago
Labels: documentation, enhancement

#67 - Long term saving and loading standards - using TorchScript?

Issue - State: open - Opened by bkmi about 3 years ago - 1 comment
Labels: enhancement

#66 - error handling in store

Issue - State: closed - Opened by bkmi about 3 years ago - 1 comment

#64 - HDI ValueError in plot.py

Issue - State: closed - Opened by CHBKoenders about 3 years ago - 2 comments
Labels: v0.3

#63 - Make Head and Tail networks simpler.

Issue - State: closed - Opened by cweniger about 3 years ago - 1 comment
Labels: enhancement

#62 - Add TransformedDataset class in order to enable inference for stochastic states

Issue - State: closed - Opened by cweniger about 3 years ago - 1 comment
Labels: enhancement, v0.3

#61 - zarr storage is slow

Issue - State: closed - Opened by bkmi about 3 years ago - 9 comments
Labels: v0.3

#60 - RuntimeError in Examples - 1. Head networks

Issue - State: closed - Opened by samgagnon over 3 years ago - 3 comments

#59 - rewrite git history to remove jupyter notebook outputs

Issue - State: open - Opened by bkmi over 3 years ago - 1 comment
Labels: enhancement, help wanted, good first issue

#58 - Potential storage corruption of the storage

Issue - State: closed - Opened by rogerkuou over 3 years ago - 3 comments
Labels: v0.3

#57 - Using different models in the same zarr storage?

Issue - State: closed - Opened by rogerkuou over 3 years ago - 1 comment
Labels: v0.3

#56 - Issue/30

Pull Request - State: closed - Opened by rogerkuou over 3 years ago - 2 comments

#55 - add pnames argument and attribute to DaskSimulator

Pull Request - State: closed - Opened by fnattino over 3 years ago

#54 - `DaskSimulator` is missing the `pnames` attribute

Issue - State: closed - Opened by fnattino over 3 years ago

#53 - Empirical mass and improved plotting

Pull Request - State: closed - Opened by cweniger over 3 years ago - 3 comments

#52 - Clarify types

Issue - State: closed - Opened by bkmi over 3 years ago - 1 comment

#51 - Clean up utils directory

Issue - State: closed - Opened by cweniger over 3 years ago - 2 comments

#50 - Couple Dynesty Bound objects to swyft.Bound objects and clean up definitions

Issue - State: closed - Opened by cweniger over 3 years ago - 1 comment

#49 - Add convenience functions for most common priors

Issue - State: closed - Opened by cweniger over 3 years ago - 1 comment

#48 - Add UID to store and dataset

Issue - State: closed - Opened by cweniger over 3 years ago

#47 - Finalize and integrate DaskSimulator with DataStore

Issue - State: closed - Opened by cweniger over 3 years ago - 2 comments

#46 - introduce new numpy random_state, especially in store, for reproducibility

Issue - State: open - Opened by bkmi over 3 years ago - 2 comments
Labels: enhancement

#45 - safety check on store and simulator consistency

Issue - State: closed - Opened by bkmi over 3 years ago