Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / uncbiag/mermaid issues and pull requests

#153 - Consensus Algorithm

Issue - State: open - Opened by EricZimmermann about 1 year ago

#152 - Modify the image size

Issue - State: open - Opened by ChangQingScq over 1 year ago

#151 - bad result

Issue - State: open - Opened by degilala over 1 year ago - 2 comments

#149 - Must I0 and I1 be resampled to the same spacing before registration?

Issue - State: closed - Opened by Confusedisprecious over 2 years ago - 1 comment

#148 - How to write to nifti file?

Issue - State: closed - Opened by colddie over 2 years ago - 2 comments

#147 - force registration running on CPU

Issue - State: closed - Opened by colddie over 2 years ago - 1 comment

#146 - Config files into wheel

Pull Request - State: closed - Opened by HastingsGreer over 2 years ago

#145 - prune requirements

Pull Request - State: open - Opened by HastingsGreer over 2 years ago

#144 - Update minimum pytorch version for new fft spec

Pull Request - State: closed - Opened by HastingsGreer almost 3 years ago

#143 - Experimental: remove dependency on conda and publish on pypi?

Pull Request - State: closed - Opened by HastingsGreer almost 3 years ago

#142 - Accept any pytorch between 1.4 and 1.8

Pull Request - State: closed - Opened by HastingsGreer almost 3 years ago

#141 - switch documentation version of pytorch to 1.4

Pull Request - State: closed - Opened by HastingsGreer almost 3 years ago

#140 - Get Travis testing online

Pull Request - State: closed - Opened by HastingsGreer almost 3 years ago

#139 - reference paper

Issue - State: closed - Opened by cs123951 about 3 years ago - 2 comments

#138 - Does it support Cross-modal image registration?

Issue - State: closed - Opened by uchihatashi about 3 years ago - 1 comment

#137 - Simplify scale_map so that it doesn't depend on spacing

Pull Request - State: closed - Opened by HastingsGreer over 3 years ago

#136 - where is the test2d_tst.json?

Issue - State: closed - Opened by imzhangyd almost 4 years ago - 2 comments

#135 - Add Zenodo badge for citation

Issue - State: open - Opened by thewtex almost 4 years ago

#133 - Map (vector image) is not properly read by fileio

Issue - State: open - Opened by xhs400 over 4 years ago

#131 - Spatial transformer network understanding

Issue - State: closed - Opened by riccardosamperna over 4 years ago - 2 comments

#130 - energies should not be invariant to batch-size

Issue - State: closed - Opened by marcniethammer almost 6 years ago - 1 comment

#129 - wrong inverse map

Issue - State: closed - Opened by wildphoton almost 6 years ago - 2 comments

#128 - flipped spacing in ImageIO

Issue - State: closed - Opened by wildphoton almost 6 years ago - 1 comment

#127 - multi_scale optimizer can't register image to itself

Issue - State: closed - Opened by xhs400 almost 6 years ago - 1 comment

#126 - New tv norm

Pull Request - State: closed - Opened by marcniethammer almost 6 years ago

#125 - New kernel

Pull Request - State: closed - Opened by marcniethammer about 6 years ago

#124 - Better support to create publication figures.

Pull Request - State: closed - Opened by marcniethammer about 6 years ago

#123 - pytorch >0.3.0

Issue - State: closed - Opened by marcniethammer about 6 years ago

#122 - Improved synth data generation

Pull Request - State: closed - Opened by marcniethammer about 6 years ago

#121 - Issue with spacing for upsampling and downsampling

Issue - State: closed - Opened by marcniethammer about 6 years ago - 1 comment

#120 - Improved synth data generation

Pull Request - State: closed - Opened by marcniethammer about 6 years ago

#119 - Python3

Pull Request - State: closed - Opened by marcniethammer about 6 years ago

#118 - Now supporting inverse map computation in forward pass.

Pull Request - State: closed - Opened by marcniethammer about 6 years ago

#117 - Marc test new omt

Pull Request - State: closed - Opened by marcniethammer about 6 years ago

#116 - Two d experiments

Pull Request - State: closed - Opened by marcniethammer about 6 years ago

#113 - Consensus optimization

Pull Request - State: closed - Opened by marcniethammer about 6 years ago

#112 - Now supports other datasets for validation.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#111 - Now allows setting an initial map.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#110 - Now supports integrating to arbitrary times.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#109 - Fixed small issue with writer.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#108 - Consensus optimization

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#107 - Run script; batch-size 2 and improved validation script.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#106 - Modified description for how-to-file.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#105 - Consensus optimization

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#104 - Consensus optimization

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#103 - Consensus optimization

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#102 - Cleaned up files in the experiment directory.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#101 - Consensus optimization

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#100 - Consensus optimization

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#99 - Consensus optimization

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#98 - Consensus optimization

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#97 - Consensus optimization

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#96 - Small fixes for testing

Pull Request - State: closed - Opened by StephanieHaeger over 6 years ago

#95 - Clear model function for atlas builder

Issue - State: closed - Opened by StephanieHaeger over 6 years ago - 1 comment

#94 - Fixed issues in the validation code.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#93 - Fixed indexing issue that created incorrect boxplot comparisons.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#92 - Consensus optimization

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#91 - Added validation mat files.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#90 - Modified OMT implementation to normalized format.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#89 - Consensus optimization

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#88 - Consensus optimization

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#87 - Fixed GPU visualization issue.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#86 - Added some validation code.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#85 - Visualization code for batch results.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#84 - First version of visualization for multi-stage output.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#83 - CUDA FFT and odd last dimension

Issue - State: closed - Opened by marcniethammer over 6 years ago - 1 comment

#82 - Consensus optimization

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#81 - Quick hack to have FFTs work properly on GPU.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#80 - Consensus optimization

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#79 - Setting nans to zero when reading.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#78 - Consensus optimization

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#77 - Properly suppress the output.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#76 - Consensus optimization

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#75 - Added intial version of validation code.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#74 - Consensus optimization

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#73 - Allow writing out optimized parameters into output json file.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#72 - Some improved smoother functionality.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#71 - Fixed small issue with smoother.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#70 - Fixed some minor issues with up and downsampling and spacing.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#69 - Fixed visualization script (for consensus optimization).

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#68 - Added missing 1D and 3D code (*slow*) for lNCC.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#67 - Some more changes to the optimizer.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#65 - Fixed new bug in consensus optimization.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#64 - Improvements to the batch optimizer.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#63 - Batch-based optimizer working.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#62 - Some fixes.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#61 - Consensus optimization

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#60 - Deep encoder_decoder smoother now supports batch normalization.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#59 - Fixed paramter setting before optimization.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#58 - Allow setting parameters from simple interface.

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#42 - Gaussian kernel learning

Pull Request - State: closed - Opened by marcniethammer over 6 years ago

#35 - interpolations

Issue - State: closed - Opened by marcniethammer over 6 years ago - 1 comment

#32 - Better similarity measures

Pull Request - State: closed - Opened by marcniethammer over 6 years ago